C1orf88 6861

Name: C1orf88	Sequence: fasta or formatted (191aa)		NCBI GI: 166197696
Description: hypothetical protein LOC128344		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 13 2 C cysteine 2.1 4 1 D aspartate 4.2 8 1 E glutamate 2.1 4 1 F phenylalanine 6.3 12 1 G glycine 6.3 12 1 H histidine 3.1 6 1 I isoleucine 2.6 5 1 K lysine 9.9 19 2 L leucine 6.3 12 1 M methionine 1.6 3 1 N asparagine 4.7 9 1 P proline 12.0 23 3 Q glutamine 4.7 9 2 R arginine 6.3 12 1 S serine 5.2 10 1 T threonine 4.2 8 1 V valine 3.7 7 1 W tryptophan 1.0 2 1 Y tyrosine 6.8 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC128344 FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.018 PREDICTED: hypothetical protein LOC80164 MRPL49 0.015 mitochondrial ribosomal protein L49 CAT 0.013 catalase PCLO 0.013 piccolo isoform 2 PCLO 0.013 piccolo isoform 1 ODF3L2 0.013 outer dense fiber of sperm tails 3-like 2 CASC3 0.013 metastatic lymph node 51 C1orf52 0.010 hypothetical protein LOC148423 NOTCH2 0.010 notch 2 preproprotein POLR2A 0.008 DNA-directed RNA polymerase II A NOTCH1 0.008 notch1 preproprotein SEC16A 0.008 SEC16 homolog A LOC389300 0.008 PREDICTED: similar to hCG1654959 LOC389300 0.008 PREDICTED: similar to hCG1654959 LOC389300 0.008 PREDICTED: similar to hCG1654959 DNAJC14 0.008 dopamine receptor interacting protein VGF 0.008 VGF nerve growth factor inducible precursor ITGB2 0.008 integrin, beta 2 precursor ITGB2 0.008 integrin, beta 2 precursor POLD3 0.008 DNA-directed DNA polymerase delta 3 PPP1R8 0.008 protein phosphatase 1 regulatory inhibitor subunit 8... PPP1R8 0.008 protein phosphatase 1 regulatory inhibitor subunit 8... PPP1R8 0.008 protein phosphatase 1 regulatory inhibitor subunit 8 ... CGNL1 0.008 cingulin-like 1 HHIPL1 0.005 HHIP-like protein 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.