Guide to the Human Genome
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Name: PPP1R8 Sequence: fasta or formatted (209aa) NCBI GI: 20336239
Description:

protein phosphatase 1 regulatory inhibitor subunit 8 isoform beta/delta

Referenced in:

Serine / Threonine Protein Phosphatases
RNases and RNA Stability
Small RNAs in RNA Processing

Other entries for this name:
alt prot [351aa] protein phosphatase 1 regulatory inhibitor subunit 8 isoform alpha
alt prot [127aa] protein phosphatase 1 regulatory inhibitor subunit 8 isoform gamma
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         12           1
 C cysteine            0.0          0           0
 D aspartate           4.8         10           2
 E glutamate           9.1         19           3
 F phenylalanine       2.4          5           1
 G glycine             9.6         20           2
 H histidine           1.9          4           1
 I isoleucine          3.8          8           2
 K lysine              7.2         15           4
 L leucine             8.6         18           2
 M methionine          2.4          5           1
 N asparagine          6.7         14           1
 P proline            11.0         23           2
 Q glutamine           1.9          4           1
 R arginine            4.8         10           2
 S serine              5.7         12           1
 T threonine           5.3         11           1
 V valine              6.7         14           2
 W tryptophan          0.5          1           1
 Y tyrosine            1.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1 regulatory inhibitor subunit 8... 
PPP1R8                1.000   protein phosphatase 1 regulatory inhibitor subunit 8...
PPP1R8                0.594   protein phosphatase 1 regulatory inhibitor subunit 8 ...
NADK                  0.020   NAD kinase 
LOC100288229          0.017   PREDICTED: hypothetical protein XP_002343606 
ATCAY                 0.017   caytaxin 
LOC100288686          0.017   PREDICTED: hypothetical protein XP_002342615 
TLX2                  0.017   T-cell leukemia homeobox 2 
CXorf49               0.017   hypothetical protein LOC100130361 
CXorf49B              0.017   hypothetical protein LOC100132994 
CDCA2                 0.017   cell division cycle associated 2 
CASKIN1               0.015   CASK interacting protein 1 
LRRC37A3              0.015   leucine rich repeat containing 37, member A3 
LOC728317             0.015   PREDICTED: hypothetical protein 
LOC728317             0.015   PREDICTED: hypothetical protein 
LOC728317             0.015   PREDICTED: hypothetical protein 
LOC728307             0.015   PREDICTED: hypothetical protein 
LOC100294335          0.015   PREDICTED: similar to c114 SLIT-like testicular pro...
LOC100294335          0.015   PREDICTED: similar to c114 SLIT-like testicular pro...
PHF21A                0.015   BRAF35/HDAC2 complex isoform b 
PHF21A                0.015   BRAF35/HDAC2 complex isoform a 
LENG8                 0.015   leukocyte receptor cluster member 8 
LRRC37A2              0.015   c114 SLIT-like testicular protein 
LRRC37A               0.015   leucine rich repeat containing 37A 
MLXIPL                0.012   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.012   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.012   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.012   Williams Beuren syndrome chromosome region 14 isofor...
RAPH1                 0.012   Ras association and pleckstrin homology domains 1 is...
SF3B2                 0.012   splicing factor 3B subunit 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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