IFT172 30207

Name: IFT172	Sequence: fasta or formatted (1749aa)		NCBI GI: 46358428
Description: selective LIM binding factor homolog		Referenced in: LIM Domain Proteins Additional Structural Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 178 3 C cysteine 1.8 31 2 D aspartate 5.0 87 2 E glutamate 9.0 158 2 F phenylalanine 3.1 55 2 G glycine 6.5 113 3 H histidine 2.7 48 2 I isoleucine 4.6 81 2 K lysine 6.5 114 2 L leucine 10.2 178 3 M methionine 2.1 37 1 N asparagine 3.7 64 2 P proline 2.7 48 2 Q glutamine 4.1 72 2 R arginine 5.3 93 2 S serine 4.9 86 2 T threonine 4.7 83 2 V valine 6.5 114 2 W tryptophan 1.8 31 1 Y tyrosine 4.5 78 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 selective LIM binding factor homolog IFT80 0.011 WD repeat domain 56 IFT122 0.008 WD repeat domain 10 isoform 4 IFT122 0.008 WD repeat domain 10 isoform 3 IFT122 0.008 WD repeat domain 10 isoform 2 IFT122 0.008 WD repeat domain 10 isoform 1 WDR5B 0.008 WD repeat domain 5B IFT140 0.007 intraflagellar transport 140 WDR19 0.007 WD repeat domain 19 WDR35 0.006 WD repeat domain 35 isoform 2 WDR35 0.006 WD repeat domain 35 isoform 1 TBL1X 0.005 transducin beta-like 1X isoform b TBL1X 0.005 transducin beta-like 1X isoform b TBL1X 0.005 transducin beta-like 1X isoform a TBL1X 0.005 transducin beta-like 1X isoform a TBL1Y 0.005 transducin beta-like 1Y TBL1Y 0.005 transducin beta-like 1Y TBL1Y 0.005 transducin beta-like 1Y ARPC1B 0.005 actin related protein 2/3 complex subunit 1B GNB5 0.005 guanine nucleotide-binding protein, beta-5 subunit is... GNB5 0.005 guanine nucleotide-binding protein, beta-5 subunit i... TBL1XR1 0.005 transducin (beta)-like 1 X-linked receptor 1 CEP152 0.005 centrosomal protein 152kDa WDR31 0.005 WD repeat domain 31 isoform 1 WDR31 0.005 WD repeat domain 31 isoform 3 GNB1 0.004 guanine nucleotide-binding protein, beta-1 subunit [... GNB2 0.004 guanine nucleotide-binding protein, beta-2 subunit [... GNB4 0.004 guanine nucleotide-binding protein, beta-4 subunit [... GNB3 0.004 guanine nucleotide-binding protein, beta-3 subunit [H... LRRFIP1 0.003 leucine rich repeat (in FLII) interacting protein 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.