Guide to the Human Genome
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Name: MRPL49 Sequence: fasta or formatted (166aa) NCBI GI: 4826649
Description:

mitochondrial ribosomal protein L49

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6          6           2
 C cysteine            0.6          1           1
 D aspartate           5.4          9           1
 E glutamate           5.4          9           1
 F phenylalanine       4.2          7           1
 G glycine             7.2         12           1
 H histidine           2.4          4           1
 I isoleucine          3.6          6           1
 K lysine              4.8          8           1
 L leucine             9.0         15           2
 M methionine          2.4          4           1
 N asparagine          2.4          4           1
 P proline            10.8         18           3
 Q glutamine           5.4          9           1
 R arginine            9.0         15           2
 S serine              3.0          5           1
 T threonine           7.2         12           1
 V valine              7.2         12           1
 W tryptophan          2.4          4           1
 Y tyrosine            3.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L49 
LILRB5                0.024   leukocyte immunoglobulin-like receptor, subfamily B...
KDM6B                 0.024   lysine (K)-specific demethylase 6B 
HLF                   0.021   hepatic leukemia factor 
SFPQ                  0.021   splicing factor proline/glutamine rich (polypyrimidin...
C1orf88               0.018   hypothetical protein LOC128344 
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.018   Williams Beuren syndrome chromosome region 14 isofor...
EFS                   0.018   embryonal Fyn-associated substrate isoform 2 
EFS                   0.018   embryonal Fyn-associated substrate isoform 1 
LMOD2                 0.018   leiomodin 2 (cardiac) 
RUSC1                 0.015   RUN and SH3 domain containing 1 isoform b 
RUSC1                 0.015   RUN and SH3 domain containing 1 isoform a 
LOC100128370          0.015   PREDICTED: hypothetical protein 
LOC100128370          0.015   PREDICTED: hypothetical protein 
MYO3B                 0.015   myosin IIIB isoform 1 
MYO3B                 0.015   myosin IIIB isoform 2 
GCC2                  0.015   GRIP and coiled-coil domain-containing 2 
PSORS1C2              0.015   SPR1 protein 
WWP1                  0.012   WW domain containing E3 ubiquitin protein ligase 1 [...
POU3F1                0.012   POU domain, class 3, transcription factor 1 
TTN                   0.012   titin isoform N2-A 
DIAPH1                0.012   diaphanous 1 isoform 2 
DIAPH1                0.012   diaphanous 1 isoform 1 
WASF2                 0.012   WAS protein family, member 2 
PRB3                  0.012   proline-rich protein BstNI subfamily 3 precursor [H...
WBP11                 0.012   WW domain binding protein 11 
SRRM1                 0.012   serine/arginine repetitive matrix 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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