Guide to the Human Genome
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Name: WASH1 Sequence: fasta or formatted (465aa) NCBI GI: 167466201
Description:

WAS protein family homolog 1

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         39           2
 C cysteine            0.2          1           1
 D aspartate           5.6         26           2
 E glutamate           7.7         36           2
 F phenylalanine       2.4         11           1
 G glycine             7.7         36           2
 H histidine           1.1          5           1
 I isoleucine          4.1         19           1
 K lysine              6.5         30           3
 L leucine             9.0         42           3
 M methionine          1.5          7           1
 N asparagine          1.3          6           1
 P proline            11.4         53          10
 Q glutamine           7.1         33           2
 R arginine            5.2         24           2
 S serine              8.6         40           4
 T threonine           3.4         16           2
 V valine              6.5         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAS protein family homolog 1 
LOC100287171          0.978   PREDICTED: hypothetical protein XP_002342940 isofor...
LOC100287171          0.971   PREDICTED: hypothetical protein XP_002342939 isofor...
ESPN                  0.041   espin 
BCL9L                 0.033   B-cell CLL/lymphoma 9-like 
BAT3                  0.032   HLA-B associated transcript-3 isoform b 
BAT3                  0.032   HLA-B associated transcript-3 isoform b 
BAT3                  0.032   HLA-B associated transcript-3 isoform b 
BAT3                  0.032   HLA-B associated transcript-3 isoform a 
FMNL1                 0.032   formin-like 1 
WASL                  0.030   Wiskott-Aldrich syndrome gene-like protein 
EVL                   0.030   Enah/Vasp-like 
VASP                  0.029   vasodilator-stimulated phosphoprotein 
WIPF3                 0.029   WAS/WASL interacting protein family, member 3 [Homo...
LMOD2                 0.028   leiomodin 2 (cardiac) 
THRAP3                0.028   thyroid hormone receptor associated protein 3 [Homo...
PELP1                 0.028   proline, glutamic acid and leucine rich protein 1 [...
PRR12                 0.028   proline rich 12 
FMN1                  0.027   formin 1 
HCN2                  0.027   hyperpolarization activated cyclic nucleotide-gated...
FMNL2                 0.027   formin-like 2 
WASF2                 0.027   WAS protein family, member 2 
PRDM2                 0.027   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.027   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.027   retinoblastoma protein-binding zinc finger protein i...
LOC100134663          0.026   PREDICTED: hypothetical protein, partial 
TAF4                  0.026   TBP-associated factor 4 
ZFHX3                 0.026   AT-binding transcription factor 1 
MLL4                  0.024   myeloid/lymphoid or mixed-lineage leukemia 4 
WASF1                 0.023   Wiskott-Aldrich syndrome protein family member 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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