NPHP1 10455

Name: NPHP1	Sequence: fasta or formatted (614aa)		NCBI GI: 189491778
Description: nephrocystin 1 isoform 4		Referenced in: Kidney Non-Receptor Tyrosine Kinase Pathways
Other entries for this name: alt prot [732aa] nephrocystin 1 isoform 2 alt prot [677aa] nephrocystin 1 isoform 3 alt prot [733aa] nephrocystin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 32 1 C cysteine 1.1 7 1 D aspartate 5.4 33 1 E glutamate 10.7 66 6 F phenylalanine 3.6 22 1 G glycine 5.9 36 2 H histidine 1.8 11 1 I isoleucine 4.7 29 1 K lysine 5.0 31 2 L leucine 11.9 73 2 M methionine 2.3 14 1 N asparagine 2.9 18 1 P proline 5.4 33 2 Q glutamine 5.0 31 2 R arginine 6.5 40 3 S serine 8.3 51 2 T threonine 5.4 33 2 V valine 4.9 30 1 W tryptophan 2.0 12 2 Y tyrosine 2.0 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nephrocystin 1 isoform 4 NPHP1 0.951 nephrocystin 1 isoform 3 NPHP1 0.889 nephrocystin 1 isoform 2 NPHP1 0.877 nephrocystin 1 isoform 1 ITSN2 0.027 intersectin 2 isoform 3 ITSN2 0.027 intersectin 2 isoform 1 ITSN2 0.027 intersectin 2 isoform 2 RPGR 0.025 retinitis pigmentosa GTPase regulator isoform C [Hom... CRK 0.025 v-crk sarcoma virus CT10 oncogene homolog isoform a ... CRK 0.024 v-crk sarcoma virus CT10 oncogene homolog isoform b ... CRKL 0.023 v-crk sarcoma virus CT10 oncogene homolog (avian)-lik... CENPB 0.023 centromere protein B SH3PXD2A 0.022 SH3 multiple domains 1 CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.022 cell division cycle 2-like 1 (PITSLRE proteins) isof... LOXHD1 0.022 lipoxygenase homology domains 1 isoform 1 TTBK1 0.022 tau tubulin kinase 1 PSTPIP1 0.021 proline-serine-threonine phosphatase interacting pro... CDC2L2 0.021 cell division cycle 2-like 2 isoform 4 CDC2L2 0.021 cell division cycle 2-like 2 isoform 1 CDC2L1 0.020 cell division cycle 2-like 1 (PITSLRE proteins) isof... TEC 0.020 tec protein tyrosine kinase SKAP2 0.020 src kinase associated phosphoprotein 2 MYT1 0.019 myelin transcription factor 1 ABI2 0.019 abl interactor 2 RANGAP1 0.019 Ran GTPase activating protein 1 TRIP10 0.019 thyroid hormone receptor interactor 10 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.