Guide to the Human Genome
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Name: ASPG Sequence: fasta or formatted (579aa) NCBI GI: 122937331
Description:

60 kDa lysophospholipase

Referenced in:

Amino Acid Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         68           3
 C cysteine            1.7         10           1
 D aspartate           4.3         25           1
 E glutamate           6.0         35           2
 F phenylalanine       2.9         17           2
 G glycine            10.4         60           3
 H histidine           2.4         14           1
 I isoleucine          2.6         15           1
 K lysine              1.7         10           1
 L leucine            14.2         82           3
 M methionine          2.6         15           1
 N asparagine          2.4         14           1
 P proline             5.0         29           2
 Q glutamine           4.5         26           1
 R arginine            5.9         34           2
 S serine              5.2         30           2
 T threonine           5.5         32           2
 V valine              8.3         48           2
 W tryptophan          0.9          5           2
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   60 kDa lysophospholipase 
ANKRD50               0.044   ankyrin repeat domain 50 
ANK2                  0.042   ankyrin 2 isoform 3 
ANK2                  0.042   ankyrin 2 isoform 2 
ANK2                  0.042   ankyrin 2 isoform 1 
ANKRD29               0.042   ankyrin repeat domain 29 
ANKRD17               0.042   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.042   ankyrin repeat domain protein 17 isoform b 
TANC1                 0.040   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.040   tetratricopeptide repeat, ankyrin repeat and coiled...
ANK3                  0.040   ankyrin 3 isoform 1 
TANC2                 0.039   tetratricopeptide repeat, ankyrin repeat and coiled...
ANK1                  0.039   ankyrin 1 isoform 9 
ANK1                  0.039   ankyrin 1 isoform 1 
ANK1                  0.039   ankyrin 1 isoform 3 
ANK1                  0.039   ankyrin 1 isoform 2 
ANK1                  0.039   ankyrin 1 isoform 4 
ANKRD52               0.038   ankyrin repeat domain 52 
RIPK4                 0.037   ankyrin repeat domain 3 
ANKRD24               0.037   ankyrin repeat domain 24 
RFXANK                0.036   regulatory factor X-associated ankyrin-containing pr...
RFXANK                0.036   regulatory factor X-associated ankyrin-containing pro...
ANKRD23               0.036   diabetes related ankyrin repeat protein 
ANKHD1                0.036   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.036   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.036   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.036   ANKHD1-EIF4EBP3 protein 
ANKRD44               0.036   ankyrin repeat domain 44 
KIDINS220             0.036   kinase D-interacting substrate of 220 kDa 
ASB14                 0.035   ankyrin repeat and SOCS box-containing 14 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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