Guide to the Human Genome
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Name: CAT Sequence: fasta or formatted (527aa) NCBI GI: 4557014
Description:

catalase

Referenced in:

Peroxisomes
Superoxide Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         42           2
 C cysteine            0.8          4           1
 D aspartate           6.8         36           2
 E glutamate           4.7         25           2
 F phenylalanine       6.1         32           2
 G glycine             6.5         34           2
 H histidine           4.2         22           1
 I isoleucine          4.6         24           1
 K lysine              5.7         30           2
 L leucine             5.7         30           2
 M methionine          1.9         10           1
 N asparagine          6.3         33           2
 P proline             7.0         37           2
 Q glutamine           4.9         26           2
 R arginine            5.5         29           2
 S serine              4.7         25           1
 T threonine           4.6         24           2
 V valine              7.0         37           2
 W tryptophan          1.1          6           1
 Y tyrosine            4.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   catalase 
ENOPH1                0.007   enolase-phosphatase 1 
SERPINC1              0.007   serpin peptidase inhibitor, clade C, member 1 
VPS37A                0.007   hepatocellular carcinoma related protein 1 isoform ...
VPS37A                0.007   hepatocellular carcinoma related protein 1 isoform ...
C1orf88               0.005   hypothetical protein LOC128344 
FTSJD1                0.005   FtsJ methyltransferase domain containing 1 
FTSJD1                0.005   FtsJ methyltransferase domain containing 1 
DDX18                 0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 
ZNF768                0.005   zinc finger protein 768 
ZNF329                0.005   zinc finger protein 329 
CSRP2BP               0.004   CSRP2 binding protein isoform b 
CSRP2BP               0.004   CSRP2 binding protein isoform a 
FMNL1                 0.004   formin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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