Guide to the Human Genome
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Name: ARHGEF9 Sequence: fasta or formatted (516aa) NCBI GI: 7662108
Description:

Cdc42 guanine exchange factor 9

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         27           3
 C cysteine            1.9         10           1
 D aspartate           8.3         43           3
 E glutamate           7.9         41           2
 F phenylalanine       5.0         26           2
 G glycine             4.3         22           1
 H histidine           2.5         13           1
 I isoleucine          6.2         32           1
 K lysine              6.8         35           2
 L leucine             8.1         42           2
 M methionine          3.1         16           1
 N asparagine          4.7         24           2
 P proline             3.9         20           3
 Q glutamine           6.6         34           2
 R arginine            6.6         34           2
 S serine              4.8         25           2
 T threonine           2.3         12           1
 V valine              5.6         29           2
 W tryptophan          2.3         12           3
 Y tyrosine            3.7         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Cdc42 guanine exchange factor 9 
SPATA13               0.589   spermatogenesis associated 13 
ARHGEF4               0.570   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.554   Rho guanine nucleotide exchange factor 4 isoform b [...
PREX2                 0.172   DEP domain containing 2 isoform b 
PREX2                 0.172   DEP domain containing 2 isoform a 
PREX1                 0.169   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
PLEKHG1               0.101   pleckstrin homology domain containing, family G (wit...
TIAM1                 0.086   T-cell lymphoma invasion and metastasis 1 
ARHGEF7               0.080   PAK-interacting exchange factor beta isoform a [Hom...
ARHGEF7               0.080   PAK-interacting exchange factor beta isoform d [Hom...
ARHGEF7               0.080   PAK-interacting exchange factor beta isoform c [Hom...
ARHGEF7               0.080   PAK-interacting exchange factor beta isoform b [Homo...
ARHGEF7               0.080   PAK-interacting exchange factor beta isoform a 
PLEKHG2               0.078   common-site lymphoma/leukemia guanine nucleotide ex...
ITSN1                 0.076   intersectin 1 isoform ITSN-l 
ITSN2                 0.075   intersectin 2 isoform 3 
ITSN2                 0.075   intersectin 2 isoform 1 
TIAM2                 0.074   T-cell lymphoma invasion and metastasis 2 isoform b ...
TIAM2                 0.074   T-cell lymphoma invasion and metastasis 2 isoform a ...
PLEKHG3               0.072   pleckstrin homology domain containing, family G, mem...
VAV2                  0.071   vav 2 guanine nucleotide exchange factor isoform 1 ...
MCF2                  0.070   MCF.2 cell line derived transforming sequence isofo...
MCF2                  0.070   MCF.2 cell line derived transforming sequence isofo...
VAV2                  0.070   vav 2 guanine nucleotide exchange factor isoform 2 [...
VAV1                  0.069   vav 1 guanine nucleotide exchange factor 
ARHGEF6               0.061   Rac/Cdc42 guanine nucleotide exchange factor 6 [Homo...
VAV3                  0.061   vav 3 guanine nucleotide exchange factor isoform 1 ...
MCF2L                 0.060   MCF.2 cell line derived transforming sequence-like ...
MCF2L                 0.060   MCF.2 cell line derived transforming sequence-like ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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