Guide to the Human Genome
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Name: HIVEP2 Sequence: fasta or formatted (2446aa) NCBI GI: 110347463
Description:

human immunodeficiency virus type I enhancer binding protein 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1        124           3
 C cysteine            1.6         39           1
 D aspartate           4.8        117           4
 E glutamate           7.2        177           3
 F phenylalanine       2.9         70           1
 G glycine             6.3        155           2
 H histidine           3.8         92           3
 I isoleucine          3.5         86           2
 K lysine              6.3        153           3
 L leucine             7.6        186           3
 M methionine          2.5         61           1
 N asparagine          2.3         56           1
 P proline             9.8        240           2
 Q glutamine           5.8        141           3
 R arginine            4.8        118           2
 S serine             13.8        338           4
 T threonine           4.7        116           4
 V valine              4.3        106           2
 W tryptophan          0.5         12           2
 Y tyrosine            2.4         59           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   human immunodeficiency virus type I enhancer bindin... 
HIVEP3                0.206   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.206   human immunodeficiency virus type I enhancer bindin...
HIVEP1                0.145   human immunodeficiency virus type I enhancer bindin...
ZNF831                0.019   zinc finger protein 831 
ZNF358                0.010   zinc finger protein 358 
ZNF177                0.010   zinc finger protein 177 
REPIN1                0.010   replication initiator 1 isoform 1 
REPIN1                0.010   replication initiator 1 isoform 1 
REPIN1                0.010   replication initiator 1 isoform 3 
REPIN1                0.010   replication initiator 1 isoform 1 
ZNF317                0.010   zinc finger protein 317 
ZNF764                0.009   zinc finger protein 764 
ZNF561                0.009   zinc finger protein 561 
ZNF853                0.009   zinc finger protein 853 
ZNF782                0.009   zinc finger protein 782 
ZFP28                 0.009   zinc finger protein 28 
ZNF569                0.009   zinc finger protein 569 
ZNF692                0.009   zinc finger protein 692 isoform 2 
ZNF692                0.009   zinc finger protein 692 isoform 1 
ZNF721                0.009   zinc finger protein 721 
ZNF182                0.009   zinc finger protein 21 isoform 2 
ZNF182                0.009   zinc finger protein 21 isoform 1 
ZNF193                0.009   zinc finger protein 193 
ZNF837                0.008   zinc finger protein 837 isoform 1 
ZNF837                0.008   zinc finger protein 837 isoform 2 
ZNF341                0.008   zinc finger protein 341 
ZNF251                0.008   zinc finger protein 251 
ZNF567                0.008   zinc finger protein 567 
ZNF775                0.008   zinc finger protein 775 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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