Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ACOT11 Sequence: fasta or formatted (607aa) NCBI GI: 22165355
Description:

thioesterase, adipose associated isoform BFIT1

Referenced in:

Adipose Tissue

Other entries for this name:
alt prot [594aa] thioesterase, adipose associated isoform BFIT2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         48           2
 C cysteine            2.6         16           2
 D aspartate           5.3         32           2
 E glutamate           6.4         39           3
 F phenylalanine       2.8         17           1
 G glycine             5.4         33           2
 H histidine           3.1         19           1
 I isoleucine          4.0         24           1
 K lysine              4.9         30           2
 L leucine             8.7         53           3
 M methionine          2.6         16           1
 N asparagine          4.0         24           2
 P proline             4.0         24           2
 Q glutamine           4.4         27           2
 R arginine            8.1         49           3
 S serine              7.9         48           2
 T threonine           4.9         30           2
 V valine              8.6         52           2
 W tryptophan          1.8         11           1
 Y tyrosine            2.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioesterase, adipose associated isoform BFIT1 [Homo... 
ACOT11                0.890   thioesterase, adipose associated isoform BFIT2 [Homo...
ACOT12                0.376   acyl-CoA thioesterase 12 
ACOT7                 0.047   acyl-CoA thioesterase 7 isoform hBACHa 
ACOT7                 0.045   acyl-CoA thioesterase 7 isoform hBACHd 
ACOT7                 0.042   acyl-CoA thioesterase 7 isoform hBACHc 
ACOT7                 0.041   acyl-CoA thioesterase 7 isoform hBACHb 
STARD3                0.013   StAR-related lipid transfer (START) domain containin...
STARD6                0.012   START domain containing protein 6 
STARD13               0.007   StAR-related lipid transfer (START) domain containin...
STARD13               0.007   StAR-related lipid transfer (START) domain containin...
STARD13               0.007   StAR-related lipid transfer (START) domain containin...
DQX1                  0.006   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
STARD8                0.006   StAR-related lipid transfer (START) domain containi...
STARD8                0.006   StAR-related lipid transfer (START) domain containi...
STARD8                0.006   StAR-related lipid transfer (START) domain containin...
HOXB8                 0.006   homeobox B8 
HOXD8                 0.005   homeobox D8 
POLR2A                0.005   DNA-directed RNA polymerase II A 
TRIM55                0.005   tripartite motif-containing 55 isoform 3 
TRIM55                0.005   tripartite motif-containing 55 isoform 1 
TRIM55                0.005   tripartite motif-containing 55 isoform 2 
SMC1B                 0.004   SMC1 structural maintenance of chromosomes 1-like 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press