Guide to the Human Genome
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Name: ARHGEF19 Sequence: fasta or formatted (802aa) NCBI GI: 40255149
Description:

Rho guanine nucleotide exchange factor (GEF) 19

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         64           2
 C cysteine            1.9         15           1
 D aspartate           3.4         27           1
 E glutamate           9.2         74           3
 F phenylalanine       3.0         24           1
 G glycine             6.6         53           2
 H histidine           2.6         21           2
 I isoleucine          2.2         18           1
 K lysine              4.1         33           2
 L leucine            12.2         98           3
 M methionine          1.4         11           1
 N asparagine          1.5         12           1
 P proline             7.6         61           2
 Q glutamine           5.2         42           2
 R arginine            8.5         68           3
 S serine              9.9         79           3
 T threonine           4.0         32           1
 V valine              5.7         46           2
 W tryptophan          1.6         13           1
 Y tyrosine            1.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine nucleotide exchange factor (GEF) 19 [Hom... 
ARHGEF5               0.296   rho guanine nucleotide exchange factor 5 
NGEF                  0.217   neuronal guanine nucleotide exchange factor isoform...
NGEF                  0.217   neuronal guanine nucleotide exchange factor isoform...
ARHGEF16              0.155   Rho guanine exchange factor 16 
SGEF                  0.152   Src homology 3 domain-containing guanine nucleotide...
ARHGEF15              0.146   Rho guanine exchange factor 15 
ITSN1                 0.039   intersectin 1 isoform ITSN-l 
ECT2                  0.037   epithelial cell transforming sequence 2 oncogene pro...
FGD1                  0.034   faciogenital dysplasia protein 
FGD2                  0.034   FYVE, RhoGEF and PH domain containing 2 
PLEKHG5               0.033   pleckstrin homology domain containing family G membe...
PLEKHG5               0.033   pleckstrin homology domain containing family G memb...
PLEKHG5               0.033   pleckstrin homology domain containing family G memb...
PLEKHG5               0.033   pleckstrin homology domain containing family G memb...
PLEKHG5               0.033   pleckstrin homology domain containing family G memb...
ITSN2                 0.033   intersectin 2 isoform 3 
ITSN2                 0.033   intersectin 2 isoform 1 
FGD3                  0.032   FYVE, RhoGEF and PH domain containing 3 
FGD3                  0.032   FYVE, RhoGEF and PH domain containing 3 
ARHGEF11              0.031   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.031   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
ARHGEF1               0.030   Rho guanine nucleotide exchange factor 1 isoform 1 [...
ARHGEF1               0.030   Rho guanine nucleotide exchange factor 1 isoform 3 [...
ARHGEF1               0.030   Rho guanine nucleotide exchange factor 1 isoform 2 [...
ARHGEF3               0.028   Rho guanine nucleotide exchange factor 3 isoform 2 ...
ARHGEF3               0.028   Rho guanine nucleotide exchange factor 3 isoform 1 ...
ARHGEF3               0.028   Rho guanine nucleotide exchange factor 3 isoform 3 [H...
FGD4                  0.028   FYVE, RhoGEF and PH domain containing 4 
NET1                  0.027   neuroepithelial cell transforming gene 1 isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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