Guide to the Human Genome
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Name: SKAP1 Sequence: fasta or formatted (359aa) NCBI GI: 115527074
Description:

src kinase associated phosphoprotein 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {358aa} src kinase associated phosphoprotein 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         17           3
 C cysteine            1.4          5           1
 D aspartate           9.2         33           2
 E glutamate          12.5         45           5
 F phenylalanine       3.9         14           2
 G glycine             7.5         27           2
 H histidine           1.9          7           1
 I isoleucine          4.5         16           1
 K lysine              5.6         20           2
 L leucine             8.6         31           2
 M methionine          1.1          4           1
 N asparagine          1.9          7           1
 P proline             3.9         14           1
 Q glutamine           4.7         17           2
 R arginine            5.6         20           2
 S serine              8.1         29           2
 T threonine           3.6         13           2
 V valine              3.9         14           2
 W tryptophan          2.2          8           2
 Y tyrosine            5.0         18           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   src kinase associated phosphoprotein 1 isoform 1 [H... 
SKAP1                 0.992   src kinase associated phosphoprotein 1 isoform 2 [H...
SKAP2                 0.376   src kinase associated phosphoprotein 2 
CNKSR1                0.045   connector enhancer of kinase suppressor of Ras 1 [H...
CD2AP                 0.043   CD2-associated protein 
IPCEF1                0.040   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.040   phosphoinositide-binding protein PIP3-E isoform 1 [...
IPCEF1                0.040   phosphoinositide-binding protein PIP3-E isoform 2 [H...
CNKSR2                0.040   connector enhancer of kinase suppressor of Ras 2 [Ho...
SH3YL1                0.038   SH3 domain containing, Ysc84-like 1 isoform 2 [Homo...
C1orf113              0.038   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.038   SH3 domain-containing protein C1orf113 isoform 2 [H...
MAP3K9                0.038   mitogen-activated protein kinase kinase kinase 9 [Ho...
SH3YL1                0.035   SH3 domain containing, Ysc84-like 1 isoform 1 [Homo...
MYO10                 0.035   myosin X 
SWAP70                0.033   SWAP-70 protein 
SH3BP2                0.031   SH3-domain binding protein 2 isoform b 
SH3BP2                0.031   SH3-domain binding protein 2 isoform c 
SH3BP2                0.031   SH3-domain binding protein 2 isoform a 
SH3BP2                0.031   SH3-domain binding protein 2 isoform a 
NPHP1                 0.031   nephrocystin 1 isoform 4 
NPHP1                 0.031   nephrocystin 1 isoform 3 
NPHP1                 0.031   nephrocystin 1 isoform 2 
NPHP1                 0.031   nephrocystin 1 isoform 1 
ABI2                  0.031   abl interactor 2 
RASGRF1               0.031   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.031   Ras protein-specific guanine nucleotide-releasing fa...
ITSN1                 0.031   intersectin 1 isoform ITSN-s 
ITSN1                 0.031   intersectin 1 isoform ITSN-l 
PPP1R13B              0.031   apoptosis-stimulating protein of p53, 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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