| Name: LOC100287171 | Sequence: fasta or formatted (482aa) | NCBI GI: 239743664 | |
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Description: PREDICTED: hypothetical protein XP_002342939 isoform 1
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {465aa} PREDICTED: hypothetical protein XP_002342940 isoform 2 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 8.3 40 2 C cysteine 0.4 2 1 D aspartate 5.0 24 2 E glutamate 7.5 36 2 F phenylalanine 2.5 12 1 G glycine 8.1 39 2 H histidine 1.5 7 1 I isoleucine 3.9 19 1 K lysine 5.8 28 2 L leucine 8.5 41 3 M methionine 1.9 9 1 N asparagine 1.2 6 1 P proline 11.2 54 10 Q glutamine 7.7 37 3 R arginine 5.0 24 2 S serine 8.9 43 4 T threonine 3.7 18 2 V valine 6.4 31 2 W tryptophan 0.4 2 1 Y tyrosine 2.1 10 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342939 isofor... LOC100287171 0.958 PREDICTED: hypothetical protein XP_002342940 isofor... WASH1 0.931 WAS protein family homolog 1 ESPN 0.037 espin FMNL1 0.033 formin-like 1 BCL9L 0.031 B-cell CLL/lymphoma 9-like EVL 0.031 Enah/Vasp-like BAT3 0.028 HLA-B associated transcript-3 isoform b BAT3 0.028 HLA-B associated transcript-3 isoform b BAT3 0.028 HLA-B associated transcript-3 isoform b BAT3 0.028 HLA-B associated transcript-3 isoform a PELP1 0.027 proline, glutamic acid and leucine rich protein 1 [... VASP 0.026 vasodilator-stimulated phosphoprotein PRR12 0.026 proline rich 12 PRDM2 0.026 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.026 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.026 retinoblastoma protein-binding zinc finger protein i... FMN1 0.026 formin 1 WASL 0.026 Wiskott-Aldrich syndrome gene-like protein FMNL2 0.026 formin-like 2 WIPF3 0.025 WAS/WASL interacting protein family, member 3 [Homo... ZFHX3 0.025 AT-binding transcription factor 1 LMOD2 0.025 leiomodin 2 (cardiac) TAF4 0.023 TBP-associated factor 4 THRAP3 0.023 thyroid hormone receptor associated protein 3 [Homo... LOC100134663 0.023 PREDICTED: hypothetical protein, partial MLL4 0.023 myeloid/lymphoid or mixed-lineage leukemia 4 WASF1 0.022 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.022 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.022 Wiskott-Aldrich syndrome protein family member 1 [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
