Guide to the Human Genome
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Search of human proteins with 110624768

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110624768 hypothetical protein LOC283777 [Homo sapiens]
         (192 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110624768 hypothetical protein LOC283777 [Homo sapiens]            403   e-113
gi|153792633 hypothetical protein LOC26049 [Homo sapiens]             102   2e-22
gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo sapi...    35   0.051
gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]    34   0.087
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            32   0.33 
gi|102467235 inner centromere protein antigens 135/155kDa isofor...    30   0.97 
gi|102467242 inner centromere protein antigens 135/155kDa isofor...    30   0.97 
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa...    30   1.3  
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap...    30   1.3  
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap...    30   1.3  
gi|46409304 glutamate-rich 1 [Homo sapiens]                            30   1.6  
gi|197276594 RNA binding motif protein 20 [Homo sapiens]               29   2.8  
gi|7019371 TCF3 (E2A) fusion partner [Homo sapiens]                    29   2.8  
gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens]        29   2.8  
gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]                28   3.7  
gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Hom...    28   3.7  
gi|170763508 general transcription factor IIIC, polypeptide 5 is...    28   3.7  
gi|170763506 general transcription factor IIIC, polypeptide 5 is...    28   3.7  
gi|126091152 cubilin [Homo sapiens]                                    28   4.8  
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    28   4.8  
gi|197100900 iroquois homeobox 2 [Homo sapiens]                        28   4.8  
gi|39930475 iroquois homeobox 2 [Homo sapiens]                         28   4.8  
gi|239751227 PREDICTED: hypothetical protein XP_002347761 [Homo ...    28   6.3  
gi|48255913 tripartite motif-containing 16 [Homo sapiens]              28   6.3  
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]     28   6.3  
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]      28   6.3  
gi|54292117 ADAM metallopeptidase domain 28 isoform 3 preproprot...    27   8.2  
gi|98985828 ADAM metallopeptidase domain 28 isoform 1 preproprot...    27   8.2  
gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]        27   8.2  

>gi|110624768 hypothetical protein LOC283777 [Homo sapiens]
          Length = 192

 Score =  403 bits (1035), Expect = e-113
 Identities = 192/192 (100%), Positives = 192/192 (100%)

Query: 1   MKVQSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRRGAAVGFYTTKM 60
           MKVQSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRRGAAVGFYTTKM
Sbjct: 1   MKVQSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRRGAAVGFYTTKM 60

Query: 61  KGRLCGDGTGACYLLPVFDTVFIRRKHWHRGLGTAMLRDFCETFPEDEALGVSCSMSPAM 120
           KGRLCGDGTGACYLLPVFDTVFIRRKHWHRGLGTAMLRDFCETFPEDEALGVSCSMSPAM
Sbjct: 61  KGRLCGDGTGACYLLPVFDTVFIRRKHWHRGLGTAMLRDFCETFPEDEALGVSCSMSPAM 120

Query: 121 YQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPECGVEEEDAGLA 180
           YQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPECGVEEEDAGLA
Sbjct: 121 YQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPECGVEEEDAGLA 180

Query: 181 GQPPGKLTRSSP 192
           GQPPGKLTRSSP
Sbjct: 181 GQPPGKLTRSSP 192


>gi|153792633 hypothetical protein LOC26049 [Homo sapiens]
          Length = 670

 Score =  102 bits (255), Expect = 2e-22
 Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 10/135 (7%)

Query: 2   KVQSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRRGAAVGFYTTKMK 61
           +V + GERVVL++LN II+ + E  ++ +++ FL HS  + AKILW++G A+GFY+ K  
Sbjct: 106 QVSTLGERVVLYVLNRIIYRKQE--MERNEIPFLCHSSTDYAKILWKKGEAIGFYSVKPT 163

Query: 62  GRLCGDGTGACYLLPVFDTVFIRRKHWHRGLGTAMLRDFCETFPEDEALGVSCSMSPAMY 121
           G +C       Y LPV DT+F+R+K+  +  G  ML DF ++F ED ALG+   +S  MY
Sbjct: 164 GSICASFLTQSYQLPVLDTMFLRKKYRGKDFGLHMLEDFVDSFTED-ALGLRYPLSSLMY 222

Query: 122 QA-------HPGNSE 129
            A       +PG+ E
Sbjct: 223 TACKQYFEKYPGDHE 237


>gi|215490134 hypothetical protein LOC286223 isoform 2 [Homo
           sapiens]
          Length = 183

 Score = 34.7 bits (78), Expect = 0.051
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 139 QNDRPRQPAPGDGSKERMCGEELED-TKDDPECGVEEEDAGLAGQP 183
           ++ RPR+P PG G+++      L+D T+ DP  G +   A  AG P
Sbjct: 61  EDKRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPP 106


>gi|50080156 hypothetical protein LOC286223 isoform 1 [Homo sapiens]
          Length = 202

 Score = 33.9 bits (76), Expect = 0.087
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 142 RPRQPAPGDGSKERMCGEELED-TKDDPECGVEEEDAGLAGQP 183
           RPR+P PG G+++      L+D T+ DP  G +   A  AG P
Sbjct: 83  RPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPP 125


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 32.0 bits (71), Expect = 0.33
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 117 SPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDG-----SKERMCGEELEDTKDDPECG 171
           +P      PG +E  SR  R         PAPG G     S+ R  G          +  
Sbjct: 215 APPARVREPGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAA 274

Query: 172 VEEEDAGLAGQPPGKLTRSSP 192
                 G  G+ PG L R++P
Sbjct: 275 APRAPGGGGGRNPGALGRAAP 295


>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
           [Homo sapiens]
          Length = 918

 Score = 30.4 bits (67), Expect = 0.97
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 103 TFPEDEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELE 162
           ++P ++    + + +P    + P       + A+T Q D PR+P P    ++R   + + 
Sbjct: 400 SWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTDQADGPREP-PQSARRKRSYKQAVS 458

Query: 163 DTKDDPECGVEEEDAGLAGQPPGKLTRSSP 192
           +   D E  +E+E+     QPP   T SSP
Sbjct: 459 EL--DEEQHLEDEEL----QPPRSKTPSSP 482


>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
           [Homo sapiens]
          Length = 914

 Score = 30.4 bits (67), Expect = 0.97
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 7/90 (7%)

Query: 103 TFPEDEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELE 162
           ++P ++    + + +P    + P       + A+T Q D PR+P P    ++R   + + 
Sbjct: 400 SWPHNDTEIANSTPNPKPAASSPETPSAGQQEAKTDQADGPREP-PQSARRKRSYKQAVS 458

Query: 163 DTKDDPECGVEEEDAGLAGQPPGKLTRSSP 192
           +   D E  +E+E+     QPP   T SSP
Sbjct: 459 EL--DEEQHLEDEEL----QPPRSKTPSSP 482


>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
            sapiens]
          Length = 1819

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 115  SMSPAMYQAHPGNSEDVSRH-ARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPECGVE 173
            S+S  +     G++ED+S +    SQ D   Q +PG G       EE E +  + + G +
Sbjct: 1364 SVSEELGPGRSGDTEDLSPNWPLNSQEDTAAQSSPGRG-------EEAEASAAEAQGGEQ 1416

Query: 174  EEDAGLAGQ 182
               AGLAGQ
Sbjct: 1417 AYLAGLAGQ 1425


>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
           sapiens]
          Length = 858

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 4   QSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRR 49
           Q+FGE  V     A++  R  + + DD +FFL    KEQAK L RR
Sbjct: 365 QTFGELEVW----AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRR 406


>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
           sapiens]
          Length = 871

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)

Query: 4   QSFGERVVLFILNAIIFGRLERNLDDDDMFFLPHSVKEQAKILWRR 49
           Q+FGE  V     A++  R  + + DD +FFL    KEQAK L RR
Sbjct: 371 QTFGELEVW----AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRR 412


>gi|46409304 glutamate-rich 1 [Homo sapiens]
          Length = 443

 Score = 29.6 bits (65), Expect = 1.6
 Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 11/102 (10%)

Query: 91  GLGTAMLRDFCETFPEDEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGD 150
           G+G A   D  +T  ED  L        A  +      E+    A      R RQ    D
Sbjct: 201 GVGEACEEDGVDTSEEDPTL--------AGEEDVKDTREEDGADASEEDLTRARQEEGAD 252

Query: 151 GSKERMCGEELEDTKDD-PECGVE--EEDAGLAGQPPGKLTR 189
            S+E       ED KD   E GV+  EED   AG+  GK TR
Sbjct: 253 ASEEDPTPAGEEDVKDAREEDGVDTIEEDLTRAGEEDGKDTR 294


>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
          Length = 1227

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 113 SCSMS---PAMYQAHPGNSEDVSRHARTSQNDRPRQPAP----GDGSKERM 156
           SCS S   P   +A  GN  D   H+  ++ +  R PAP    GD  ++RM
Sbjct: 654 SCSSSHSPPGPSRADWGNGRDSWEHSPYARREEERDPAPWRDNGDDKRDRM 704


>gi|7019371 TCF3 (E2A) fusion partner [Homo sapiens]
          Length = 253

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)

Query: 106 EDEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKER 155
           EDE    + + +P   +  P   E +S   RT     P  PAPG+G   R
Sbjct: 141 EDEGSQGTDAPTPGNAENEPPEKETLSPPRRTPAPPEPGSPAPGEGPSGR 190


>gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens]
          Length = 451

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 10/69 (14%)

Query: 125 PGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPE--------CGVEEED 176
           P   ED     +T     P +P PG GS+    G+E E     PE            +ED
Sbjct: 13  PTTVEDCDSTWQTDSEPEPEEPGPGGGSEGP--GQESEQPAQPPEQAGGRPGASPAPDED 70

Query: 177 AGLAGQPPG 185
           A  AG   G
Sbjct: 71  AEAAGAEQG 79


>gi|33598960 alpha-2B-adrenergic receptor [Homo sapiens]
          Length = 450

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 146 PAPGDGSKERMCGEELEDTKDDPECGVEEED 176
           P  G G KE +CG   ED  ++ E   EEE+
Sbjct: 278 PNSGQGQKEGVCGASPEDEAEEEEEEEEEEE 308


>gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Homo
           sapiens]
          Length = 802

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 123 AHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTKDDPECG 171
           A  G +  +   +     DR  +PAPGD S+E    E   DT+++P  G
Sbjct: 229 AREGKASGMEARSVEMSGDRVSRPAPGD-SREGDWSEPRLDTQEEPPLG 276


>gi|170763508 general transcription factor IIIC, polypeptide 5
           isoform 1 [Homo sapiens]
          Length = 526

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 136 RTSQNDRPR---QPAPGDGSKERMCGEELEDTKDDPECGVEEED 176
           +T ++ RP      A  DG KE++  E  ED +D+ E   EEED
Sbjct: 464 QTIRSKRPALFSSSAKADGGKEQLTYESGEDEEDEEEEEEEEED 507


>gi|170763506 general transcription factor IIIC, polypeptide 5
           isoform 2 [Homo sapiens]
          Length = 519

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 136 RTSQNDRPR---QPAPGDGSKERMCGEELEDTKDDPECGVEEED 176
           +T ++ RP      A  DG KE++  E  ED +D+ E   EEED
Sbjct: 457 QTIRSKRPALFSSSAKADGGKEQLTYESGEDEEDEEEEEEEEED 500


>gi|126091152 cubilin [Homo sapiens]
          Length = 3623

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 54   GFYTTKMKGRLCGDGTGACYLLPVFDTVFIRRKHWHRGLGTAMLRDFCETFPEDEALGVS 113
            G  T  + GR CG+     Y   V  T+++R      G GT     F + F  D  +G  
Sbjct: 1801 GNATGHLVGRYCGNSFPLNYSSIVGHTLWVRFISDGSGSGTGFQATFMKIFGNDNIVGTH 1860

Query: 114  CSM-SPAMYQAHPGNS 128
              + SP   + +P NS
Sbjct: 1861 GKVASPFWPENYPHNS 1876


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
           [Homo sapiens]
          Length = 593

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 106 EDEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTK 165
           E++A       SP   +  PG       H     +D   +P   +   E   GE+ E+ +
Sbjct: 90  EEDAAREGTPGSPGRGREGPGEE-----HFEDMASDEDMKPKWEEEEMEEDLGEDEEEEE 144

Query: 166 DDPECGVEEEDAGLAGQPPG 185
           +D E   EEED    G PPG
Sbjct: 145 EDYEDEEEEEDEEGLG-PPG 163


>gi|197100900 iroquois homeobox 2 [Homo sapiens]
          Length = 471

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 129 EDVSRHARTSQNDRPRQPA-PGDGSKERMCGEELEDTKDDPECGVEEEDAGLAGQPPGKL 187
           + ++ H+ ++++D  + P   GD   E   G E +D  DD E   ++++ G  G  P K 
Sbjct: 225 DSLTDHSCSAESDGEKLPCRAGDPLCES--GSECKDKYDDLEDDEDDDEEGERGLAPPKP 282

Query: 188 TRSSP 192
             SSP
Sbjct: 283 VTSSP 287


>gi|39930475 iroquois homeobox 2 [Homo sapiens]
          Length = 471

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 129 EDVSRHARTSQNDRPRQPA-PGDGSKERMCGEELEDTKDDPECGVEEEDAGLAGQPPGKL 187
           + ++ H+ ++++D  + P   GD   E   G E +D  DD E   ++++ G  G  P K 
Sbjct: 225 DSLTDHSCSAESDGEKLPCRAGDPLCES--GSECKDKYDDLEDDEDDDEEGERGLAPPKP 282

Query: 188 TRSSP 192
             SSP
Sbjct: 283 VTSSP 287


>gi|239751227 PREDICTED: hypothetical protein XP_002347761 [Homo
           sapiens]
          Length = 282

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 113 SCSMSPAMYQAHP------GNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTK 165
           S S SP    A P      G+SE + R      +D   Q  P    KE +C   L+DT+
Sbjct: 27  SGSPSPDSGSASPVEEEDVGSSEKLGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTR 85


>gi|48255913 tripartite motif-containing 16 [Homo sapiens]
          Length = 564

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 113 SCSMSPAMYQAHP------GNSEDVSRHARTSQNDRPRQPAPGDGSKERMCGEELEDTK 165
           S S SP    A P      G+SE + R      +D   Q  P    KE +C   L+DT+
Sbjct: 27  SGSPSPDSGSASPVEEEDVGSSEKLGRETEEQDSDSAEQGDPAGEGKEVLCDFCLDDTR 85


>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
          Length = 1113

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 107 DEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERM 156
           ++ +GV+ S+S     A PG  E V    R  +  R ++ AP  G K R+
Sbjct: 827 EKPVGVAASLSDIPKAAEPGKLEQV----RPQELSRVQELAPASGEKARL 872


>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
          Length = 1217

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)

Query: 107 DEALGVSCSMSPAMYQAHPGNSEDVSRHARTSQNDRPRQPAPGDGSKERM 156
           ++ +GV+ S+S     A PG  E V    R  +  R ++ AP  G K R+
Sbjct: 931 EKPVGVAASLSDIPKAAEPGKLEQV----RPQELSRVQELAPASGEKARL 976


>gi|54292117 ADAM metallopeptidase domain 28 isoform 3 preproprotein
           [Homo sapiens]
          Length = 540

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 146 PAPGDGSKERMCGEELEDTKDDPECGVEEE 175
           P P D     +CG +L +  +D +CG  EE
Sbjct: 399 PLPTDIISTPICGNQLVEMGEDCDCGTSEE 428


>gi|98985828 ADAM metallopeptidase domain 28 isoform 1 preproprotein
           [Homo sapiens]
          Length = 775

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 146 PAPGDGSKERMCGEELEDTKDDPECGVEEE 175
           P P D     +CG +L +  +D +CG  EE
Sbjct: 399 PLPTDIISTPICGNQLVEMGEDCDCGTSEE 428


>gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]
          Length = 5183

 Score = 27.3 bits (59), Expect = 8.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 111  GVSCSMSPAMYQAHPGNSEDVSRHARTS 138
            G+S +M  + +Q+ P  SE + RHA TS
Sbjct: 1735 GMSSTMKESAFQSEPRISESLVRHASTS 1762


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,943,310
Number of Sequences: 37866
Number of extensions: 463686
Number of successful extensions: 1366
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1344
Number of HSP's gapped (non-prelim): 36
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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