Guide to the Human Genome
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Name: ZBTB7C Sequence: fasta or formatted (619aa) NCBI GI: 86262149
Description:

zinc finger and BTB domain containing 7C

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         55           3
 C cysteine            2.6         16           1
 D aspartate           7.4         46           5
 E glutamate           8.6         53           9
 F phenylalanine       5.0         31           2
 G glycine             6.9         43           2
 H histidine           3.9         24           1
 I isoleucine          3.9         24           1
 K lysine              5.2         32           2
 L leucine             9.7         60           2
 M methionine          2.3         14           1
 N asparagine          3.4         21           2
 P proline             9.4         58           7
 Q glutamine           3.4         21           2
 R arginine            5.2         32           2
 S serine              4.5         28           2
 T threonine           3.2         20           1
 V valine              3.6         22           2
 W tryptophan          0.6          4           1
 Y tyrosine            2.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 7C 
ZBTB7B                0.245   zinc finger and BTB domain containing 7B 
LOC100293130          0.245   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.245   PREDICTED: similar to kruppel-related zinc finger p...
LOC100293130          0.245   PREDICTED: similar to kruppel-related zinc finger p...
ZBTB7A                0.168   zinc finger and BTB domain containing 7A 
ZIC5                  0.075   zinc finger protein of the cerebellum 5 
ZNF358                0.071   zinc finger protein 358 
ZNF205                0.069   zinc finger protein 205 
ZNF205                0.069   zinc finger protein 205 
ZNF559                0.068   zinc finger protein 559 
ZSCAN5B               0.068   zinc finger and SCAN domain containing 5B 
ZNF233                0.068   zinc finger protein 233 
ZNF467                0.068   zinc finger protein 467 
ZNF263                0.068   zinc finger protein 263 
ZNF778                0.068   zinc finger protein 778 
ZNF544                0.067   zinc finger protein 544 
ZNF629                0.067   zinc finger protein 629 
ZNF184                0.067   zinc finger protein 184 
ZNF551                0.067   zinc finger protein 551 
ZSCAN5A               0.067   zinc finger and SCAN domain containing 5A 
ZNF470                0.067   zinc finger protein 470 
LOC169834             0.067   hypothetical protein LOC169834 
ZNF473                0.066   zinc finger protein 473 
ZNF473                0.066   zinc finger protein 473 
ZNF837                0.066   zinc finger protein 837 isoform 1 
ZNF837                0.066   zinc finger protein 837 isoform 2 
LOC400713             0.066   zinc finger protein LOC400713 
ZFP112                0.065   zinc finger protein 228 isoform 1 
ZFP112                0.065   zinc finger protein 228 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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