Search of human proteins with 166158925

Search of human proteins with 166158925

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|166158925 endothelial cell growth factor 1
(platelet-derived) precursor [Homo sapiens]
         (482 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|166158925 endothelial cell growth factor 1 (platelet-derived)...   941   0.0  
gi|4503445 endothelial cell growth factor 1 (platelet-derived) p...   941   0.0  
gi|166158922 endothelial cell growth factor 1 (platelet-derived)...   941   0.0  
gi|55770876 notch4 preproprotein [Homo sapiens]                        36   0.068
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]    35   0.12 
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]     35   0.12 
gi|170763515 DMRT-like family A1 [Homo sapiens]                        33   0.58 
gi|46852392 chromobox homolog 6 [Homo sapiens]                         33   0.75 
gi|93102375 hypothetical protein LOC10827 [Homo sapiens]               32   0.98 
gi|7662176 ProSAPiP1 protein [Homo sapiens]                            32   1.3  
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         32   1.3  
gi|122937331 60 kDa lysophospholipase [Homo sapiens]                   32   1.3  
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H...    31   2.2  
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig...    31   2.2  
gi|7662354 MON1 homolog B [Homo sapiens]                               31   2.2  
gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]            31   2.9  
gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]            31   2.9  
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]              31   2.9  
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]          30   3.7  
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    30   3.7  
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    30   3.7  
gi|56676371 cleavage and polyadenylation specific factor 1, 160k...    30   3.7  
gi|110347463 human immunodeficiency virus type I enhancer bindin...    30   4.9  
gi|109659841 dendritic cell-derived ubiquitin-like protein [Homo...    30   4.9  
gi|62739181 rhotekin isoform c [Homo sapiens]                          30   6.4  
gi|62739179 rhotekin isoform a [Homo sapiens]                          30   6.4  
gi|19526471 rhotekin isoform b [Homo sapiens]                          30   6.4  
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]                30   6.4  
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ...    30   6.4  
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ...    30   6.4  

>gi|166158925 endothelial cell growth factor 1 (platelet-derived)
           precursor [Homo sapiens]
          Length = 482

 Score =  941 bits (2431), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA 60
           MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA
Sbjct: 1   MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA 60

Query: 61  VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG 120
           VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG
Sbjct: 61  VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG 120

Query: 121 VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA 180
           VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA
Sbjct: 121 VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA 180

Query: 181 GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA 240
           GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA
Sbjct: 181 GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA 240

Query: 241 VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP 300
           VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP
Sbjct: 241 VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP 300

Query: 301 DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL 360
           DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL
Sbjct: 301 DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL 360

Query: 361 CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG 420
           CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG
Sbjct: 361 CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG 420

Query: 421 AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP 480
           AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP
Sbjct: 421 AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP 480

Query: 481 QQ 482
           QQ
Sbjct: 481 QQ 482


>gi|4503445 endothelial cell growth factor 1 (platelet-derived)
           precursor [Homo sapiens]
          Length = 482

 Score =  941 bits (2431), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA 60
           MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA
Sbjct: 1   MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA 60

Query: 61  VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG 120
           VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG
Sbjct: 61  VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG 120

Query: 121 VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA 180
           VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA
Sbjct: 121 VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA 180

Query: 181 GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA 240
           GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA
Sbjct: 181 GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA 240

Query: 241 VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP 300
           VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP
Sbjct: 241 VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP 300

Query: 301 DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL 360
           DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL
Sbjct: 301 DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL 360

Query: 361 CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG 420
           CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG
Sbjct: 361 CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG 420

Query: 421 AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP 480
           AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP
Sbjct: 421 AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP 480

Query: 481 QQ 482
           QQ
Sbjct: 481 QQ 482


>gi|166158922 endothelial cell growth factor 1 (platelet-derived)
           precursor [Homo sapiens]
          Length = 482

 Score =  941 bits (2431), Expect = 0.0
 Identities = 482/482 (100%), Positives = 482/482 (100%)

Query: 1   MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA 60
           MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA
Sbjct: 1   MAALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAA 60

Query: 61  VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG 120
           VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG
Sbjct: 61  VVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQQLVDKHSTGG 120

Query: 121 VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA 180
           VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA
Sbjct: 121 VGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPEQMQVLLDQA 180

Query: 181 GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA 240
           GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA
Sbjct: 181 GCCIVGQSEQLVPADGILYAARDVTATVDSLPLITASILSKKLVEGLSALVVDVKFGGAA 240

Query: 241 VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP 300
           VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP
Sbjct: 241 VFPNQEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPP 300

Query: 301 DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL 360
           DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL
Sbjct: 301 DLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARAL 360

Query: 361 CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG 420
           CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG
Sbjct: 361 CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVG 420

Query: 421 AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP 480
           AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP
Sbjct: 421 AELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAPSPFAELVLPP 480

Query: 481 QQ 482
           QQ
Sbjct: 481 QQ 482


>gi|55770876 notch4 preproprotein [Homo sapiens]
          Length = 2003

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 245  QEQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAGPPDLRD 304
            +E A E+A+ L+G+GA+  LR  A L   D      V H     + L  ++GAGPP+ R 
Sbjct: 1776 REGAVEVAQLLLGLGAARELRDQAGLAPAD------VAHQRNHWDLLTLLEGAGPPEARH 1829

Query: 305  LVT 307
              T
Sbjct: 1830 KAT 1832


>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
          Length = 600

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 411 AGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAP 470
           + EPL    G E     G++ R   PW    R    L GP          +S R P ++P
Sbjct: 39  SSEPLEAKQGPE----TGRQSRSSRPWSPQSRAKTPLGGPAGPETSSPAPVSPREPSSSP 94

Query: 471 SPFA----ELVLPPQ 481
           SP A    +L  PPQ
Sbjct: 95  SPLAPARQDLAAPPQ 109


>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
          Length = 716

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 411 AGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDGPALSGPQSRALQEALVLSDRAPFAAP 470
           + EPL    G E     G++ R   PW    R    L GP          +S R P ++P
Sbjct: 39  SSEPLEAKQGPE----TGRQSRSSRPWSPQSRAKTPLGGPAGPETSSPAPVSPREPSSSP 94

Query: 471 SPFA----ELVLPPQ 481
           SP A    +L  PPQ
Sbjct: 95  SPLAPARQDLAAPPQ 109


>gi|170763515 DMRT-like family A1 [Homo sapiens]
          Length = 504

 Score = 33.1 bits (74), Expect = 0.58
 Identities = 43/152 (28%), Positives = 58/152 (38%), Gaps = 19/152 (12%)

Query: 2   AALMTPGTGA-PPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDG------GRLSEADI 54
           AA  T G+G  PPAPG  SG G+ G   P     + P+  R +  G      G       
Sbjct: 64  AAAATSGSGGCPPAPGLESGVGAVGCGYP-----RTPKCARCRNHGVVSALKGHKRFCRW 118

Query: 55  RGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWRQ---- 110
           R    A     A+  ++ A  +A+R +    E  +   Q L  SG  L WP   R     
Sbjct: 119 RDCACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCSG--LSWPPGGRASGGG 176

Query: 111 -QLVDKHSTGGVGDKVSLVLAPALAACGCKVP 141
            +  +  STGG     +L L     A G   P
Sbjct: 177 GRAENPQSTGGPAAGAALGLGALRQASGSATP 208


>gi|46852392 chromobox homolog 6 [Homo sapiens]
          Length = 412

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 12/51 (23%)

Query: 2   AALMTPGTG----APPAPGDFSGEGSQGLPDPSPE--------PKQLPELI 40
           A    PG G    AP AP D    GS G P P+P+        PK LPE +
Sbjct: 250 AEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETV 300


>gi|93102375 hypothetical protein LOC10827 [Homo sapiens]
          Length = 505

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 17/179 (9%)

Query: 241 VFPNQEQ-ARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDG--- 296
           V P Q+  ++++ +T  G   S G  + ++ +A    +G+ + + +E  E  L + G   
Sbjct: 66  VLPIQDNVSKDVPQTRWGYWGSWGKSILSSASATVATVGQGISNVIEKAETSLGIPGPSE 125

Query: 297 --------AGPPDLRDLVTT--LGGAL-LWLSGHAGTQAQGAARVAAALDDGSALGRFER 345
                   AG  + ++   +  + GA  ++ +     Q+ G + ++  LD    +G+   
Sbjct: 126 ISTEVKYVAGETNAKENENSSPVAGAFGVFSTISTAVQSTGKSVISGGLDALEFIGKKTM 185

Query: 346 MLAAQGVDPGLARAL-CSGSPAERRQLLPRAREQEELLAPADGTVELVRALPLALVLHE 403
            + A+G DPG  R        A   Q+L  A+E+EE+    + TVE  +     L+  E
Sbjct: 186 DVIAEG-DPGFKRTKGLMNRNATLSQVLREAKEKEEIRTSNEVTVETDKKTHYGLLFDE 243


>gi|7662176 ProSAPiP1 protein [Homo sapiens]
          Length = 673

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 7/161 (4%)

Query: 310 GGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGVDPGLARALCS--GSPAE 367
           GG+    SG+       + R ++     S++GR   + + +G   GL  A CS     A 
Sbjct: 261 GGSSGGGSGYQDLGTSDSGRASSKSGSSSSMGRPGHLGSGEGGGGGLPFAACSPPSPSAL 320

Query: 368 RRQLLPRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLGVGAEL--LV 425
            ++L  R  E+E+ +A    ++E   A  +A VL E      R    LR G   +L  + 
Sbjct: 321 IQELEERLWEKEQEVAALRRSLEQSEA-AVAQVLEERQKAWERELAELRQGCSGKLQQVA 379

Query: 426 DVGQRLRRGTPW--LRVHRDGPALSGPQSRALQEALVLSDR 464
              QR ++G     LR+ +D   L    +R +++   L D+
Sbjct: 380 RRAQRAQQGLQLQVLRLQQDKKQLQEEAARLMRQREELEDK 420


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 7    PGTGAPPAPGDFSGEGSQGLPDPSPEPKQLP 37
            PG+  PP P   +G   + +PDP P   Q P
Sbjct: 1235 PGSSGPPGPAGATGRAPKDIPDPGPPGDQGP 1265


>gi|122937331 60 kDa lysophospholipase [Homo sapiens]
          Length = 579

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 246 EQARELAKTLVGVGASLGLRVAAALTAMDKPLGRCVGHALEVEEALLCMDGAG---PPDL 302
           + A  +A    GV +   +   AAL  +   LG+  G +L+V + LL  D  G   PP +
Sbjct: 307 DYAAGMAMAGAGVISGFDMTSEAALAKLSYVLGQ-PGLSLDVRKELLTKDLRGEMTPPSV 365

Query: 303 RDLV-----TTLGGALLWLSGHAGTQAQGAARVA 331
            +        TLGG + WL   +G+Q   A R A
Sbjct: 366 EERRPSLQGNTLGGGVSWLLSLSGSQEADALRNA 399


>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
           sapiens]
          Length = 340

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 317 SGHAGTQAQ----GAARVAAALDDGSALGRFERMLAAQGVDPGLARALCSGSPAERRQLL 372
           +G AG + +    GAA  A A+ +  A+G+ E     +G     A     G   +  ++ 
Sbjct: 109 AGAAGEEEEAGDGGAAGAAGAIGETGAVGKGEAEATGEGGSASEAEGAGEGGAGDELRVA 168

Query: 373 PRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLG 418
             ARE +E  A   G      A+  A  + E GA    AGE   +G
Sbjct: 169 EEARESDEGAAGDTGPAGEAEAVGEAGAVGEAGA----AGEAGAVG 210


>gi|169216749 PREDICTED: similar to Putative paraneoplastic
           antigen-like protein 6B-like protein [Homo sapiens]
          Length = 340

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 8/106 (7%)

Query: 317 SGHAGTQAQ----GAARVAAALDDGSALGRFERMLAAQGVDPGLARALCSGSPAERRQLL 372
           +G AG + +    GAA  A A+ +  A+G+ E     +G     A     G   +  ++ 
Sbjct: 109 AGAAGEEEEAGDGGAAGAAGAIGETGAVGKGEAEATGEGGSASEAEGAGEGGAGDELRVA 168

Query: 373 PRAREQEELLAPADGTVELVRALPLALVLHELGAGRSRAGEPLRLG 418
             ARE +E  A   G      A+  A  + E GA    AGE   +G
Sbjct: 169 EEARESDEGAAGDTGPAGEAEAVGEAGAVGEAGA----AGEAGAVG 210


>gi|7662354 MON1 homolog B [Homo sapiens]
          Length = 547

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 23/115 (20%)

Query: 170 PEQMQVLLDQAGCCIVGQSEQLVPA-------DGILYAARDVTATVDSLPLIT------- 215
           P  +Q+LLD  G       E   P        DG  YA     A +D++P+         
Sbjct: 301 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYA---YVARLDAMPVCLLLLGTQR 357

Query: 216 ----ASILSKKLVE-GLSALVVDVKFGGAAVFPNQEQARELAKTLVGVGASLGLR 265
               A    ++LVE G+ AL      G AA F N   A   A ++  VGA  GLR
Sbjct: 358 EAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAP-GLR 411


>gi|169216359 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 12  PPAPGDFSGEGSQGLP----DPSPEPKQLPELIRMKRDGGRLSEADIRGFVAAVVNGSA 66
           PP PG F    S G P      SP P   P L R    G R   A  RG+V+  + GSA
Sbjct: 85  PPPPGPFRAP-SPGSPRCQRPASPAPHPHPTLERPAPRGVRCFPAGTRGWVSIALGGSA 142


>gi|169216600 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 225

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 12  PPAPGDFSGEGSQGLP----DPSPEPKQLPELIRMKRDGGRLSEADIRGFVAAVVNGSA 66
           PP PG F    S G P      SP P   P L R    G R   A  RG+V+  + GSA
Sbjct: 85  PPPPGPFRAP-SPGSPRCQRPASPAPHPHPTLERPAPRGVRCFPAGTRGWVSIALGGSA 142


>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
          Length = 739

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 32/110 (29%), Positives = 42/110 (38%), Gaps = 13/110 (11%)

Query: 3   ALMTPGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFVAAVV 62
           A    G GA  A     G GS G+P   PE    P        G R S   +     A++
Sbjct: 46  AAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPP------TGLRFSPEQVACVCEALL 99

Query: 63  NGSAQGAQ---IGAMLMAIRLRGMDLEETSVLTQALAQSGQQLEWPEAWR 109
                G     +GA+  A RLRG D     VL      + Q+ E+ E +R
Sbjct: 100 QAGHAGRLSRFLGALPPAERLRGSD----PVLRARALVAFQRGEYAELYR 145


>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
          Length = 2944

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 8/49 (16%)

Query: 10   GAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADIRGFV 58
            GAP  PG     G QG P P+          R ++    L+E DIRGFV
Sbjct: 2754 GAPGVPGAPGERGEQGRPGPAGP--------RGEKGEAALTEDDIRGFV 2794


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 7   PGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGG 47
           PG G P +P D   + SQG   P P P   PE +     GG
Sbjct: 104 PGMGPPQSPMD---QHSQGYMSPHPSPLGAPEHVSSPMSGG 141


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 7   PGTGAPPAPGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGG 47
           PG G P +P D   + SQG   P P P   PE +     GG
Sbjct: 104 PGMGPPQSPMD---QHSQGYMSPHPSPLGAPEHVSSPMSGG 141


>gi|56676371 cleavage and polyadenylation specific factor 1, 160kDa
           [Homo sapiens]
          Length = 1443

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 53/174 (30%), Positives = 67/174 (38%), Gaps = 39/174 (22%)

Query: 301 DLRDLVTT---LGGALLWLSGHAGTQAQG-AARVAAALDDGSALGRFERMLAAQG---VD 353
           DL  + TT   LGGA   L G +G +A+G  +  +  +DD       E ML         
Sbjct: 703 DLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDE------EEMLYGDSGSLFS 756

Query: 354 PGLARALCSGSPAERRQLLPRAREQEE--LLAPADGTVE-----------LVRALPL--- 397
           P    A  S  P   R   P   E     LL   +GT+E           LV+  P+   
Sbjct: 757 PSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQR 816

Query: 398 ALVLHELG----AGRSRAGEPLRLG----VGAELLVDVGQRLRRGTPWLRVHRD 443
            LV    G     G +R  E  R G    V   LLV +G R  R  P+L VH D
Sbjct: 817 VLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSR--PYLLVHVD 868


>gi|110347463 human immunodeficiency virus type I enhancer binding
            protein 2 [Homo sapiens]
          Length = 2446

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 29   PSPEPKQLPELIRMKRDGGRLSEADIRGFVAAVVNGSAQ 67
            P P P ++PE+     D G LS A + G  A+ V+ S +
Sbjct: 1036 PCPHPAEVPEVRSKSFDYGNLSHAPVSGAAASTVSPSRE 1074


>gi|109659841 dendritic cell-derived ubiquitin-like protein [Homo
           sapiens]
          Length = 234

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 345 RMLAAQGVDPGLARALCSGSPAERRQLLPRAREQEELLAPADGTVELVRALPL 397
           R+ AA+GV+PG  R   SG P      L    + EEL  P D  V+++ + P+
Sbjct: 180 RLHAAEGVEPGSQRWFFSGRP------LTDKMKFEELKIPKDYVVQVIVSQPV 226


>gi|62739181 rhotekin isoform c [Homo sapiens]
          Length = 513

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 428 GQRLRRGTPWLRVHRDGPALSGPQSRA-LQEALVLSDRAPFAAPSPFAELVLPP 480
           G RL    PWL +  D PAL  P S A +  A   +   P+  P  F+   +PP
Sbjct: 423 GARLETPPPWLAMFTDQPALPNPCSPASVAPAPDWTHPLPWGRPRTFSLDAVPP 476


>gi|62739179 rhotekin isoform a [Homo sapiens]
          Length = 563

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 428 GQRLRRGTPWLRVHRDGPALSGPQSRA-LQEALVLSDRAPFAAPSPFAELVLPP 480
           G RL    PWL +  D PAL  P S A +  A   +   P+  P  F+   +PP
Sbjct: 473 GARLETPPPWLAMFTDQPALPNPCSPASVAPAPDWTHPLPWGRPRTFSLDAVPP 526


>gi|19526471 rhotekin isoform b [Homo sapiens]
          Length = 550

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 428 GQRLRRGTPWLRVHRDGPALSGPQSRA-LQEALVLSDRAPFAAPSPFAELVLPP 480
           G RL    PWL +  D PAL  P S A +  A   +   P+  P  F+   +PP
Sbjct: 460 GARLETPPPWLAMFTDQPALPNPCSPASVAPAPDWTHPLPWGRPRTFSLDAVPP 513


>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
          Length = 703

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 2   AALMTPGT-GAPPAPGDFSGEGSQGLPDPSPEP 33
           A L  PG  G P APGD    G  G+P P  EP
Sbjct: 234 AGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEP 266


>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
            sapiens]
          Length = 1650

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 9    TGAPPAPGDFSGEGSQGLPDP-----SPEPKQLPELIRMKRDGGRLSEADIRGFVAAVVN 63
            TG     G+   +G  G P P      P P Q+P+  R   DG RL + D      A+  
Sbjct: 1390 TGPGGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQED-----EAIPT 1444

Query: 64   GSAQGAQIG 72
            G A G+  G
Sbjct: 1445 GGAPGSPGG 1453


>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
            sapiens]
          Length = 1629

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 9    TGAPPAPGDFSGEGSQGLPDP-----SPEPKQLPELIRMKRDGGRLSEADIRGFVAAVVN 63
            TG     G+   +G  G P P      P P Q+P+  R   DG RL + D      A+  
Sbjct: 1369 TGPGGPKGEKGVQGPPGHPGPPGEVIQPLPIQMPKKTRRSVDGSRLMQED-----EAIPT 1423

Query: 64   GSAQGAQIG 72
            G A G+  G
Sbjct: 1424 GGAPGSPGG 1432


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,707,997
Number of Sequences: 37866
Number of extensions: 984890
Number of successful extensions: 4459
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4381
Number of HSP's gapped (non-prelim): 113
length of query: 482
length of database: 18,247,518
effective HSP length: 106
effective length of query: 376
effective length of database: 14,233,722
effective search space: 5351879472
effective search space used: 5351879472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.