Guide to the Human Genome
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Name: TTC24 Sequence: fasta or formatted (302aa) NCBI GI: 157785672
Description:

tetratricopeptide repeat domain 24

Referenced in:

Tetratricopeptide Domains

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         37           4
 C cysteine            2.0          6           1
 D aspartate           3.0          9           1
 E glutamate           6.3         19           2
 F phenylalanine       2.3          7           1
 G glycine             9.9         30           2
 H histidine           4.3         13           2
 I isoleucine          1.3          4           1
 K lysine              4.3         13           3
 L leucine             7.9         24           1
 M methionine          1.0          3           1
 N asparagine          2.3          7           1
 P proline             7.0         21           2
 Q glutamine           6.6         20           1
 R arginine            8.3         25           2
 S serine              8.6         26           3
 T threonine           4.3         13           1
 V valine              4.6         14           1
 W tryptophan          1.3          4           1
 Y tyrosine            2.3          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat domain 24 
TTC28                 0.064   tetratricopeptide repeat domain 28 
GPSM1                 0.049   G-protein signaling modulator 1 (AGS3-like, C. eleg...
GPSM1                 0.049   G-protein signaling modulator 1 (AGS3-like, C. eleg...
GPSM2                 0.044   LGN protein 
LOC730032             0.020   PREDICTED: similar to Rho guanine nucleotide exchan...
MLLT10                0.017   myeloid/lymphoid or mixed-lineage leukemia transloca...
MLLT10                0.017   myeloid/lymphoid or mixed-lineage leukemia translocat...
CCDC153               0.015   coiled-coil domain containing 153 
CASKIN2               0.013   cask-interacting protein 2 isoform b 
CASKIN2               0.013   cask-interacting protein 2 isoform a 
EML3                  0.013   echinoderm microtubule associated protein like 3 [H...
KCNH3                 0.013   potassium voltage-gated channel, subfamily H (eag-re...
ABR                   0.013   active breakpoint cluster region-related  protein i...
ABR                   0.013   active breakpoint cluster region-related  protein is...
ABR                   0.013   active breakpoint cluster region-related  protein is...
SPPL2B                0.013   signal peptide peptidase-like 2B isoform 2 
TMTC1                 0.013   transmembrane and tetratricopeptide repeat containin...
SFRS8                 0.013   splicing factor, arginine/serine-rich 8 
LOC100292268          0.012   PREDICTED: hypothetical protein 
LOC100288159          0.012   PREDICTED: hypothetical protein 
LOC100288159          0.012   PREDICTED: hypothetical protein XP_002343179 
HTT                   0.012   huntingtin 
LOC100293818          0.012   PREDICTED: hypothetical protein 
TTC25                 0.012   tetratricopeptide repeat domain 25 
VEGFA                 0.010   vascular endothelial growth factor A isoform f precu...
VEGFA                 0.010   vascular endothelial growth factor A isoform e precu...
VEGFA                 0.010   vascular endothelial growth factor A isoform d precu...
VEGFA                 0.010   vascular endothelial growth factor A isoform c precu...
VEGFA                 0.010   vascular endothelial growth factor A isoform b precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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