Guide to the Human Genome
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Name: ProSAPiP1 Sequence: fasta or formatted (673aa) NCBI GI: 7662176
Description:

ProSAPiP1 protein

Referenced in:

Additional Cell Cycle Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         65           4
 C cysteine            1.3          9           1
 D aspartate           3.3         22           1
 E glutamate           9.7         65           2
 F phenylalanine       1.3          9           1
 G glycine            11.6         78           5
 H histidine           1.2          8           1
 I isoleucine          1.3          9           1
 K lysine              4.8         32           2
 L leucine            10.1         68           2
 M methionine          1.3          9           1
 N asparagine          1.3          9           1
 P proline             6.2         42           2
 Q glutamine           7.1         48           2
 R arginine            8.3         56           2
 S serine             11.9         80           4
 T threonine           3.3         22           1
 V valine              4.0         27           2
 W tryptophan          0.7          5           1
 Y tyrosine            1.5         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ProSAPiP1 protein 
LZTS2                 0.229   leucine zipper, putative tumor suppressor 2 
LZTS1                 0.213   leucine zipper, putative tumor suppressor 1 
N4BP3                 0.128   Nedd4 binding protein 3 
CROCC                 0.038   ciliary rootlet coiled-coil 
PLEC1                 0.038   plectin 1 isoform 11 
PLEC1                 0.038   plectin 1 isoform 10 
PLEC1                 0.038   plectin 1 isoform 8 
PLEC1                 0.038   plectin 1 isoform 7 
PLEC1                 0.038   plectin 1 isoform 6 
PLEC1                 0.038   plectin 1 isoform 3 
PLEC1                 0.038   plectin 1 isoform 2 
PLEC1                 0.038   plectin 1 isoform 1 
CEP250                0.035   centrosomal protein 2 
CDC42BPG              0.032   CDC42 binding protein kinase gamma (DMPK-like) [Hom...
LOC400352             0.031   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.031   PREDICTED: similar to Putative golgin subfamily A m...
LOC645202             0.031   PREDICTED: hypothetical protein LOC645202 
HRNR                  0.031   hornerin 
FYCO1                 0.030   FYVE and coiled-coil domain containing 1 
GOLGB1                0.030   golgi autoantigen, golgin subfamily b, macrogolgin ...
RDX                   0.029   radixin 
LOC100133220          0.028   PREDICTED: hypothetical protein 
CGN                   0.028   cingulin 
LOC283767             0.028   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.028   PREDICTED: Putative golgin subfamily A member 6-lik...
DST                   0.028   dystonin isoform 1e precursor 
NUMA1                 0.028   nuclear mitotic apparatus protein 1 
MSN                   0.027   moesin 
CALD1                 0.027   caldesmon 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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