Guide to the Human Genome
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Name: HOMEZ Sequence: fasta or formatted (550aa) NCBI GI: 158631177
Description:

homeodomain leucine zipper protein

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         35           2
 C cysteine            1.5          8           1
 D aspartate           4.9         27           8
 E glutamate           9.8         54           9
 F phenylalanine       2.5         14           2
 G glycine             5.3         29           1
 H histidine           2.4         13           2
 I isoleucine          3.8         21           2
 K lysine              4.2         23           1
 L leucine             9.1         50           2
 M methionine          1.3          7           1
 N asparagine          1.5          8           1
 P proline            12.4         68           5
 Q glutamine           7.6         42           2
 R arginine            4.9         27           2
 S serine              9.8         54           4
 T threonine           4.9         27           2
 V valine              4.0         22           3
 W tryptophan          2.2         12           1
 Y tyrosine            1.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   homeodomain leucine zipper protein 
ZHX1                  0.076   zinc fingers and homeoboxes 1 
ZHX1                  0.076   zinc fingers and homeoboxes 1 
ZHX3                  0.070   zinc fingers and homeoboxes 3 
ZHX2                  0.046   zinc fingers and homeoboxes 2 
SCAF1                 0.028   SR-related CTD-associated factor 1 
ZFHX3                 0.025   AT-binding transcription factor 1 
WASL                  0.024   Wiskott-Aldrich syndrome gene-like protein 
BAT2                  0.024   HLA-B associated transcript-2 
MYT1                  0.023   myelin transcription factor 1 
HMGB1                 0.022   high-mobility group box 1 
PELP1                 0.022   proline, glutamic acid and leucine rich protein 1 [...
RANGAP1               0.022   Ran GTPase activating protein 1 
ZBTB7C                0.022   zinc finger and BTB domain containing 7C 
LOC645490             0.022   PREDICTED: similar to hCG1991922 
CASZ1                 0.022   castor homolog 1, zinc finger isoform a 
ANP32E                0.022   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.022   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.022   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
FUSSEL18              0.022   PREDICTED: functional smad suppressing element 18 [...
TTBK1                 0.022   tau tubulin kinase 1 
MYST4                 0.022   MYST histone acetyltransferase (monocytic leukemia)...
LOC645490             0.021   PREDICTED: similar to hCG1991922 
HMGB1L1               0.021   high-mobility group box 1-like 1 
HUWE1                 0.021   HECT, UBA and WWE domain containing 1 
CHD3                  0.021   chromodomain helicase DNA binding protein 3 isoform...
ARID4B                0.021   AT rich interactive domain 4B isoform 1 
EHMT2                 0.020   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.020   euchromatic histone-lysine N-methyltransferase 2 is...
KIAA1429              0.020   hypothetical protein LOC25962 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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