Guide to the Human Genome
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Name: PPP1R8 Sequence: fasta or formatted (351aa) NCBI GI: 13699256
Description:

protein phosphatase 1 regulatory inhibitor subunit 8 isoform alpha

Referenced in:

Serine / Threonine Protein Phosphatases
RNases and RNA Stability
Small RNAs in RNA Processing

Other entries for this name:
alt prot [209aa] protein phosphatase 1 regulatory inhibitor subunit 8 isoform beta...
alt prot [127aa] protein phosphatase 1 regulatory inhibitor subunit 8 isoform gamma
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         22           4
 C cysteine            0.9          3           1
 D aspartate           5.7         20           2
 E glutamate           6.8         24           3
 F phenylalanine       3.1         11           1
 G glycine             8.3         29           2
 H histidine           3.4         12           1
 I isoleucine          4.6         16           2
 K lysine              7.7         27           4
 L leucine             9.7         34           2
 M methionine          1.7          6           1
 N asparagine          4.8         17           1
 P proline             9.7         34           3
 Q glutamine           2.3          8           2
 R arginine            4.6         16           2
 S serine              6.3         22           2
 T threonine           5.4         19           1
 V valine              6.0         21           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1 regulatory inhibitor subunit 8... 
PPP1R8                0.580   protein phosphatase 1 regulatory inhibitor subunit 8...
PPP1R8                0.345   protein phosphatase 1 regulatory inhibitor subunit 8 ...
SNIP1                 0.060   Smad nuclear interacting protein 
SLC4A1AP              0.057   solute carrier family 4 (anion exchanger), member 1...
KIAA0284              0.029   hypothetical protein LOC283638 isoform 1 
CEP170                0.022   centrosomal protein 170kDa isoform beta 
CEP170                0.022   centrosomal protein 170kDa isoform alpha 
CEP170                0.022   centrosomal protein 170kDa isoform gamma 
AGGF1                 0.014   angiogenic factor VG5Q 
CALCOCO2              0.014   calcium binding and coiled-coil domain 2 
NADK                  0.011   NAD kinase 
EIF2S2                0.011   eukaryotic translation initiation factor 2 beta [Hom...
LOC100288229          0.010   PREDICTED: hypothetical protein XP_002343606 
ATCAY                 0.010   caytaxin 
LOC100288686          0.010   PREDICTED: hypothetical protein XP_002342615 
TLX2                  0.010   T-cell leukemia homeobox 2 
CXorf49               0.010   hypothetical protein LOC100130361 
CXorf49B              0.010   hypothetical protein LOC100132994 
CDCA2                 0.010   cell division cycle associated 2 
CASKIN1               0.009   CASK interacting protein 1 
UBR1                  0.009   ubiquitin protein ligase E3 component n-recognin 1 [...
LRRC37A3              0.009   leucine rich repeat containing 37, member A3 
LOC728317             0.009   PREDICTED: hypothetical protein 
LOC728317             0.009   PREDICTED: hypothetical protein 
LOC728317             0.009   PREDICTED: hypothetical protein 
LOC728307             0.009   PREDICTED: hypothetical protein 
LOC100294335          0.009   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.009   PREDICTED: similar to c114 SLIT-like testicular pro...
PHF21A                0.009   BRAF35/HDAC2 complex isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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