Guide to the Human Genome
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Name: PPP1R8 Sequence: fasta or formatted (127aa) NCBI GI: 4506015
Description:

protein phosphatase 1 regulatory inhibitor subunit 8 isoform gamma

Referenced in:

Serine / Threonine Protein Phosphatases
RNases and RNA Stability
Small RNAs in RNA Processing

Other entries for this name:
alt prot [351aa] protein phosphatase 1 regulatory inhibitor subunit 8 isoform alpha
alt prot [209aa] protein phosphatase 1 regulatory inhibitor subunit 8 isoform beta...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         11           1
 C cysteine            0.0          0           0
 D aspartate           1.6          2           1
 E glutamate           5.5          7           2
 F phenylalanine       1.6          2           1
 G glycine            11.0         14           2
 H histidine           2.4          3           1
 I isoleucine          2.4          3           1
 K lysine              7.9         10           4
 L leucine             7.9         10           2
 M methionine          3.1          4           1
 N asparagine          5.5          7           1
 P proline            15.0         19           2
 Q glutamine           2.4          3           1
 R arginine            2.4          3           2
 S serine              6.3          8           1
 T threonine           3.9          5           1
 V valine              8.7         11           2
 W tryptophan          0.8          1           1
 Y tyrosine            3.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1 regulatory inhibitor subunit 8 ... 
PPP1R8                1.000   protein phosphatase 1 regulatory inhibitor subunit 8...
PPP1R8                1.000   protein phosphatase 1 regulatory inhibitor subunit 8...
NADK                  0.033   NAD kinase 
LOC100288686          0.029   PREDICTED: hypothetical protein XP_002342615 
TLX2                  0.029   T-cell leukemia homeobox 2 
CASKIN1               0.025   CASK interacting protein 1 
LOC728317             0.025   PREDICTED: hypothetical protein 
LOC728317             0.025   PREDICTED: hypothetical protein 
LOC728317             0.025   PREDICTED: hypothetical protein 
LOC728307             0.025   PREDICTED: hypothetical protein 
PHF21A                0.025   BRAF35/HDAC2 complex isoform b 
PHF21A                0.025   BRAF35/HDAC2 complex isoform a 
LENG8                 0.025   leukocyte receptor cluster member 8 
MLXIPL                0.021   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.021   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.021   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.021   Williams Beuren syndrome chromosome region 14 isofor...
RAPH1                 0.021   Ras association and pleckstrin homology domains 1 is...
SF3B2                 0.021   splicing factor 3B subunit 2 
PRR13                 0.021   proline rich 13 isoform 2 
SCARF2                0.021   scavenger receptor class F, member 2 isoform 1 [Homo...
SCARF2                0.021   scavenger receptor class F, member 2 isoform 2 [Homo...
PEF1                  0.021   penta-EF-hand domain containing 1 
TNRC18                0.017   trinucleotide repeat containing 18 
SRCAP                 0.017   Snf2-related CBP activator protein 
TTN                   0.017   titin isoform N2-A 
TTN                   0.017   titin isoform novex-2 
TTN                   0.017   titin isoform novex-1 
TTN                   0.017   titin isoform N2-B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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