Guide to the Human Genome
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Name: SH3BP2 Sequence: fasta or formatted (618aa) NCBI GI: 224994221
Description:

SH3-domain binding protein 2 isoform b

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [561aa] SH3-domain binding protein 2 isoform a
alt prot [561aa] SH3-domain binding protein 2 isoform a
alt prot [589aa] SH3-domain binding protein 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         51           4
 C cysteine            1.6         10           1
 D aspartate           5.0         31           2
 E glutamate           6.5         40           3
 F phenylalanine       3.9         24           2
 G glycine             6.5         40           2
 H histidine           3.1         19           1
 I isoleucine          2.1         13           2
 K lysine              5.5         34           2
 L leucine             6.8         42           3
 M methionine          2.6         16           1
 N asparagine          1.9         12           2
 P proline            14.4         89           5
 Q glutamine           1.9         12           1
 R arginine            7.3         45           2
 S serine              9.4         58           3
 T threonine           4.5         28           2
 V valine              4.7         29           2
 W tryptophan          1.5          9           1
 Y tyrosine            2.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH3-domain binding protein 2 isoform b 
SH3BP2                0.911   SH3-domain binding protein 2 isoform c 
SH3BP2                0.903   SH3-domain binding protein 2 isoform a 
SH3BP2                0.903   SH3-domain binding protein 2 isoform a 
WASF1                 0.033   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.033   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.033   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.033   Wiskott-Aldrich syndrome protein family member 1 [Hom...
NACA                  0.031   nascent polypeptide-associated complex alpha subuni...
NHSL1                 0.030   NHS-like 1 
FLJ22184              0.030   PREDICTED: hypothetical protein LOC80164 
MLL4                  0.030   myeloid/lymphoid or mixed-lineage leukemia 4 
KIAA0754              0.030   hypothetical protein LOC643314 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
WIPF1                 0.027   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.027   WAS/WASL interacting protein family, member 1 
ZNF828                0.027   zinc finger protein 828 
TNK2                  0.027   tyrosine kinase, non-receptor, 2 isoform 1 
TNK2                  0.027   tyrosine kinase, non-receptor, 2 isoform 2 
SFPQ                  0.027   splicing factor proline/glutamine rich (polypyrimidin...
TTN                   0.026   titin isoform N2-A 
WIPF3                 0.026   WAS/WASL interacting protein family, member 3 [Homo...
RERE                  0.026   atrophin-1 like protein isoform b 
RERE                  0.026   atrophin-1 like protein isoform a 
RERE                  0.026   atrophin-1 like protein isoform a 
PRG4                  0.025   proteoglycan 4 isoform D 
PRG4                  0.025   proteoglycan 4 isoform C 
PRG4                  0.025   proteoglycan 4 isoform B 
PRG4                  0.025   proteoglycan 4 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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