GPSM2 6729

Name: GPSM2	Sequence: fasta or formatted (684aa)		NCBI GI: 164519122
Description: LGN protein		Referenced in: G Proteins Tetratricopeptide Domains
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 56 2 C cysteine 1.9 13 2 D aspartate 7.0 48 2 E glutamate 6.9 47 2 F phenylalanine 3.9 27 2 G glycine 6.3 43 1 H histidine 2.9 20 3 I isoleucine 3.2 22 1 K lysine 6.0 41 2 L leucine 12.1 83 3 M methionine 2.0 14 2 N asparagine 6.0 41 2 P proline 2.6 18 3 Q glutamine 4.7 32 1 R arginine 6.1 42 2 S serine 8.0 55 2 T threonine 4.7 32 3 V valine 3.9 27 2 W tryptophan 0.3 2 1 Y tyrosine 3.1 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 LGN protein GPSM1 0.513 G-protein signaling modulator 1 (AGS3-like, C. eleg... GPSM1 0.393 G-protein signaling modulator 1 (AGS3-like, C. eleg... TTC28 0.139 tetratricopeptide repeat domain 28 GPSM1 0.089 G-protein signaling modulator 1 (AGS3-like, C. eleg... PCP2 0.030 Purkinje cell protein 2 NFKBIL2 0.024 NF-kappa-B inhibitor-like protein 2 RAPSN 0.024 43 kD receptor-associated protein of the synapse iso... RAPSN 0.024 43 kD receptor-associated protein of the synapse iso... TTC25 0.022 tetratricopeptide repeat domain 25 TTC24 0.019 tetratricopeptide repeat domain 24 TTC29 0.019 tetratricopeptide repeat domain 29 SH3TC1 0.018 SH3 domain and tetratricopeptide repeats 1 SH3TC2 0.017 SH3 domain and tetratricopeptide repeats 2 OGT 0.016 O-linked GlcNAc transferase isoform 2 OGT 0.016 O-linked GlcNAc transferase isoform 1 GPSM3 0.015 G-protein signaling modulator 3 (AGS3-like, C. elega... TMTC1 0.015 transmembrane and tetratricopeptide repeat containin... IFT88 0.014 intraflagellar transport 88 homolog isoform 1 IFT88 0.014 intraflagellar transport 88 homolog isoform 2 TTC13 0.010 tetratricopeptide repeat domain 13 isoform b TTC13 0.010 tetratricopeptide repeat domain 13 isoform a RAP1GAP 0.010 RAP1 GTPase activating protein isoform a TMTC2 0.009 transmembrane and tetratricopeptide repeat containin... TTC21B 0.009 tetratricopeptide repeat domain 21B AP1GBP1 0.008 AP1 gamma subunit binding protein 1 isoform 2 AP1GBP1 0.008 AP1 gamma subunit binding protein 1 isoform 1 TTC12 0.007 tetratricopeptide repeat domain 12 SAFB 0.007 scaffold attachment factor B STIP1 0.007 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.