Guide to the Human Genome
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Name: OGFRL1 Sequence: fasta or formatted (451aa) NCBI GI: 55770902
Description:

opioid growth factor receptor-like 1

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         29           2
 C cysteine            0.4          2           1
 D aspartate           4.4         20           1
 E glutamate          11.3         51           2
 F phenylalanine       3.8         17           2
 G glycine             6.0         27           3
 H histidine           2.4         11           1
 I isoleucine          3.1         14           1
 K lysine              8.6         39           2
 L leucine             6.4         29           2
 M methionine          1.3          6           2
 N asparagine          6.7         30           2
 P proline             7.3         33           2
 Q glutamine           4.7         21           1
 R arginine            5.1         23           2
 S serine              7.8         35           3
 T threonine           5.5         25           2
 V valine              3.8         17           2
 W tryptophan          1.1          5           1
 Y tyrosine            3.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   opioid growth factor receptor-like 1 
OGFR                  0.275   opioid growth factor receptor 
SRRM2                 0.021   splicing coactivator subunit SRm300 
BPTF                  0.021   bromodomain PHD finger transcription factor isoform ...
PPIG                  0.021   peptidylprolyl isomerase G 
SETD1A                0.020   SET domain containing 1A 
FNTA                  0.020   farnesyltransferase, CAAX box, alpha isoform c [Homo...
SMARCC1               0.020   SWI/SNF-related matrix-associated actin-dependent r...
RPH3A                 0.019   rabphilin 3A homolog isoform 1 
RPH3A                 0.019   rabphilin 3A homolog isoform 2 
C2orf55               0.019   hypothetical protein LOC343990 
AFF4                  0.018   ALL1 fused gene from 5q31 
ZNF532                0.018   zinc finger protein 532 
KIF21B                0.018   kinesin family member 21B 
AFF1                  0.017   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
MYST4                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
MLLT1                 0.017   myeloid/lymphoid or mixed-lineage leukemia (trithora...
CYLC1                 0.017   cylicin, basic protein of sperm head cytoskeleton 1...
IWS1                  0.017   IWS1 homolog 
SFRS2IP               0.017   splicing factor, arginine/serine-rich 2, interactin...
MYST3                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.017   MYST histone acetyltransferase (monocytic leukemia)...
GTF2F1                0.016   general transcription factor IIF, polypeptide 1, 74...
ZC3H18                0.016   zinc finger CCCH-type containing 18 
HTATSF1               0.016   HIV-1 Tat specific factor 1 
HTATSF1               0.016   HIV-1 Tat specific factor 1 
AEBP1                 0.016   adipocyte enhancer binding protein 1 precursor [Homo...
PTPRG                 0.016   protein tyrosine phosphatase, receptor type, G prec...
DSPP                  0.016   dentin sialophosphoprotein preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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