IFT122 6807

Name: IFT122	Sequence: fasta or formatted (1131aa)		NCBI GI: 16554625
Description: WD repeat domain 10 isoform 4		Referenced in: Additional Structural Proteins WD Repeat Proteins
Other entries for this name: alt prot [1182aa] WD repeat domain 10 isoform 3 alt prot [1292aa] WD repeat domain 10 isoform 1 alt prot [1241aa] WD repeat domain 10 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 77 2 C cysteine 3.0 34 2 D aspartate 6.2 70 2 E glutamate 6.7 76 2 F phenylalanine 4.2 48 1 G glycine 5.6 63 3 H histidine 2.5 28 1 I isoleucine 6.1 69 2 K lysine 7.3 83 2 L leucine 10.9 123 3 M methionine 1.9 22 1 N asparagine 3.4 38 2 P proline 3.7 42 3 Q glutamine 4.4 50 1 R arginine 5.4 61 2 S serine 6.5 73 3 T threonine 3.7 42 1 V valine 5.7 65 3 W tryptophan 1.6 18 1 Y tyrosine 4.3 49 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 WD repeat domain 10 isoform 4 IFT122 0.987 WD repeat domain 10 isoform 3 IFT122 0.966 WD repeat domain 10 isoform 2 IFT122 0.922 WD repeat domain 10 isoform 1 LOC653712 0.070 PREDICTED: hypothetical protein LOC653712 LOC653712 0.069 PREDICTED: hypothetical LOC653712 LOC653712 0.069 PREDICTED: hypothetical LOC653712 WDR35 0.017 WD repeat domain 35 isoform 2 WDR35 0.017 WD repeat domain 35 isoform 1 WDR19 0.014 WD repeat domain 19 IFT172 0.013 selective LIM binding factor homolog EML6 0.011 echinoderm microtubule associated protein like 6 [H... WSB1 0.008 WD repeat and SOCS box-containing 1 isoform 1 WSB1 0.008 WD repeat and SOCS box-containing 1 isoform 2 UTP15 0.007 UTP15, U3 small nucleolar ribonucleoprotein, homolog... TLE1 0.007 transducin-like enhancer protein 1 EML5 0.007 echinoderm microtubule associated protein like 5 [Ho... TLE4 0.007 transducin-like enhancer protein 4 SMU1 0.007 smu-1 suppressor of mec-8 and unc-52 homolog TAF5 0.006 TBP-associated factor 5 TLE3 0.006 transducin-like enhancer protein 3 isoform b TLE3 0.006 transducin-like enhancer protein 3 isoform c TLE3 0.006 transducin-like enhancer protein 3 isoform a IFT80 0.006 WD repeat domain 56 TAF5L 0.006 PCAF associated factor 65 beta isoform a WSB2 0.006 WD SOCS-box protein 2 WDR51B 0.006 WD repeat domain 51B WDR5 0.005 WD repeat domain 5 WDR5 0.005 WD repeat domain 5 WDR51A 0.005 WD repeat domain 51A isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.