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Search of human proteins with 156671219
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156671219 epsin 2 isoform c [Homo sapiens]
(356 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156671219 epsin 2 isoform c [Homo sapiens] 712 0.0
gi|156671217 epsin 2 isoform a [Homo sapiens] 712 0.0
gi|156671215 epsin 2 isoform b [Homo sapiens] 712 0.0
gi|194272148 epsin 1 isoform a [Homo sapiens] 189 3e-48
gi|41350201 epsin 1 isoform c [Homo sapiens] 188 7e-48
gi|194248095 epsin 1 isoform b [Homo sapiens] 185 5e-47
gi|157388929 epsin 3 [Homo sapiens] 108 7e-24
gi|116284392 mucin 2 precursor [Homo sapiens] 54 3e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 53 5e-07
gi|206597507 HIV-1 Rev binding protein isoform 3 [Homo sapiens] 52 6e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 52 1e-06
gi|41281612 zinc finger protein 828 [Homo sapiens] 50 3e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 3e-06
gi|33946327 nucleoporin 214kDa [Homo sapiens] 49 7e-06
gi|206597505 HIV-1 Rev binding protein isoform 1 [Homo sapiens] 49 7e-06
gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens] 49 7e-06
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 49 9e-06
gi|221139926 NHS-like 1 [Homo sapiens] 48 2e-05
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 48 2e-05
gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens] 48 2e-05
gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo ... 47 2e-05
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 47 2e-05
gi|38261962 activating transcription factor 7 interacting protei... 47 3e-05
gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens] 45 8e-05
gi|154146199 sal-like 3 [Homo sapiens] 45 1e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 44 3e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 44 3e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 44 3e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 44 3e-04
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 43 4e-04
>gi|156671219 epsin 2 isoform c [Homo sapiens]
Length = 356
Score = 712 bits (1837), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG
Sbjct: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
Query: 61 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 120
PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP
Sbjct: 61 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 120
Query: 121 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 180
KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR
Sbjct: 121 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 180
Query: 181 TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL 240
TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL
Sbjct: 181 TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL 240
Query: 241 VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV 300
VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV
Sbjct: 241 VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV 300
Query: 301 ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL 356
ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL
Sbjct: 301 ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL 356
>gi|156671217 epsin 2 isoform a [Homo sapiens]
Length = 584
Score = 712 bits (1837), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG
Sbjct: 229 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 288
Query: 61 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 120
PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP
Sbjct: 289 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 348
Query: 121 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 180
KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR
Sbjct: 349 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 408
Query: 181 TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL 240
TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL
Sbjct: 409 TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL 468
Query: 241 VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV 300
VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV
Sbjct: 469 VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV 528
Query: 301 ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL 356
ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL
Sbjct: 529 ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL 584
>gi|156671215 epsin 2 isoform b [Homo sapiens]
Length = 641
Score = 712 bits (1837), Expect = 0.0
Identities = 356/356 (100%), Positives = 356/356 (100%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG
Sbjct: 286 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 345
Query: 61 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 120
PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP
Sbjct: 346 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 405
Query: 121 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 180
KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR
Sbjct: 406 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 465
Query: 181 TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL 240
TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL
Sbjct: 466 TSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSL 525
Query: 241 VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV 300
VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV
Sbjct: 526 VTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGV 585
Query: 301 ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL 356
ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL
Sbjct: 586 ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFLL 641
>gi|194272148 epsin 1 isoform a [Homo sapiens]
Length = 662
Score = 189 bits (480), Expect = 3e-48
Identities = 147/408 (36%), Positives = 186/408 (45%), Gaps = 102/408 (25%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
MS+E A+QEER+RRGDDLRLQMA+EES+R+T KE SL + P++
Sbjct: 305 MSKEEADQEERIRRGDDLRLQMAIEESKRET----GGKEESSLMDLADVFTAPAPAPTTD 360
Query: 61 P-------------AAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA---- 103
P AA ++PWG +PWGGPA ++ DPW +PAA
Sbjct: 361 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW-----RPAAPAGP 415
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAW-------------GAVSTT 150
S+DPWG T A DPW +S +G ASD W A +T
Sbjct: 416 SVDPWG-GTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPST 474
Query: 151 KPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAES--------VTSLPSQNNGTTSP 202
+ +G F+ T D+FS+FD LRT+ T+ S +P+++ G
Sbjct: 475 NGTTAAGGFD-------TEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDM 527
Query: 203 DPFESQPLTVASSKPSSA--------RKTPESFLGPNAALVNLDSLVTRPAPP---AQSL 251
S P +A RKTPESFLGPNAALV+LDSLV+RP P A++
Sbjct: 528 SGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKAS 587
Query: 252 NPFLAPGAPATSAPV-NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTS 310
NPFL G PAT V NPFQ P LTLNQLR SPV
Sbjct: 588 NPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV----------------------- 624
Query: 311 AAPQPALGATGSSLTPLGPAMMNMVGSVGIPP--SAAQATGTTNPFLL 356
P GA + ++PLG G G+PP TNPFLL
Sbjct: 625 ---PPVPGAPPTYISPLG-------GGPGLPPMMPPGPPAPNTNPFLL 662
>gi|41350201 epsin 1 isoform c [Homo sapiens]
Length = 550
Score = 188 bits (477), Expect = 7e-48
Identities = 148/407 (36%), Positives = 186/407 (45%), Gaps = 101/407 (24%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
MS+E A+QEER+RRGDDLRLQMA+EES+R+T KE SL + P++
Sbjct: 194 MSKEEADQEERIRRGDDLRLQMAIEESKRET----GGKEESSLMDLADVFTAPAPAPTTD 249
Query: 61 P-------------AAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA---- 103
P AA ++PWG +PWGGPA ++ DPW +PAA
Sbjct: 250 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW-----RPAAPAGP 304
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAV---------STTKPV- 153
S+DPWG T A DPW +S +G ASD W S KP
Sbjct: 305 SVDPWG-GTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPST 363
Query: 154 --SVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAES--------VTSLPSQNNGTTSPD 203
+ +G F+ T D+FS+FD LRT+ T+ S +P+++ G
Sbjct: 364 NGTTAGGFD-------TEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDMS 416
Query: 204 PFESQPLTVASSKPSSA--------RKTPESFLGPNAALVNLDSLVTRPAPP---AQSLN 252
S P +A RKTPESFLGPNAALV+LDSLV+RP P A++ N
Sbjct: 417 GVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKASN 476
Query: 253 PFLAPGAPATSAPV-NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSA 311
PFL G PAT V NPFQ P LTLNQLR SPV
Sbjct: 477 PFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV------------------------ 512
Query: 312 APQPALGATGSSLTPLGPAMMNMVGSVGIPP--SAAQATGTTNPFLL 356
P GA + ++PLG G G+PP TNPFLL
Sbjct: 513 --PPVPGAPPTYISPLG-------GGPGLPPMMPPGPPAPNTNPFLL 550
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 185 bits (470), Expect = 5e-47
Identities = 145/408 (35%), Positives = 185/408 (45%), Gaps = 102/408 (25%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSG 60
+SRE ++EER+RRGDDLRLQMA+EES+R+T KE SL + P++
Sbjct: 219 LSREEHDKEERIRRGDDLRLQMAIEESKRET----GGKEESSLMDLADVFTAPAPAPTTD 274
Query: 61 P-------------AAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA---- 103
P AA ++PWG +PWGGPA ++ DPW +PAA
Sbjct: 275 PWGGPAPMAAAVPTAAPTSDPWGGPPVPPAADPWGGPAPTPASGDPW-----RPAAPAGP 329
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWG-------------AVSTT 150
S+DPWG T A DPW +S +G ASD W A +T
Sbjct: 330 SVDPWG-GTPAPAAGEGPTPDPWGSSDGGVPVSGPSASDPWTPAPAFSDPWGGSPAKPST 388
Query: 151 KPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTS--------LPSQNNGTTSP 202
+ +G F+ T D+FS+FD LRT+ T+ S +P+++ G
Sbjct: 389 NGTTAAGGFD-------TEPDEFSDFDRLRTALPTSGSSAGELELLAGEVPARSPGAFDM 441
Query: 203 DPFESQPLTVASSKPSSA--------RKTPESFLGPNAALVNLDSLVTRPAPP---AQSL 251
S P +A RKTPESFLGPNAALV+LDSLV+RP P A++
Sbjct: 442 SGVRGSLAEAVGSPPPAATPTPTPPTRKTPESFLGPNAALVDLDSLVSRPGPTPPGAKAS 501
Query: 252 NPFLAPGAPATSAPV-NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTS 310
NPFL G PAT V NPFQ P LTLNQLR SPV
Sbjct: 502 NPFLPGGGPATGPSVTNPFQPAPPATLTLNQLRLSPV----------------------- 538
Query: 311 AAPQPALGATGSSLTPLGPAMMNMVGSVGIPP--SAAQATGTTNPFLL 356
P GA + ++PLG G G+PP TNPFLL
Sbjct: 539 ---PPVPGAPPTYISPLG-------GGPGLPPMMPPGPPAPNTNPFLL 576
>gi|157388929 epsin 3 [Homo sapiens]
Length = 632
Score = 108 bits (270), Expect = 7e-24
Identities = 129/430 (30%), Positives = 184/430 (42%), Gaps = 92/430 (21%)
Query: 1 MSREVAEQE--ERLRRGDDLRLQMALEESR------------------------------ 28
MSRE AE+ R +DL+LQ+AL SR
Sbjct: 220 MSREEAEKPVPPASHRDEDLQLQLALRLSRQEHEKEVRSWQGDGSPMANGAGAVVHHQRD 279
Query: 29 RDTVKIPKKKEHGSLPQQTTLLDLMDA-LPSSGPAAQ--KAEPW-------GPSASTNQT 78
R+ + +K+E Q+++LDL D +P+ P + A+PW AS +
Sbjct: 280 REPEREERKEEEKLKTSQSSILDLADIFVPALAPPSTHCSADPWDIPGFRPNTEASGSSW 339
Query: 79 NPWGGPAAPA------STSDPWPSFGTKPAASIDPWG----VPTGATVQSVPKNSDPWAA 128
P P +P S S PW T +S +PWG +P G P +DPWA
Sbjct: 340 GPSADPWSPIPSGTVLSRSQPWDL--TPMLSSSEPWGRTPVLPAG------PPTTDPWAL 391
Query: 129 SQQPASSAGKRASDAWGA-VSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAE 187
+ P +D WGA + T+ + +F+ F+ + + L + K ++
Sbjct: 392 NS-PHHKLPSTGADPWGASLETSDTPGGASTFDPFAKPPESTETKEGLEQALPSGKPSSP 450
Query: 188 SVTSL------PSQNNGTTSPDPFESQPLTVASSKPSS---ARKTPESFLGPNA-ALVNL 237
L S+ NGT PD + L A ++PS A +TPESFLGP+A +LVNL
Sbjct: 451 VELDLFGDPSPSSKQNGTKEPDALDLGILGEALTQPSKEARACRTPESFLGPSASSLVNL 510
Query: 238 DSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLR-GSPVLGTSTSFGP 296
DSLV P A++ NPFL G A S P NPF +P TLNQ+R GSP LG
Sbjct: 511 DSLVKAP-QVAKTRNPFLT-GLSAPS-PTNPFGAGEPGRPTLNQMRTGSPALG----LAG 563
Query: 297 GPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVG----IP-PSAA------ 345
GP + + +++ P P P ++ G+ +P PS+A
Sbjct: 564 GPVGAPLGSMTYSASLPLPLSSVPAGLTLPASVSVFPQAGAFAPQPLLPTPSSAGPRPPP 623
Query: 346 QATGTTNPFL 355
TG TNPFL
Sbjct: 624 PQTG-TNPFL 632
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 53.5 bits (127), Expect = 3e-07
Identities = 71/303 (23%), Positives = 107/303 (35%), Gaps = 44/303 (14%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATV 116
P++ P+ P P AST P P+ P +T+ P T + P PT T
Sbjct: 1496 PTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTT- 1554
Query: 117 QSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEF 176
++P + P S P ++ + +TT P + + T +
Sbjct: 1555 -TLPPTTTP---SPPPTTTTTPPPTTTPSPPTTTTPSPPTIT---------TTTPPPTTT 1601
Query: 177 DNLRTSKKTAESVTSLPSQNNGT--TSPDPFESQPLTVASSKPSSARKTPESFLGPNAAL 234
+ T+ T T+ PS T T P + P T S P + TP P+
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPS--- 1658
Query: 235 VNLDSLVTRPAPPAQSLN---PFLAPGAPATSAPVNP-FQVNQPQPLTLNQLRGSPVLGT 290
T P+PP + P P +P T+ P P + P P T SP+ T
Sbjct: 1659 ---PPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTT---TPSSPITTT 1712
Query: 291 STSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGT 350
+T +S T+ +P P T S T P M +PP+ + T
Sbjct: 1713 TTP------------SSTTTPSPPPTTMTTPSPTTTPSPPTTTM---TTLPPTTTSSPLT 1757
Query: 351 TNP 353
T P
Sbjct: 1758 TTP 1760
Score = 45.4 bits (106), Expect = 8e-05
Identities = 55/287 (19%), Positives = 94/287 (32%), Gaps = 22/287 (7%)
Query: 44 PQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA 103
P T + P+ P + P +T P P T P + T
Sbjct: 4058 PTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITT-TT 4113
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFS 163
++ P PTG + + + P + + TT P++ + +
Sbjct: 4114 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQ--------TPTTTPITTTTTVTPTP 4165
Query: 164 NLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQ-PLT-VASSKPSSAR 221
GT T T +VT P+ T P S P+ + +S P
Sbjct: 4166 TPTGTQTPT-------TTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPPES 4218
Query: 222 KTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQ 281
TP++ ++ L +L++ PPA + P P + P P T
Sbjct: 4219 STPQTSRSTSSPLTESTTLLST-LPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTS 4277
Query: 282 LRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLG 328
G+P GT+T P ++ + ++ P P +T S + G
Sbjct: 4278 PPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTG 4324
Score = 45.1 bits (105), Expect = 1e-04
Identities = 41/175 (23%), Positives = 63/175 (36%), Gaps = 14/175 (8%)
Query: 181 TSKKTAESVTSLPSQNNGTTSPDPFE--SQPLTVASSKPSSARKTPESFLGPNAALVNLD 238
TS T T+ TT+P P S P+T ++ P P + P +
Sbjct: 1411 TSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPP------PTTTPSPPISTTTTP 1464
Query: 239 SLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGP 298
T P+PP + +P +P T+ P P P T + +P T+T P
Sbjct: 1465 PPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI--TPPASTTTL----P 1518
Query: 299 GVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNP 353
+ + + T+ P P + + TP+ P PS T TT P
Sbjct: 1519 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1573
Score = 38.5 bits (88), Expect = 0.009
Identities = 58/324 (17%), Positives = 99/324 (30%), Gaps = 27/324 (8%)
Query: 44 PQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA 103
P T + P+ P + P +T P P T P + T
Sbjct: 3943 PTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP---TPTPTGTQTPTTTPITT-TT 3998
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFS 163
++ P PTG + + + P + + TT P++ + +
Sbjct: 3999 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQ--------TPTTTPITTTTTVTPTP 4050
Query: 164 NLNGTIKDDFSEFDNLRTSKKT-----AESVTSLPSQNNGTTSPDPFESQPLT-----VA 213
GT + T T ++ T+ P T +P P + T +
Sbjct: 4051 TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPIT 4110
Query: 214 SSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPF---- 269
++ + TP P + + VT P + P P T+ P
Sbjct: 4111 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 4170
Query: 270 QVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGP 329
Q P+T T T GP + +A +T++ P P +S + P
Sbjct: 4171 QTPTTTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSP 4230
Query: 330 AMMNMVGSVGIPPSAAQATGTTNP 353
+ +PP A + T T P
Sbjct: 4231 LTESTTLLSTLPP-AIEMTSTAPP 4253
Score = 35.0 bits (79), Expect = 0.10
Identities = 51/235 (21%), Positives = 82/235 (34%), Gaps = 27/235 (11%)
Query: 44 PQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA 103
P TT S P P P+ +T P P+ P +T+ P T
Sbjct: 1564 PPPTTTTTPPPTTTPSPPTTTTPSP--PTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPP 1621
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFS 163
+ P PT T ++P + P S P ++ + +TT P S +
Sbjct: 1622 TTTPITPPTSTT--TLPPTTTP---SPPPTTTTTPPPTTTPSPPTTTTP-SPPITTTTTP 1675
Query: 164 NLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQN-------NGTTSPDPFESQPLTVASSK 216
T + + T+ T S T+ PS + TT+P P P T+ +
Sbjct: 1676 PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSP---PPTTMTTPS 1732
Query: 217 PSSARKTPESFLGPNAALVNLDSLVTRPAPPA---QSLNPFLAPGAPATSAPVNP 268
P++ P + + L T P PP+ + +PF +T+ P P
Sbjct: 1733 PTTTPSPPTTTMTTLPPTTTSSPLTTTPLPPSITPPTFSPF------STTTPTTP 1781
Score = 31.6 bits (70), Expect = 1.1
Identities = 38/177 (21%), Positives = 58/177 (32%), Gaps = 7/177 (3%)
Query: 178 NLRTSKKTAESVTSLPSQNNGTT-SPDPFESQPLTVASSKPSSARKTPESFLGPNAALVN 236
N + + E VT + TT +P P + P+T ++ + TP P +
Sbjct: 1868 NYEINVQCCECVTQPTTMTTTTTENPTPPTTTPITTTTTVTPTP--TPTGTQTPTTTPIT 1925
Query: 237 LDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGP 296
+ VT P + P P T+ P P T + V T T G
Sbjct: 1926 TTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT 1985
Query: 297 GPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNP 353
+ + + T+ P P TG+ TP + P T TT P
Sbjct: 1986 QTPT-TTPITTTTTVTPTPT--PTGTQ-TPTTTPITTTTTVTPTPTPTGTQTPTTTP 2038
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 52.8 bits (125), Expect = 5e-07
Identities = 84/312 (26%), Positives = 116/312 (37%), Gaps = 35/312 (11%)
Query: 57 PSSGP-----AAQKAEPWGPS-ASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPW-- 108
P+ GP +A + PS A+ + + GG PAS S + A P
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Query: 109 GVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGT 168
G P S PK A + K A+ A G +S++ + S S L S T
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT 320
Query: 169 IKDDFSEFDNLRTSKKTAESVTSLP-------SQNNGTTSPDPFESQPLTVASSKPSSAR 221
+ +S T + T LP + + T P P + P +S S
Sbjct: 321 LPA------TPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTL 374
Query: 222 KTPESFLGPNAALVNLDSLVTRP--APPAQSLNPFLAPGAPATSAPVNPFQVNQPQ---P 276
+ SFL P+ L L T P APPA +L P AP +P S P++P PQ
Sbjct: 375 QATHSFL-PSPPL---SPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNA 430
Query: 277 LTLNQLRG----SPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMM 332
L ++ L+ P F P A+ S AP P+L A + P PA
Sbjct: 431 LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP-PSLAAPPLQVPPSPPASP 489
Query: 333 NMVGSVGIPPSA 344
M S PP A
Sbjct: 490 PMSPSATPPPQA 501
Score = 38.9 bits (89), Expect = 0.007
Identities = 82/342 (23%), Positives = 119/342 (34%), Gaps = 31/342 (9%)
Query: 35 PKKKEHGSLPQQTTLLDLMDALPSSGPAAQK--AEPWGPSASTNQTNPWGGPAAPASTSD 92
PK K +L DA P+ GP + A P PSA+ P PA P S+S
Sbjct: 272 PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATP-SPSAALQSQAPPTLPATPHSSSL 330
Query: 93 PWPSFGTKPAASIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKP 152
P A P P+ +Q++P S P Q +S G A + + P
Sbjct: 331 TCQLATPLPLAPPSPSAPPS---LQTLP--SPPATPPSQATTSLGSPTLQATHSFLPSPP 385
Query: 153 VSVSGSFE-----------LFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTS 201
+S + L + + S A +V L Q +
Sbjct: 386 LSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL--QAPFSPP 443
Query: 202 PDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPA 261
P P P + +S P S TP S P+ A L + PA P S + P AP
Sbjct: 444 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 503
Query: 262 TSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPG------VESMAVASMTSAAPQ- 314
A P Q+ +P P L P+ + PG S+ ++ + + PQ
Sbjct: 504 PLA-APPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 562
Query: 315 -PALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFL 355
P L A + P PA + + PP+ T + P L
Sbjct: 563 PPVLAAPLLQVPPSPPASPTL-QAPRRPPTPGPDTSVSGPRL 603
Score = 36.2 bits (82), Expect = 0.046
Identities = 67/307 (21%), Positives = 100/307 (32%), Gaps = 53/307 (17%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATV 116
P+S P A P A P P + T+ P P G K V G
Sbjct: 90 PASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP-LGQKGLRISAEETVARGKAT 148
Query: 117 QSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEF 176
++ PK S A SAG R + T P S
Sbjct: 149 EA-PKRS---------ALSAGARRDTSGPTPGTPSPAMARRS------------------ 180
Query: 177 DNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVAS-SKPSSARKTPESFLGPNA--- 232
+ A + LP P E +V+S S+ S+ +P + P+A
Sbjct: 181 -------RAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGG 233
Query: 233 ----ALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVL 288
A +L S T + PA+S G A P P +QP+P L LR P
Sbjct: 234 LQRPASRSLSSSATPLSSPARS-------GPSARGTPRAPAHPSQPKPKGLQALR--PPQ 284
Query: 289 GTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQAT 348
T P + ++ + + + +P AL + P P ++ + P A +
Sbjct: 285 VTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPS 344
Query: 349 GTTNPFL 355
+ P L
Sbjct: 345 PSAPPSL 351
>gi|206597507 HIV-1 Rev binding protein isoform 3 [Homo sapiens]
Length = 560
Score = 52.4 bits (124), Expect = 6e-07
Identities = 79/307 (25%), Positives = 122/307 (39%), Gaps = 39/307 (12%)
Query: 74 STNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDP------WA 127
S+ +N G P A S P + G+ AAS++ A + PK+S +
Sbjct: 249 SSGSSNFGGFPTASHSPFQPQTTGGS--AASVNA----NFAHFDNFPKSSSADFGTFNTS 302
Query: 128 ASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAE 187
S Q AS+ K +++ G + K +++ +FS G D S F T K
Sbjct: 303 QSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGG--DQGSGFGT--TGKAPVG 358
Query: 188 SVTSLPSQNNGTTSP-------DPFESQPLTVASSKPSSARKTPESF----LGPNAALVN 236
SV S+PSQ++ ++ D S T +++ S++ + F + +A
Sbjct: 359 SVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQP 418
Query: 237 LDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGP 296
S V P S NPF+A P+ ++ NPFQ N G+ + T FG
Sbjct: 419 ASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAAT--FGTASMSMPTGFGT 476
Query: 297 GPGVESMAVASMTSAAPQPALGA-------TGSSLTPLGPAMMNMVGSVGIPPSAAQATG 349
P S+ S + + QPA A T S P G A V P A G
Sbjct: 477 -PAPYSLP-TSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAAFGQTKPVVTPFGQVAAAG 534
Query: 350 -TTNPFL 355
++NPF+
Sbjct: 535 VSSNPFM 541
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 1e-06
Identities = 85/336 (25%), Positives = 125/336 (37%), Gaps = 42/336 (12%)
Query: 27 SRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSGPAAQKAEPW-GPSASTNQTNPWGGPA 85
+RRDT ++ +++ LP P+A+ P GP S + A
Sbjct: 151 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSS-------A 203
Query: 86 APASTSDPWPSFGTKPAASID-----PWGVPTGATVQSVPKNSDPWAASQQPASSAGKRA 140
+ ST++P P+ +P+A + + AT S P S P +A P + A
Sbjct: 204 SEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP-SARGTPRAPAHPSQ 262
Query: 141 SDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQN---N 197
G + P + KD L +S S ++ PS + +
Sbjct: 263 PKPKGLQALRPP-----------QVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPS 311
Query: 198 GTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRP--APPAQSLNPFL 255
T P P + P +S S + SFL P+ L L T P APPA +L P
Sbjct: 312 LQTLPSPPATPPSQATTSLGSPTLQATHSFL-PSPPL---SPLATPPPQAPPALALPPLQ 367
Query: 256 APGAPATSAPVNPFQVNQPQ---PLTLNQLRG----SPVLGTSTSFGPGPGVESMAVASM 308
AP +P S P++P PQ L ++ L+ P F P A+
Sbjct: 368 APPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATP 427
Query: 309 TSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSA 344
S AP P+L A + P PA M S PP A
Sbjct: 428 PSQAP-PSLAAPPLQVPPSPPASPPMSPSATPPPQA 462
Score = 40.4 bits (93), Expect = 0.002
Identities = 80/333 (24%), Positives = 117/333 (35%), Gaps = 34/333 (10%)
Query: 35 PKKKEHGSLPQQTTLLDLMDALPSSGPAAQKAEP-WGPSASTNQTNPWGGPAAPASTSDP 93
P+ H S P+ L L P P + A P GP +S+ P P+AP S S P
Sbjct: 254 PRAPAHPSQPKPKGLQALRP--PQVTPPRKDAAPALGPLSSSPLATP--SPSAPPSPSAP 309
Query: 94 WPSFGTKPAASIDPWGVPTGATVQSVPKNSDPWAASQ--QPASSAGKRASDAWGAVSTTK 151
PS T P+ P T + + + + S P ++ +A A
Sbjct: 310 -PSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQA 368
Query: 152 PVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPS-QNNGTTSPDPFESQPL 210
P S S L L T A + ++ Q + P P P
Sbjct: 369 PPSPPASPPL---------------SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPF 413
Query: 211 TVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQ 270
+ +S P S TP S P+ A L + PA P S + P AP A P Q
Sbjct: 414 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLA-APPLQ 472
Query: 271 VNQPQPLTLNQLRGSPVLGTSTSFGPGPG------VESMAVASMTSAAPQ--PALGATGS 322
+ +P P L P+ + PG S+ ++ + + PQ P L A
Sbjct: 473 LAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL 532
Query: 323 SLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFL 355
+ P PA + + PP+ T + P L
Sbjct: 533 QVPPSPPASPTL-QAPRRPPTPGPDTSVSGPRL 564
Score = 37.7 bits (86), Expect = 0.016
Identities = 73/302 (24%), Positives = 103/302 (34%), Gaps = 58/302 (19%)
Query: 98 GTKPAASIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSG 157
G KP A + G GAT+ + P S+ PAS G+RA A T P VS
Sbjct: 54 GRKPLA--ERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPA----KNTSPGPVSS 107
Query: 158 SFELFSNLNGTIKDDFSEFDNLRTSKKTAES---VTSLPSQN-------NGTTSPDPFES 207
+GT + LR S + + T P ++ T+ P P
Sbjct: 108 P----GRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTP 163
Query: 208 QPLTVASSKPS-----------SARKTPESFLGPNAALVNL-DSLVTRPAPPAQ------ 249
P S+ + SAR P + GP ++ + + T P+P A+
Sbjct: 164 SPAMARRSRAAGTEVGLPRPAPSARPRPPT-EGPRKSVSSASEHSTTEPSPAARRRPSAG 222
Query: 250 -------------SLNPFLAP---GAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTS 293
S P +P G A P P +QP+P L LR V
Sbjct: 223 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKD 282
Query: 294 FGP--GPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTT 351
P GP S SA P P+ + +L P PA + + QAT +
Sbjct: 283 AAPALGPLSSSPLATPSPSAPPSPSAPPSLQTL-PSPPATPPSQATTSLGSPTLQATHSF 341
Query: 352 NP 353
P
Sbjct: 342 LP 343
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 50.1 bits (118), Expect = 3e-06
Identities = 70/278 (25%), Positives = 110/278 (39%), Gaps = 69/278 (24%)
Query: 26 ESRRDTVKIPKKKEHGSLPQQTTLLDLMDALPSSGPAAQKAEPWGPS--------ASTNQ 77
ES + T+ PK ++ P+ TL + P S A EPWGPS S
Sbjct: 216 ESVKATLSNPKPQKQSHFPE--TLGPPSASSPESPVLAASPEPWGPSPAASPESRKSART 273
Query: 78 TNPWGGPAAPASTSDPWPSFGTKPAASIDPW----GVPTGATVQSVPKNSDPWAASQQPA 133
T+P +P+ + +PW F PA S +P V G+ P + PW ++ P+
Sbjct: 274 TSPEPRKPSPSESPEPWKPF---PAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSN--PS 328
Query: 134 SSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLP 193
+S+G W KP K A SV+ P
Sbjct: 329 ASSG-----PW------KPA------------------------------KPAPSVSPGP 347
Query: 194 SQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNP 253
+ + SP P++ P +V+S+ S+ +P S+ P A+ + S P + P
Sbjct: 348 WKPIPSVSPGPWKPTP-SVSSASWKSSSVSPSSWKSPPASPESWKS----GPPELRKTAP 402
Query: 254 FLAPGAPATSAPVNPFQVNQPQPLTLNQLR---GSPVL 288
L+P PV+P ++ +P P ++R GSP L
Sbjct: 403 TLSPEHWKAVPPVSP-ELRKPGPPLSPEIRSPAGSPEL 439
Score = 33.5 bits (75), Expect = 0.30
Identities = 65/302 (21%), Positives = 100/302 (33%), Gaps = 60/302 (19%)
Query: 44 PQQTTLLDLMDALPSS--GPAAQ----KAEPWGPSASTNQTNPWGGPAAPASTSDPWPSF 97
P+ T L L P S P Q EP P++ ++ P P + P PS
Sbjct: 146 PKPTPLTPLEPQKPGSVVSPELQTPLPSPEPSKPASVSSPEPPKSVPVCESQKLAPVPSP 205
Query: 98 GTKPAASIDPWGV------PTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTK 151
+ A + P V P P+ P +AS P S + + WG
Sbjct: 206 EPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASS-PESPVLAASPEPWGPSPAAS 264
Query: 152 PVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLT 211
P S+K+A + + P + + + SP+P++ P
Sbjct: 265 P----------------------------ESRKSARTTSPEPRKPSPSESPEPWKPFPAV 296
Query: 212 -------VASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSA 264
+ P S + P P + + S +PA PA S++P P P S
Sbjct: 297 SPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKPAKPAPSVSP--GPWKPIPSV 354
Query: 265 PVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSL 324
P+ +P P S S+S P A + P P L T +L
Sbjct: 355 SPGPW---KPTPSV------SSASWKSSSVSPSSWKSPPASPESWKSGP-PELRKTAPTL 404
Query: 325 TP 326
+P
Sbjct: 405 SP 406
Score = 33.1 bits (74), Expect = 0.39
Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 13/175 (7%)
Query: 186 AESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPA 245
++ + +PS +P ES T+++ KP PE+ P+A+ L P
Sbjct: 196 SQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPPSASSPESPVLAASPE 255
Query: 246 P--PAQSLNPFLAPGAPATS-APVNPFQVNQPQP------LTLNQLRGSPVLGTSTSFGP 296
P P+ + +P A TS P P P+P ++ R +P + S+ P
Sbjct: 256 PWGPSPAASPESRKSARTTSPEPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPG-SWKP 314
Query: 297 GPGVESMAVASMTSAAP---QPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQAT 348
GP S SA+ +PA A S P P G PS + A+
Sbjct: 315 GPPGSPRPWKSNPSASSGPWKPAKPAPSVSPGPWKPIPSVSPGPWKPTPSVSSAS 369
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.1 bits (118), Expect = 3e-06
Identities = 79/334 (23%), Positives = 106/334 (31%), Gaps = 65/334 (19%)
Query: 35 PKKKEHGSLPQQTTLLDLMDALPSSGPA--AQKAEPWGPSASTNQT-------NPWGGPA 85
PK+ P+Q L + + P A A K P PS T +P GGPA
Sbjct: 896 PKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPA 955
Query: 86 APASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWG 145
P+ P P T P+ P G PK + A+ P+ G G
Sbjct: 956 TPSPKWAPTPPAATPPS--------PKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKG 1007
Query: 146 AVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPF 205
A + P +V+ S K + + T P + + P
Sbjct: 1008 APT---PPAVT-----------------------PPSPKGSPAATPFPKGASTPPAATPP 1041
Query: 206 ESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAP 265
+ A+ P A TP + L SL P PPA + P G PAT +P
Sbjct: 1042 SPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAAT--PPSPKGGPATPSP 1099
Query: 266 VN---PFQVNQPQP---LTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGA 319
P P P L +G+P +T P G+ A P P
Sbjct: 1100 KGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGL----------ATPPPKGAP 1149
Query: 320 TGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNP 353
T + TP P G PP A T P
Sbjct: 1150 TTPAATPPSP----KGGLATPPPKGAPTTPAATP 1179
Score = 46.2 bits (108), Expect = 4e-05
Identities = 74/305 (24%), Positives = 103/305 (33%), Gaps = 60/305 (19%)
Query: 57 PSSGPAAQKAEPWGPSA-STNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGAT 115
P GPA + W P+ + +P GGPA P+ P P T P+ P G
Sbjct: 950 PKGGPATPSPK-WAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPS--------PKGGP 1000
Query: 116 VQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSE 175
PK + P + P S G A+ + ++T P + S
Sbjct: 1001 ATPSPKGA-PTPPAVTPPSPKGSPAATPFPKGASTPPAATPPS-----------PKGSPA 1048
Query: 176 FDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPS----SARKTPESFLGPN 231
L T + T LPS G +P + P A++ PS A +P+ P
Sbjct: 1049 ATPLPKGAPTTPAAT-LPSPKGGPATPS-LKGAPTPPAATPPSPKGGPATPSPKGAPMPP 1106
Query: 232 AALVNLDSLVTRPAPPAQSLNP--FLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLG 289
AA T P+P P AP PA + P + P P +G+P
Sbjct: 1107 AA--------TPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPP------KGAPTTP 1152
Query: 290 TSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIP-PSAAQAT 348
+T P G+ A P P T + TP P G + P P A T
Sbjct: 1153 AATPPSPKGGL----------ATPPPKGAPTTPAATPPSPK-----GGLATPSPKGAPTT 1197
Query: 349 GTTNP 353
P
Sbjct: 1198 PAATP 1202
Score = 43.9 bits (102), Expect = 2e-04
Identities = 69/302 (22%), Positives = 100/302 (33%), Gaps = 42/302 (13%)
Query: 59 SGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQS 118
SG +A + + + +P G +P + P P I P S
Sbjct: 775 SGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEAS 834
Query: 119 -VPKNSDPWAASQQ-PASSAGKRASDAWGAV--STTKPVSVSGSFELFSNLNGTIKDDFS 174
+P+NS + S+ PA++ GA S P+S G
Sbjct: 835 FLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGV---------------- 878
Query: 175 EFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAAL 234
L + SV +LP G +P P ++ L++ SS P AR TP +
Sbjct: 879 ---TLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAP-----KGI 930
Query: 235 VNLDSLVTRPAPPAQSLNPFLAPGAPATSAP---VNPFQVNQPQPLTLNQLRGSPVLGTS 291
S P PPA + P G PAT +P P P P +G P S
Sbjct: 931 PASPSPKGAPTPPAAT--PPSPKGGPATPSPKWAPTPPAATPPSP------KGGPAT-PS 981
Query: 292 TSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTT 351
P P + A P P T ++TP P+ + P A+ T
Sbjct: 982 PKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTP--PSPKGSPAATPFPKGASTPPAAT 1039
Query: 352 NP 353
P
Sbjct: 1040 PP 1041
Score = 43.5 bits (101), Expect = 3e-04
Identities = 76/307 (24%), Positives = 105/307 (34%), Gaps = 41/307 (13%)
Query: 57 PSSGPA--AQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGV--PT 112
P GPA + K P P+A+ +P GGPA P+ P P T P+ P P
Sbjct: 973 PKGGPATPSPKGAPTPPAATP--PSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPK 1030
Query: 113 GATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDD 172
GA S P + P + PA++ + + A + P + L
Sbjct: 1031 GA---STPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP 1087
Query: 173 FSEFDNLRT-SKKTA--ESVTSLPSQNNGTTSPDPFESQPLTVASSKPS--SARKTPESF 227
S T S K A + PS G +P P + P T A++ PS TP
Sbjct: 1088 PSPKGGPATPSPKGAPMPPAATPPSPKGGLATP-PHKGAPTTPAATPPSPKGGLATPP-- 1144
Query: 228 LGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPV 287
P A + P + P AP PA + P + P P +G+P
Sbjct: 1145 --PKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSP------KGAPT 1196
Query: 288 LGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIP-PSAAQ 346
+T P G+ A P P T + TP P G + P P A
Sbjct: 1197 TPAATPPSPKGGL----------ATPSPKGAPTTPAATPPSPK-----GGLATPSPKGAP 1241
Query: 347 ATGTTNP 353
T P
Sbjct: 1242 TTPAATP 1248
Score = 41.2 bits (95), Expect = 0.001
Identities = 94/365 (25%), Positives = 130/365 (35%), Gaps = 63/365 (17%)
Query: 52 LMDALPSSGPAAQKAEPWG--PSASTNQTNPWGGP--AAPASTSDP-WPSFGTKPAASID 106
L + LP PA+ P G SAS +T+ + GP A P S P+ P S D
Sbjct: 595 LGEPLPIGKPASSMTSPLGVNSSASVIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESAD 654
Query: 107 PWGV-PTGA----------------TVQSVPKNSD------------PWAASQQPASSAG 137
P GV PT A TV PKN P A+ P + +
Sbjct: 655 PAGVAPTTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSP 714
Query: 138 KR--ASDAWGAVSTTKPVSV-SGSFELFSNLNGTIKDD----FSEFDNLRTSKK---TAE 187
+ A A ++ P SV S S GT K D S + +S K T +
Sbjct: 715 QNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTED 774
Query: 188 SVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAP- 246
S S + + GT + PL V+ S + T + GP+ + NL S V+
Sbjct: 775 SGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEAS 834
Query: 247 --PAQSLNPFLAPGAPATS-APVNPFQVNQPQPLTLNQLRGS----PVLGTST------- 292
P SL+ + +PAT+ +P P P P + L P T T
Sbjct: 835 FLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP 894
Query: 293 --SFGPG-PGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNM-VGSVGIPPSAAQAT 348
GP P + SMTS++P+ A P P+ PPS
Sbjct: 895 FPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGP 954
Query: 349 GTTNP 353
T +P
Sbjct: 955 ATPSP 959
Score = 40.0 bits (92), Expect = 0.003
Identities = 76/295 (25%), Positives = 107/295 (36%), Gaps = 69/295 (23%)
Query: 87 PASTSDPWPSFGTKPAASIDPWGVPTG-------ATVQSVPKNSDPWAASQQPASSAGK- 138
P P S GT P +P + AT S P +S P ++ +P S A
Sbjct: 426 PLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMSSGP-ISNIEPTSPAALV 484
Query: 139 ----RASDAWGAVSTTKPVSVSGSF---ELFSNLNGTIKDDFSEFDNLRTSKKTAESVTS 191
+ V+TT + VS E NL ++ F +L+T + E
Sbjct: 485 MAPVAPKEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASLEGAPF 544
Query: 192 LPSQNNGTTSPDPFESQPLTVASSKPS----SARKTPESFLGPNAALVNLDSLVTRPAPP 247
P+Q TT DP PL A+ K S S +PE L P A L
Sbjct: 545 SPAQAGLTTKKDP-TVLPLVQAAPKNSPSFQSTSSSPEIPLSPEATLAK----------- 592
Query: 248 AQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGP---GPGVESMA 304
+SL L G PA+S +P VN + V+ T + GP GP ++S
Sbjct: 593 -KSLGEPLPIGKPASSM-TSPLGVNS----------SASVIKTDSYAGPDSAGPLLKSSL 640
Query: 305 VASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATG----TTNPFL 355
+ +A P L PA G+ P+ A+ T T +PFL
Sbjct: 641 ITPTVAAFP----------LESADPA--------GVAPTTAKGTSTYTTTASPFL 677
Score = 39.3 bits (90), Expect = 0.005
Identities = 78/321 (24%), Positives = 101/321 (31%), Gaps = 41/321 (12%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPT---- 112
P P A P P +P G P PA+T P P G A+ P G PT
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT-PPSPKGG---PATPPPKGAPTPPAA 1269
Query: 113 ------GATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVS--TTKPVSVSGSFELFSN 164
G K + A P+ G S GA + P S GS
Sbjct: 1270 TPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS------ 1323
Query: 165 LNGTIKDDFSEFDNLRT---SKKTAESVTSLPSQNNGTTSPDPFE--SQPLTVASSKPSS 219
GT + T K T + PS G T+P E + P S K
Sbjct: 1324 -PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGP 1382
Query: 220 ARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPAT---SAPVNPFQVNQP-- 274
A P GP D +P L+P AP P T +A + + P
Sbjct: 1383 AMTPPSPKRGPAIPSPKGDP----TSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAV 1438
Query: 275 QPLTLNQ--LRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSS--LTPLGPA 330
P++L + +P G +T G P P AT SS P PA
Sbjct: 1439 TPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPA 1498
Query: 331 MMNMVGSVGIPPSAAQATGTT 351
M + PS+ + T
Sbjct: 1499 PMGAPTLPAVIPSSPKEVPAT 1519
Score = 38.9 bits (89), Expect = 0.007
Identities = 69/319 (21%), Positives = 101/319 (31%), Gaps = 42/319 (13%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATV 116
P P A P P S P G P PA T T PA + G PT +
Sbjct: 1306 PKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 117 QSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEF 176
+ P PA++ + A S + ++ K D +
Sbjct: 1366 KEGP---------TPPAATPSHKGGPAMTPPSPKRGPAIPSP-----------KGDPTSP 1405
Query: 177 DNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTV---------ASSKPSSARKTPESF 227
+ S K A + P G +P + P V A+S P TP S
Sbjct: 1406 AVIPLSPKKAPAT---PVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSK 1462
Query: 228 LGPNAALVNLDSLVTRPAPP--AQSLNPFLAPGAPA-TSAPVNPFQV-NQPQPLTLN-QL 282
P V S PAP A S +P AP PA AP P + + P+ +
Sbjct: 1463 GDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSS 1522
Query: 283 RGSPVLGTSTSFGPGPGV-----ESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGS 337
R P+ T+T E++ +MT +P+ P P+
Sbjct: 1523 RRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSP 1582
Query: 338 VGIPPSAAQATGTTNPFLL 356
+ PS + + L+
Sbjct: 1583 PAVTPSTYKGAPSPKELLI 1601
Score = 31.6 bits (70), Expect = 1.1
Identities = 65/306 (21%), Positives = 99/306 (32%), Gaps = 47/306 (15%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATV 116
P P P P P G P +P T T PA+ G
Sbjct: 1610 PKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQAS 1669
Query: 117 QSVPKNSDPWAASQ---QPA-------SSAGKRASDAWGAVSTTKPVSVSGSFELFSNLN 166
+ +P P A + PA ++ ++ + +T+ P+ S + S
Sbjct: 1670 KGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGP 1729
Query: 167 GTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVAS-----SKPSSAR 221
+ + S KTA+ + S P+ S PLT A+ KP SA
Sbjct: 1730 LSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESAS 1789
Query: 222 KT--------------------PESFLGPNAALVNLDSLVTRPAPPA--QSLNPFLAPGA 259
+ P+ P++ + L+S ++P PA L P + P
Sbjct: 1790 VSAAPSPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLES-PSKPLAPADEDELLPLIPPEP 1848
Query: 260 PATSAPVNPFQVNQPQPLTLNQLRGSPVLGTS-----TSFGPGPGVESMAVASMTSAAPQ 314
+ P VN P P + G PV S T G G ES + S+ Q
Sbjct: 1849 ISGGVPFQSVLVNMPTP----KSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVPELEEQ 1904
Query: 315 PALGAT 320
+ AT
Sbjct: 1905 DSTQAT 1910
Score = 31.2 bits (69), Expect = 1.5
Identities = 56/225 (24%), Positives = 83/225 (36%), Gaps = 40/225 (17%)
Query: 106 DPWGVPTGATVQSVPKNSDPWAASQQ----PASSAGKRASDAWG--------AVSTTKPV 153
DP +P VQ+ PKNS + ++ P S A + G A S T P+
Sbjct: 556 DPTVLPL---VQAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMTSPL 612
Query: 154 SVSGSFELFSNLNGTIKDDFSEFDN---LRTSKKTAESVTSLPSQNNGTTSPDPFESQPL 210
V+ S + D ++ D+ L S +V + P + S DP P
Sbjct: 613 GVNSSASVIKT------DSYAGPDSAGPLLKSSLITPTVAAFPLE-----SADPAGVAPT 661
Query: 211 TVASSKPSSARKTP----ESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPV 266
T + + +P L P V +L T P P S N +AP T AP+
Sbjct: 662 TAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPL 721
Query: 267 NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSA 311
+ P ++ SP L + G PG + + S TSA
Sbjct: 722 ATLVLAPEIPKSV----PSPSLPPA---GTPPGTKKVDGISHTSA 759
Score = 29.6 bits (65), Expect = 4.3
Identities = 76/331 (22%), Positives = 113/331 (34%), Gaps = 34/331 (10%)
Query: 31 TVKIPKKKEHGSLPQ-QTTLLDLMDAL----------PSSGPAAQKAEPWGPSASTNQTN 79
T +P ++ PQ +T +L + AL P+ P A P ++ NQ +
Sbjct: 6 TETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQAS 65
Query: 80 PWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKR 139
P+ P+ AST P F + + P G A +P P P S A
Sbjct: 66 PFPSPSTIASTPLEVP-FPQSSSGTALPLGTAPEAPT-FLPNLIGP------PISPAALA 117
Query: 140 ASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGT 199
+ A + S S L + +++ + NL TS SV S + T
Sbjct: 118 LASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTS---PPSVAVAESGSVIT 174
Query: 200 TSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGA 259
S S+P T + PS P+ P + + P QS L
Sbjct: 175 LSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPPCIVSTVPYHCVTPMASIQSGVASLPQTT 234
Query: 260 PATSAPVNPFQVN---------QPQPLTLNQLRG--SPVLGTSTSFGPGPGVESMAVASM 308
P T+ + QV PQ L+G SP S S P V S +
Sbjct: 235 PTTTLAIASPQVKDTTISSVLISPQNPGSLSLKGPVSPPAALSLSTQSLPVVTSSQKTAG 294
Query: 309 TSAAPQPALGATGSSLTPLGPAMMNMVGSVG 339
+ P + + GS L PL + V +G
Sbjct: 295 PNTPPDFPI-SLGSHLAPLHQSSFGSVQLLG 324
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 48.9 bits (115), Expect = 7e-06
Identities = 65/290 (22%), Positives = 103/290 (35%), Gaps = 53/290 (18%)
Query: 72 SASTNQTNPWGGP-----AAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDPW 126
S TN T P P A P TS P SFG+ + + AT S+P
Sbjct: 1443 SQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGS----------LLSSATTPSLPM----- 1487
Query: 127 AASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTA 186
SAG+ +A + KP G E+ ++ +++ S
Sbjct: 1488 --------SAGRSTEEATSSALPEKP----GDSEVSASAASLLEEQQSA----------- 1524
Query: 187 ESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAP 246
+ P Q + + +P +QP S +S+ A + T P
Sbjct: 1525 -QLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVP 1583
Query: 247 PAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSF-GPGPGVESMAV 305
PA S F PG A +A ++ P+ + + +P+ ++TS PGP E+ A
Sbjct: 1584 PASS---FSVPGQTAVTAAA----ISSAGPVAV-ETSSTPIASSTTSIVAPGPSAEAAAF 1635
Query: 306 ASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNPFL 355
++TS + A SS + N + P Q +T P L
Sbjct: 1636 GTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAPSL 1685
Score = 35.4 bits (80), Expect = 0.079
Identities = 59/254 (23%), Positives = 90/254 (35%), Gaps = 56/254 (22%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATV 116
P+S A QK + +A+ + P PAAP +T P+ G S + + ATV
Sbjct: 438 PTSSQAPQKLD--ASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATV 495
Query: 117 QSVP----KNSDPWAASQQPASSA------GKRASDAWGAVSTTKPVSVSGSF------- 159
P SD A+ P S K + A S P + S SF
Sbjct: 496 TGEPPSYSSGSDSSKAAPGPGPSTFSFVPPSKASLAPTPAASPVAPSAASFSFGSSGFKP 555
Query: 160 ------------------ELFSNLNGTIKDDFSE-FDNLRTSKKTAESVT---------- 190
F +K + SE F TS + S +
Sbjct: 556 TLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSA 615
Query: 191 SLPSQNNGTTSPDPFESQPLTV---ASSKPSSARKTPESFLGPNAALVNLDSLVTRPA-- 245
S P+ + + P P + P +V +S PS + ++ + P ++V +T PA
Sbjct: 616 SKPAASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAK 675
Query: 246 ---PPAQSLNPFLA 256
P A+SL P +A
Sbjct: 676 PGSPQAKSLQPAVA 689
Score = 31.2 bits (69), Expect = 1.5
Identities = 62/269 (23%), Positives = 99/269 (36%), Gaps = 46/269 (17%)
Query: 115 TVQSVPKNSDPWAASQQPASSAGKR---ASDAWGAVSTTKPVSVSGS-------FELFSN 164
T++S K+ A P A R A V +T P S+S S +E
Sbjct: 924 TIESHTKSLPKVPAKLSPMKQAQLRNFLAKRKTPPVRSTAPASLSRSAFLSQRYYEDLDE 983
Query: 165 LNGTIKDDFS-EFDNLRTSKKTAESVTSLPSQNNGTTSPD----------PFE------- 206
++ T S E ++ RTS K E+V P +P PF
Sbjct: 984 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKSHLVHG 1043
Query: 207 SQPLTVASSKPSSARKT-PESFLGPNAALVNLDSLVTRPAPP--------AQSLNPFLAP 257
S P + +S +SA K P+ A + P+ P A +L +A
Sbjct: 1044 SSPGVMGTSVATSASKIIPQGADSTMLATKTVKHGAPSPSHPISAPQAAAAAALRRQMAS 1103
Query: 258 GAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPAL 317
APA + N PQ + + +L+ +P ST+ G +V T+ P P L
Sbjct: 1104 QAPAVNTLTESTLKNVPQVVNVQELKNNPAT-PSTAMG-------SSVPYSTAKTPHPVL 1155
Query: 318 GATGSSLTPLGPAMMNMVGSVGIPPSAAQ 346
++ G +++N + G P++ Q
Sbjct: 1156 TPVAANQAKQG-SLINSLKPSGPTPASGQ 1183
>gi|206597505 HIV-1 Rev binding protein isoform 1 [Homo sapiens]
Length = 584
Score = 48.9 bits (115), Expect = 7e-06
Identities = 64/246 (26%), Positives = 98/246 (39%), Gaps = 27/246 (10%)
Query: 129 SQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAES 188
S Q AS+ K +++ G + K +++ +FS G D S F T K S
Sbjct: 328 SHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGG--DQGSGFGT--TGKAPVGS 383
Query: 189 VTSLPSQNNGTTSP-------DPFESQPLTVASSKPSSARKTPESF----LGPNAALVNL 237
V S+PSQ++ ++ D S T +++ S++ + F + +A
Sbjct: 384 VVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPA 443
Query: 238 DSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPG 297
S V P S NPF+A P+ ++ NPFQ N G+ + T FG
Sbjct: 444 SSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAAT--FGTASMSMPTGFGT- 500
Query: 298 PGVESMAVASMTSAAPQPALGA-------TGSSLTPLGPAMMNMVGSVGIPPSAAQATG- 349
P S+ S + + QPA A T S P G A V P A G
Sbjct: 501 PAPYSLP-TSFSGSFQQPAFPAQAAFPQQTAFSQQPNGFAAFGQTKPVVTPFGQVAAAGV 559
Query: 350 TTNPFL 355
++NPF+
Sbjct: 560 SSNPFM 565
>gi|38570132 HIV-1 Rev binding protein isoform 2 [Homo sapiens]
Length = 562
Score = 48.9 bits (115), Expect = 7e-06
Identities = 81/326 (24%), Positives = 123/326 (37%), Gaps = 56/326 (17%)
Query: 74 STNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDP------WA 127
S+ +N G P A S P + G+ AAS++ A + PK+S +
Sbjct: 249 SSGSSNFGGFPTASHSPFQPQTTGGS--AASVNA----NFAHFDNFPKSSSADFGTFNTS 302
Query: 128 ASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAE 187
S Q AS+ K +++ G + K +++ +FS G D S F T K
Sbjct: 303 QSHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGG--DQGSGFGT--TGKAPVG 358
Query: 188 SVTSLPSQNNGTTSP-------DPFESQPLTVASSKPSSARKTPESF----LGPNAALVN 236
SV S+PSQ++ ++ D S T +++ S++ + F + +A
Sbjct: 359 SVVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQP 418
Query: 237 LDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFG- 295
S V P S NPF+A P+ ++ NPFQ N G+ + T FG
Sbjct: 419 ASSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAAT--FGTASMSMPTGFGT 476
Query: 296 PGP---------------GVESMAVASMTSAAPQP------ALGATGSSLTPLGPAMMNM 334
P P A T+ + QP A G T +TP G
Sbjct: 477 PAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAG 536
Query: 335 VGS----VGIPPSA-AQATGTTNPFL 355
V S G P + +TNPFL
Sbjct: 537 VSSNPFMTGAPTGQFPTGSSSTNPFL 562
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 48.5 bits (114), Expect = 9e-06
Identities = 55/287 (19%), Positives = 97/287 (33%), Gaps = 22/287 (7%)
Query: 44 PQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA 103
P T + P+ P + P ++T P P T P + T
Sbjct: 1518 PTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTP---TPTPTGTQTPTTTPITT-TT 1573
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFS 163
++ P PTG + + + P ++ K +T P++ + +
Sbjct: 1574 TVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKS--------TTVTPITTTTTVTATP 1625
Query: 164 NLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQ-PLT-VASSKPSSAR 221
GT T +VT P+ G+T P S P+ + +S P
Sbjct: 1626 TPTGTQTPTMIPIS-------TTTTVTPTPTPTTGSTGPPTHTSTAPIAELTTSNPPPES 1678
Query: 222 KTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQ 281
TP++ ++ L +L++ PPA + P P + P P T
Sbjct: 1679 STPQTSRSTSSPLTESTTLLST-LPPAIEMTSTAPPSTPTAPTTTSGGHTLSPPPSTTTS 1737
Query: 282 LRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLG 328
G+P GT+T P ++ + ++ P P +T S + G
Sbjct: 1738 PPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTG 1784
Score = 42.0 bits (97), Expect = 8e-04
Identities = 57/284 (20%), Positives = 98/284 (34%), Gaps = 22/284 (7%)
Query: 71 PSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSD-PWAAS 129
P+ + QT P P +T P P+ + P T T P + P +
Sbjct: 1395 PTPTGTQT-PTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPTPTA 1453
Query: 130 QQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESV 189
S+ + TT P++ + + GT T+ T +V
Sbjct: 1454 ITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPT-------PTAITTTTTV 1506
Query: 190 TSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQ 249
T P+ GT +P S P+T ++ + TP P ++ + VT P
Sbjct: 1507 TPTPTPT-GTQTPT---STPITTTTTVTPTP--TPTGTQTPTPTPISTTTTVTPTPTPTG 1560
Query: 250 SLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMT 309
+ P P T+ P P T+ ++ T+T+ P P S ++T
Sbjct: 1561 TQTPTTTPITTTTTVTPTPTPTGTQTPTTV-------LITTTTTMTPTPTPTSTKSTTVT 1613
Query: 310 SAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSAAQATGTTNP 353
+ AT + P M+ + + + P+ TG+T P
Sbjct: 1614 PITTTTTVTATPTPTGTQTPTMIPISTTTTVTPTPTPTTGSTGP 1657
Score = 40.8 bits (94), Expect = 0.002
Identities = 59/324 (18%), Positives = 106/324 (32%), Gaps = 27/324 (8%)
Query: 44 PQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAA 103
P T + P+ P + P +T P P T P P+ T +
Sbjct: 1403 PTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP---TPTPTGTQAPTPTAITT-TS 1458
Query: 104 SIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFS 163
++ P PTG + + + P + + + A++TT V+ + +
Sbjct: 1459 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTPT--AITTTTTVTPTPT----- 1511
Query: 164 NLNGTIKDDFSEFDNLRTSKKT-----AESVTSLPSQNNGTTSPDPFESQPLT-----VA 213
GT + T T ++ T P T +P P + T +
Sbjct: 1512 -PTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPIT 1570
Query: 214 SSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQ 273
++ + TP P L+ + +T P + + + P T+ P
Sbjct: 1571 TTTTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGT 1630
Query: 274 PQPLTLNQLRGSPVLGTST----SFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGP 329
P + + V T T S GP + +A +T++ P P +S + P
Sbjct: 1631 QTPTMIPISTTTTVTPTPTPTTGSTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSP 1690
Query: 330 AMMNMVGSVGIPPSAAQATGTTNP 353
+ +PP A + T T P
Sbjct: 1691 LTESTTLLSTLPP-AIEMTSTAPP 1713
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 47.8 bits (112), Expect = 2e-05
Identities = 92/384 (23%), Positives = 138/384 (35%), Gaps = 75/384 (19%)
Query: 8 QEERLRRGDDLRL--QMALEESRRDTVK-IPKKKE--HGSLPQQTTLLDLMDAL------ 56
Q++ L R L+ + L SR D+++ IPKK +G + ++ + L +L
Sbjct: 655 QDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPG 714
Query: 57 -----PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAAS------- 104
PS P + EPW P + + T G A+T + + G P+ S
Sbjct: 715 KSGSSPSQSPCSDLEEPWLPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKS 774
Query: 105 --IDPWGV-------------PTG--ATVQSVPKNSDPWAASQQPASSAGKRASDAWGAV 147
DPWG P G +T VP + P Q+ G RA+
Sbjct: 775 EYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGPVRHVQE-----GSRATMPQVPG 829
Query: 148 STTKP--VSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDP- 204
+ KP +S S + S +G +S N T+ S NG P P
Sbjct: 830 GSVKPKIMSPEKSHRVISPSSG-----YSSQSNTPTALTPVPVFLKSVSPANGKGKPKPK 884
Query: 205 ---FESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPA 261
+S ++ S SS + + + + LD V P P P PA
Sbjct: 885 VPERKSSLISSVSISSSSTSLSSSTSTEGSGTMKKLDPAVGSPPAPPPPPVPSPPFPCPA 944
Query: 262 TSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTS---AAPQPALG 318
+P P P P + +GSP L S F P P + S + P+PAL
Sbjct: 945 DRSPFLP-----PPPPVTDCSQGSP-LPHSPVFPPPPPEALIPFCSPPDWCLSPPRPAL- 997
Query: 319 ATGSSLTPLGPAMMNMVGSVGIPP 342
S + P P S+ +PP
Sbjct: 998 ---SPILPDSPV------SLPLPP 1012
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 47.8 bits (112), Expect = 2e-05
Identities = 69/326 (21%), Positives = 123/326 (37%), Gaps = 49/326 (15%)
Query: 40 HGSLPQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGT 99
+G P TL + +A + A E GP + WG P+ + P P+ G
Sbjct: 439 NGHAPYSRTLSHISEASVDAALAEASVEAVGPESLA-----WG----PSPPTHPAPTHGE 489
Query: 100 KPAA---SIDPWGVPTGATVQ---SVPKNSDPWAASQQ----------PASSAGKR---A 140
P+ ++DP T +T+ SVP ++DP ++ P+ G
Sbjct: 490 HPSPVPPALDPGHSATSSTLGTTGSVPTSTDPAPSAHLDSVHKSTDSGPSELPGPTHTTT 549
Query: 141 SDAWGAVSTT----KPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQN 196
+ A++TT P++ + + + T+ + + + T ++PS
Sbjct: 550 GSTYSAITTTHSAPSPLTHTTTGSTHKPIISTLTTTGPTLNIIGPVQTTTSPTHTMPSPT 609
Query: 197 NGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQS-----L 251
+ T SP + P +S +P + P + + L T P P S
Sbjct: 610 HTTASPTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTT 669
Query: 252 NPFLAPGAPATSAPV----NPFQVNQPQPLTLNQLRGSPVLGTSTSFG-------PGPGV 300
+P L +P+TS + +P + + P + L SP + S + P P
Sbjct: 670 SPILINVSPSTSLELATLSSPSKHSDPTLPGTDSLPCSPPVSNSYTQADPMAPRTPHPSP 729
Query: 301 ESMAVASMTSAAPQPALGATGSSLTP 326
+ +TS AP P+ +T SL+P
Sbjct: 730 AHSSRKPLTSPAPDPS-ESTVQSLSP 754
>gi|91984781 ArfGAP with FG repeats 2 [Homo sapiens]
Length = 481
Score = 47.8 bits (112), Expect = 2e-05
Identities = 79/307 (25%), Positives = 106/307 (34%), Gaps = 68/307 (22%)
Query: 92 DPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTK 151
DP PS + S P QS + S + P SS K ++D +
Sbjct: 181 DPAPSLSVAASTSSQP-------VSQSHARTSQARSTQPPPHSSVKKASTDLLADIGGDP 233
Query: 152 PVS--VSGSFELFSNLNGTIKDD--FSEFDNLRTSKKTAESVTSLPSQNN---------- 197
+ ++ +F F G F+ FD +S ++ SLP
Sbjct: 234 FAAPQMAPAFAAFPAFGGQTPSQGGFANFDAF-SSGPSSSVFGSLPPAGQASFQAQPTPA 292
Query: 198 GTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPA---PPAQSL--- 251
G++ PF + PL AS S A SFLGP + S + A PP QS+
Sbjct: 293 GSSQGTPFGATPLAPASQPNSLA--DVGSFLGPGVPAAGVPSSLFGMAGQVPPLQSVTMG 350
Query: 252 ---------------NPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGP 296
NPF AP A + NPFQ N P P G S S GP
Sbjct: 351 GGGGSSTGLAFGAFTNPFTAPAAQSPLPSTNPFQPNGLAP--------GPGFGMS-SAGP 401
Query: 297 GPGVESMAVASMTSAAPQPAL--------GATGSSLTPLGPAMMNMVGSVGIPPSAAQAT 348
G + S+ P P GSS LG A +G P + A
Sbjct: 402 GFPQAVPPTGAFASSFPAPLFPPQTPLVQQQNGSSFGDLGSA------KLGQRPLSQPAG 455
Query: 349 GTTNPFL 355
+TNPF+
Sbjct: 456 ISTNPFM 462
>gi|7662228 synaptosomal-associated protein, 91kDa homolog [Homo
sapiens]
Length = 907
Score = 47.4 bits (111), Expect = 2e-05
Identities = 78/335 (23%), Positives = 129/335 (38%), Gaps = 51/335 (15%)
Query: 51 DLMDALPSSGPAAQK--AEPWGPSASTNQTNPWGG--PAAP----ASTSDPWPSFGTKPA 102
D A P PAA + A P P+ + G P AP A + F KP
Sbjct: 442 DAFAASPGEAPAASEGAAAPATPTPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMKPP 501
Query: 103 ASIDPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELF 162
+ P PT +T VP A S PA +A A+ A A +TT + + +
Sbjct: 502 ETSVPVVTPTASTAPPVPAT----APSPAPAVAAAAAATTAATAAATTTTTTSAATATTA 557
Query: 163 SNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVAS------SK 216
D F + + K ++ S+ + S P + P+ +S S
Sbjct: 558 PPALDIFGDLFESTPEVAAAPKP-DAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSV 616
Query: 217 PSSARKTPESFLGP----NAALVNL-----DSLVTRPAPPAQSLNPFLAPG--------- 258
+ A +P + P ++ +++L S + P P +Q+ + A
Sbjct: 617 DAFAAPSPATTASPAKVDSSGVIDLFGDAFGSSASEPQPASQAASSSSASADLLAGFGGS 676
Query: 259 --APATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPG--PGVESMAVASMTSAA-- 312
AP+ S PV P Q N QP +P +S+SF P G+ + + +M A
Sbjct: 677 FMAPSPS-PVTPAQNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTMAPAGQP 735
Query: 313 -------PQPALGATGSSLTPLGPAMMNMVGSVGI 340
P PA+ A+ + + L ++ ++VG++GI
Sbjct: 736 APVSMVPPSPAMAASKALGSDLDSSLASLVGNLGI 770
Score = 43.9 bits (102), Expect = 2e-04
Identities = 73/316 (23%), Positives = 106/316 (33%), Gaps = 83/316 (26%)
Query: 56 LPSSGPAAQKAEPWGPSASTNQTNP------WGGPAAPASTSDP-------WPSFGT--- 99
L S PA P A T T+P A P STS P P F +
Sbjct: 302 LSKSSPATTVTSPNSTPAKTIDTSPPVDLFATASAAVPVSTSKPSSDLLDLQPDFSSGGA 361
Query: 100 ---------KPAASIDPWGVPTG----ATVQSVPKN---SDPWAASQQPASSAGKRASDA 143
PA WG G A + SVP SDP+A P ++ + A+ +
Sbjct: 362 AAAAAPAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPTPPTTTAEIATAS 421
Query: 144 WGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPD 203
A +TT +V+ +LF D F A S P+ + G +P
Sbjct: 422 ASASTTTTVTAVTAEVDLFG-------DAF------------AASPGEAPAASEGAAAP- 461
Query: 204 PFESQPLTVASSKPSSARKTP-ESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPAT 262
+ P VA++ + + P G A LD +P P T
Sbjct: 462 ---ATPTPVAAALDACSGNDPFAPSEGSAEAAPELDLFAMKP---------------PET 503
Query: 263 SAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGS 322
S PV +T PV T+ S P P V + A A+ + A T +
Sbjct: 504 SVPV----------VTPTASTAPPVPATAPS--PAPAVAAAAAATTAATAAATTTTTTSA 551
Query: 323 SLTPLGPAMMNMVGSV 338
+ P +++ G +
Sbjct: 552 ATATTAPPALDIFGDL 567
Score = 36.2 bits (82), Expect = 0.046
Identities = 65/316 (20%), Positives = 108/316 (34%), Gaps = 34/316 (10%)
Query: 55 ALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASID----PWGV 110
A P+ P A A WG + + A SDP+ T P + +
Sbjct: 365 AAPAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPTPPTTTAEIATASASA 424
Query: 111 PTGATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIK 170
T TV +V D + + A+S G+ + + GA + P V+ + + S
Sbjct: 425 STTTTVTAVTAEVDLFGDAF--AASPGEAPAASEGAAAPATPTPVAAALDACSG-----N 477
Query: 171 DDFSEFDNLRTSKKTAESVTSLPSQNN---GTTSPDPFESQPLTVASSKPSSARKTPESF 227
D F+ + + + P + + T + P T S P+ A +
Sbjct: 478 DPFAPSEGSAEAAPELDLFAMKPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATT 537
Query: 228 LGPNAA--LVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGS 285
AA + APPA + L P +A P + +
Sbjct: 538 AATAAATTTTTTSAATATTAPPALDIFGDLFESTPEVAAAPKPDAAPSIDLFSTDAFSSP 597
Query: 286 PVLGTSTSFGPGPGVESMAVASMTS----AAPQPALGATGSSLTPLGPAMMNMVG----- 336
P G P ES A + S AAP PA A+ + + G ++++ G
Sbjct: 598 PQ-------GASPVPESSLTADLLSVDAFAAPSPATTASPAKVDSSG--VIDLFGDAFGS 648
Query: 337 SVGIPPSAAQATGTTN 352
S P A+QA +++
Sbjct: 649 SASEPQPASQAASSSS 664
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 47.4 bits (111), Expect = 2e-05
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 57 PSSGPAAQKA--EPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGA 114
P+S AA EP P+A+ PAA T + P+F PA
Sbjct: 1104 PTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEE-PAFPA-PAVPTPEESASAAV 1161
Query: 115 TVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFS 174
V + +++ P AA PA SA A A + +P S + S + + T+++ S
Sbjct: 1162 AVPTPEESASPAAAVPTPAESASFAAVVA----TLEEPTSPAASVPTPAAMVATLEEFTS 1217
Query: 175 EFDNLRTSKKTAE--SVTSLPSQNNGTTSPDPFESQPLTVAS--------SKPSSARKTP 224
++ TS++ A + S P + + P +P + A+ S P+++ TP
Sbjct: 1218 PAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTP 1277
Query: 225 ESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAP 265
E P AA+ NL+ PA PA ++ PA S P
Sbjct: 1278 EEPASPAAAVSNLE----EPASPAAAVPTPEVAAIPAASVP 1314
Score = 37.7 bits (86), Expect = 0.016
Identities = 75/331 (22%), Positives = 117/331 (35%), Gaps = 39/331 (11%)
Query: 32 VKIPKKKEHGSLPQQTTLLDLMDALPSSGPAAQKA----EPWGPSASTNQTNPWGGPAAP 87
+ +P +E G+ T + A AA + EP P+A+ PAA
Sbjct: 960 ITVPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAA 1019
Query: 88 ASTSDPWPSFGTKPAASIDPWGVPT--GATVQSVPKNSDPWAASQQPASSAGKRASDAWG 145
P P T PAA++ P PT A V + + + P AA P + S A
Sbjct: 1020 V----PTPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPE----EPTSPAAA 1071
Query: 146 AVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPF 205
+ +P S + + T ++ S + T ++ ++P+ + P
Sbjct: 1072 VPTPEEPTSPAAAVP-------TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPAS---PA 1121
Query: 206 ESQPLTVASSKPSSARKTPESFLGPNAALVNLD---SLVTRPAPPAQSLNPFLAPGAPAT 262
+ P + P++A TPE P A+ + S P +S +P A PA
Sbjct: 1122 AAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAE 1181
Query: 263 SAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVE---SMAVASMTSAAPQPALGA 319
SA +P SP T +E S A + TS P A
Sbjct: 1182 SASFAAVVATLEEPT-------SPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAA 1234
Query: 320 TGSSLTPLGPAMMNMVGSVGIPPSAAQATGT 350
+ P PA V ++ P S+A A T
Sbjct: 1235 VSNPEEPTSPAA--AVPTLEEPTSSAAAVLT 1263
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 47.0 bits (110), Expect = 3e-05
Identities = 68/283 (24%), Positives = 101/283 (35%), Gaps = 21/283 (7%)
Query: 71 PSASTNQTNPWGGPAAPAST------SDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSD 124
P+ S NP P+ P T S P PS P AS P G T VQ+VP
Sbjct: 823 PTVSGLTKNPVSLPSLPNPTKPNNVPSVPSPSIQRNPTASAAPLG--TTLAVQAVPTAHS 880
Query: 125 PWAASQQPASSAGKRA----SDAWGAVSTTKPVSV---SGSFELFSNLNGTIKDDFSEFD 177
A++ + G S G + P+S S + E SN I++ ++
Sbjct: 881 IVQATRTSLPTVGPSGLYSPSTNRGPIQMKIPISAFSTSSAAEQNSNTTPRIENQTNKTI 940
Query: 178 NLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNL 237
+ SKK A+S SQ T D LT+ + S A + P+ + ++
Sbjct: 941 DASVSKKAADST----SQCGKATGSDSSGVIDLTM-DDEESGASQDPKKLNHTPVSTMSS 995
Query: 238 DSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPG 297
V+RP P Q P G P + + P T+N + PV +T
Sbjct: 996 SQPVSRPLQPIQPAPPLQPSGVPTSGPSQTTIHLLPTAPTTVN-VTHRPVTQVTTRLPVP 1054
Query: 298 PGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGI 340
+ V T AP G+ + +N SV +
Sbjct: 1055 RAPANHQVVYTTLPAPPAQAPLRGTVMQAPAVRQVNPQNSVTV 1097
>gi|206597509 HIV-1 Rev binding protein isoform 4 [Homo sapiens]
Length = 522
Score = 45.4 bits (106), Expect = 8e-05
Identities = 66/265 (24%), Positives = 99/265 (37%), Gaps = 44/265 (16%)
Query: 129 SQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAES 188
S Q AS+ K +++ G + K +++ +FS G D S F T K S
Sbjct: 264 SHQTASAVSKVSTNKAGLQTADKYAALANLDNIFSAGQGG--DQGSGFGT--TGKAPVGS 319
Query: 189 VTSLPSQNNGTTSP-------DPFESQPLTVASSKPSSARKTPESF----LGPNAALVNL 237
V S+PSQ++ ++ D S T +++ S++ + F + +A
Sbjct: 320 VVSVPSQSSASSDKYAALAELDSVFSSAATSSNAYTSTSNASSNVFGTVPVVASAQTQPA 379
Query: 238 DSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFG-P 296
S V P S NPF+A P+ ++ NPFQ N G+ + T FG P
Sbjct: 380 SSSVPAPFGATPSTNPFVAAAGPSVASSTNPFQTNARGATAAT--FGTASMSMPTGFGTP 437
Query: 297 GP---------------GVESMAVASMTSAAPQP------ALGATGSSLTPLGPAMMNMV 335
P A T+ + QP A G T +TP G V
Sbjct: 438 APYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGQTKPVVTPFGQVAAAGV 497
Query: 336 GS----VGIPPSA-AQATGTTNPFL 355
S G P + +TNPFL
Sbjct: 498 SSNPFMTGAPTGQFPTGSSSTNPFL 522
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 44.7 bits (104), Expect = 1e-04
Identities = 74/306 (24%), Positives = 116/306 (37%), Gaps = 47/306 (15%)
Query: 61 PAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVP 120
P ++AEP + + P PAAPA P P++G T T++++
Sbjct: 126 PVEKEAEPMDAEPAGDTRAPRPPPAAPAP---PTPAYGAPS----------TNVTLEALL 172
Query: 121 KNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLR 180
A Q A +AG S A G V+ +V E L + +R
Sbjct: 173 STKVAVAQFSQGARAAG--GSGAGGGVAAA---AVPLILEQLMALQQQQIHQLQLIEQIR 227
Query: 181 TSKKTAESVTSLPSQNNGT--TSPDPFESQ-------PLTV---ASSKPSSARKTPESFL 228
+ + PS + ++P P SQ PL+ A++ S P +F
Sbjct: 228 SQVALMQRPPPRPSLSPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFE 287
Query: 229 GPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGS--- 285
G L +S + P PA+ P APA +AP PQ +Q + +
Sbjct: 288 GAQP-LSRPESGASTPGGPAEPSAPAAPSAAPAPAAPA---PAPAPQSAASSQPQSASTP 343
Query: 286 PVLGTSTSFGPGPGVESMAVASMTSAA------PQPALGATGSSLTPLGPAMMNMVGSVG 339
P L + G PG+ S + TSA+ P ++ AT ++L PL M + G
Sbjct: 344 PALAPGSLLGAAPGLPS-PLLPQTSASGVIFPNPLVSIAATANALDPLSALMKHRKGK-- 400
Query: 340 IPPSAA 345
PP+ +
Sbjct: 401 -PPNVS 405
Score = 30.4 bits (67), Expect = 2.5
Identities = 43/185 (23%), Positives = 65/185 (35%), Gaps = 21/185 (11%)
Query: 180 RTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDS 239
R +K AE + + P+ + P P P T A PS+ T E+ L A+ S
Sbjct: 125 RPVEKEAEPMDAEPAGDTRAPRPPPAAPAPPTPAYGAPST-NVTLEALLSTKVAVAQF-S 182
Query: 240 LVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTL-NQLRGSPVL---------- 288
R A + + A P + Q Q L L Q+R L
Sbjct: 183 QGARAAGGSGAGGGVAAAAVPLILEQLMALQQQQIHQLQLIEQIRSQVALMQRPPPRPSL 242
Query: 289 ---GTSTSFGPGPG-VESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSVGIPPSA 344
++ GP P + +A +++ AP A+ +G P PA + P S
Sbjct: 243 SPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSG----PAAPAAFEGAQPLSRPESG 298
Query: 345 AQATG 349
A G
Sbjct: 299 ASTPG 303
Score = 30.0 bits (66), Expect = 3.3
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 23/110 (20%)
Query: 55 ALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGA 114
A P S P + + P GP+ P+APA+ PS PAA P A
Sbjct: 289 AQPLSRPESGASTPGGPAE----------PSAPAA-----PSAAPAPAA-------PAPA 326
Query: 115 TVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSN 164
+S P +AS PA + G A G S P S S +F N
Sbjct: 327 PAPQSAASSQPQSASTPPALAPGSLLGAAPGLPSPLLP-QTSASGVIFPN 375
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 3e-04
Identities = 60/253 (23%), Positives = 92/253 (36%), Gaps = 34/253 (13%)
Query: 120 PKNSDPWAASQQPASSAGKRASDAWGA-VSTTKPVSV---SGSFELFSNLNGTIKDD--- 172
P N + QP K +S V+TT+ SV S S ++ + N T
Sbjct: 78 PNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNAT 137
Query: 173 -FSEFDNLRTSKKTA----------ESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 221
S +N+ TS A + T+ P + TT P S P ++ P+ +
Sbjct: 138 TISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSA 197
Query: 222 KT---PESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLT 278
T P S P T PAPP+ S P T+AP P P PL+
Sbjct: 198 TTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPP------ETTAAPPTP-SATTPAPLS 250
Query: 279 LNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSV 338
S +T+ P P ++ +S ++ A T S+ TP P+ +
Sbjct: 251 ------SSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT 304
Query: 339 GIPPSAAQATGTT 351
P + ++ TT
Sbjct: 305 AAPITTPNSSPTT 317
Score = 37.7 bits (86), Expect = 0.016
Identities = 55/226 (24%), Positives = 82/226 (36%), Gaps = 40/226 (17%)
Query: 43 LPQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPA 102
LPQ T + + + +S A A P S + P P++T+ PS P
Sbjct: 132 LPQNATTISSRENVNTSSSVATLA----PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPE 187
Query: 103 ASIDPWGVPT-GATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFEL 161
+ P PT AT Q+ P +S P P ++A A +T P S S E
Sbjct: 188 TTAAP---PTPSATTQAPPSSSAP------PETTAAPPTPPA----TTPAPPSSSAPPET 234
Query: 162 FSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASS-KPSSA 220
T+ S T+ P+ + + P+ P A++ PSSA
Sbjct: 235 -------------------TAAPPTPSATT-PAPLSSSAPPETTAVPPTPSATTLDPSSA 274
Query: 221 RKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAP-GAPATSAP 265
PE+ P + + PAP + P P +P T AP
Sbjct: 275 SAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAP 320
Score = 34.3 bits (77), Expect = 0.18
Identities = 50/228 (21%), Positives = 79/228 (34%), Gaps = 17/228 (7%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDP---WPSFGTKPAASIDPWGVPTG 113
PS + P P ++ + P A+T P +PS TK + +P
Sbjct: 76 PSPNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQN 135
Query: 114 ATVQSVPKN--SDPWAASQQPASSAGKR---ASDAWGAVSTTKPVSVSGSFELFSNLNGT 168
AT S +N + A+ P +S + A+ + +T P S S E +
Sbjct: 136 ATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTA----- 190
Query: 169 IKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFL 228
S S T+ P TT P S P ++ P+ + TP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTP---- 246
Query: 229 GPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQP 276
P ++ ++ P P A +L+P A P T+A P P
Sbjct: 247 APLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAP 294
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 3e-04
Identities = 60/253 (23%), Positives = 92/253 (36%), Gaps = 34/253 (13%)
Query: 120 PKNSDPWAASQQPASSAGKRASDAWGA-VSTTKPVSV---SGSFELFSNLNGTIKDD--- 172
P N + QP K +S V+TT+ SV S S ++ + N T
Sbjct: 78 PNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNAT 137
Query: 173 -FSEFDNLRTSKKTA----------ESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 221
S +N+ TS A + T+ P + TT P S P ++ P+ +
Sbjct: 138 TISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSA 197
Query: 222 KT---PESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLT 278
T P S P T PAPP+ S P T+AP P P PL+
Sbjct: 198 TTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPP------ETTAAPPTP-SATTPAPLS 250
Query: 279 LNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSV 338
S +T+ P P ++ +S ++ A T S+ TP P+ +
Sbjct: 251 ------SSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT 304
Query: 339 GIPPSAAQATGTT 351
P + ++ TT
Sbjct: 305 AAPITTPNSSPTT 317
Score = 37.7 bits (86), Expect = 0.016
Identities = 55/226 (24%), Positives = 82/226 (36%), Gaps = 40/226 (17%)
Query: 43 LPQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPA 102
LPQ T + + + +S A A P S + P P++T+ PS P
Sbjct: 132 LPQNATTISSRENVNTSSSVATLA----PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPE 187
Query: 103 ASIDPWGVPT-GATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFEL 161
+ P PT AT Q+ P +S P P ++A A +T P S S E
Sbjct: 188 TTAAP---PTPSATTQAPPSSSAP------PETTAAPPTPPA----TTPAPPSSSAPPET 234
Query: 162 FSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASS-KPSSA 220
T+ S T+ P+ + + P+ P A++ PSSA
Sbjct: 235 -------------------TAAPPTPSATT-PAPLSSSAPPETTAVPPTPSATTLDPSSA 274
Query: 221 RKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAP-GAPATSAP 265
PE+ P + + PAP + P P +P T AP
Sbjct: 275 SAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAP 320
Score = 34.3 bits (77), Expect = 0.18
Identities = 50/228 (21%), Positives = 79/228 (34%), Gaps = 17/228 (7%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDP---WPSFGTKPAASIDPWGVPTG 113
PS + P P ++ + P A+T P +PS TK + +P
Sbjct: 76 PSPNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQN 135
Query: 114 ATVQSVPKN--SDPWAASQQPASSAGKR---ASDAWGAVSTTKPVSVSGSFELFSNLNGT 168
AT S +N + A+ P +S + A+ + +T P S S E +
Sbjct: 136 ATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTA----- 190
Query: 169 IKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFL 228
S S T+ P TT P S P ++ P+ + TP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTP---- 246
Query: 229 GPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQP 276
P ++ ++ P P A +L+P A P T+A P P
Sbjct: 247 APLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAP 294
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 3e-04
Identities = 60/253 (23%), Positives = 92/253 (36%), Gaps = 34/253 (13%)
Query: 120 PKNSDPWAASQQPASSAGKRASDAWGA-VSTTKPVSV---SGSFELFSNLNGTIKDD--- 172
P N + QP K +S V+TT+ SV S S ++ + N T
Sbjct: 78 PNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNAT 137
Query: 173 -FSEFDNLRTSKKTA----------ESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 221
S +N+ TS A + T+ P + TT P S P ++ P+ +
Sbjct: 138 TISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSA 197
Query: 222 KT---PESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLT 278
T P S P T PAPP+ S P T+AP P P PL+
Sbjct: 198 TTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPP------ETTAAPPTP-SATTPAPLS 250
Query: 279 LNQLRGSPVLGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLTPLGPAMMNMVGSV 338
S +T+ P P ++ +S ++ A T S+ TP P+ +
Sbjct: 251 ------SSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETT 304
Query: 339 GIPPSAAQATGTT 351
P + ++ TT
Sbjct: 305 AAPITTPNSSPTT 317
Score = 37.7 bits (86), Expect = 0.016
Identities = 55/226 (24%), Positives = 82/226 (36%), Gaps = 40/226 (17%)
Query: 43 LPQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPA 102
LPQ T + + + +S A A P S + P P++T+ PS P
Sbjct: 132 LPQNATTISSRENVNTSSSVATLA----PVNSPAPQDTTAAPPTPSATTPAPPSSSAPPE 187
Query: 103 ASIDPWGVPT-GATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFEL 161
+ P PT AT Q+ P +S P P ++A A +T P S S E
Sbjct: 188 TTAAP---PTPSATTQAPPSSSAP------PETTAAPPTPPA----TTPAPPSSSAPPET 234
Query: 162 FSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASS-KPSSA 220
T+ S T+ P+ + + P+ P A++ PSSA
Sbjct: 235 -------------------TAAPPTPSATT-PAPLSSSAPPETTAVPPTPSATTLDPSSA 274
Query: 221 RKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAP-GAPATSAP 265
PE+ P + + PAP + P P +P T AP
Sbjct: 275 SAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAP 320
Score = 34.3 bits (77), Expect = 0.18
Identities = 50/228 (21%), Positives = 79/228 (34%), Gaps = 17/228 (7%)
Query: 57 PSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDP---WPSFGTKPAASIDPWGVPTG 113
PS + P P ++ + P A+T P +PS TK + +P
Sbjct: 76 PSPNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQN 135
Query: 114 ATVQSVPKN--SDPWAASQQPASSAGKR---ASDAWGAVSTTKPVSVSGSFELFSNLNGT 168
AT S +N + A+ P +S + A+ + +T P S S E +
Sbjct: 136 ATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTA----- 190
Query: 169 IKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFL 228
S S T+ P TT P S P ++ P+ + TP
Sbjct: 191 APPTPSATTQAPPSSSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTP---- 246
Query: 229 GPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQP 276
P ++ ++ P P A +L+P A P T+A P P
Sbjct: 247 APLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAP 294
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 43.5 bits (101), Expect = 3e-04
Identities = 82/326 (25%), Positives = 111/326 (34%), Gaps = 62/326 (19%)
Query: 53 MDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDP-------WPSFGTKPAASI 105
+ A P+ GP Q P++ +P G P PAS P+ G+ P
Sbjct: 1032 LSAQPTPGPVPQVL----PASLMVSASPAGPPLIPASRPPGPVLLPPLQPNSGSLPQVLP 1087
Query: 106 DPWGVPTGATVQSVPKNSDPWAASQQPASSAGKRASDAW--GAVSTTKPVSVSGSFELFS 163
P GV +G + P S +P A R S A G+ S KP++V +
Sbjct: 1088 SPLGVLSGTSRPPTP------TLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYT--- 1138
Query: 164 NLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKT 223
F TS TA + T T P P + + S P +
Sbjct: 1139 ---------FPPAAATTTSTTTATATT--------TAVPAPTPAPQRLILS--PDMQARL 1179
Query: 224 PESFLGPNAALVNLDSLVTRPAPPAQSLNP--FLAPG--APATSAPVNPFQVNQPQPLTL 279
P G ++ L SL RP A P F G T A V V QP+PL
Sbjct: 1180 PS---GEVVSIGQLASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQR 1236
Query: 280 N-----------QLRGSPV---LGTSTSFGPGPGVESMAVASMTSAAPQPALGATGSSLT 325
N L P L + + PGP S+ +S S P P + +
Sbjct: 1237 NVVHLVSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAAN 1296
Query: 326 PLGPAMMNMVGSVGIPPSAAQATGTT 351
+ P M+N G V I A G T
Sbjct: 1297 QVPPTMVNNTGVVKIVVRQAPRDGLT 1322
Score = 42.7 bits (99), Expect = 5e-04
Identities = 64/263 (24%), Positives = 96/263 (36%), Gaps = 37/263 (14%)
Query: 71 PSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTGATVQSVPKNSDPWAASQ 130
PS S++QT G P A TS P + A + P VP A P +P A
Sbjct: 1513 PSLSSSQTP--GHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQA 1570
Query: 131 Q---PASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAE 187
PASSA + + ++ + ++ S L +
Sbjct: 1571 SLLAPASSASQALATPLAPMAAPQTAILAPS-------------PAPPLAPLPVLAPSPG 1617
Query: 188 SVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAP- 246
+ L S P + ++AS+ P A P L P++ L + V P P
Sbjct: 1618 AAPVLASSQTPVPVMAPSSTPGTSLASASPVPA---PTPVLAPSSTQTMLPAPVPSPLPS 1674
Query: 247 PAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVA 306
PA + LAP T +P Q TL+ LGT GP P +++++
Sbjct: 1675 PASTQTLALAPALAPTLGGSSPSQ-------TLS-------LGTGNPQGPFP-TQTLSLT 1719
Query: 307 SMTSAAPQPALGATGSSLTPLGP 329
+S P PA + + PLGP
Sbjct: 1720 PASSLVPTPAQTLSLAPGPPLGP 1742
Score = 39.7 bits (91), Expect = 0.004
Identities = 73/326 (22%), Positives = 116/326 (35%), Gaps = 32/326 (9%)
Query: 52 LMDALPSS-GPAAQKAEPWGPSASTNQT-----NPWGGPAAPASTSDPWPSFGTKPAASI 105
L PS+ PA +A P++S +Q P P P P P +
Sbjct: 1555 LASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAP 1614
Query: 106 DPWGVPTGATVQS-VPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSN 164
P P A+ Q+ VP + P+S+ G + A + T ++ S + +
Sbjct: 1615 SPGAAPVLASSQTPVPVMA--------PSSTPGTSLASASPVPAPTPVLAPSSTQTMLPA 1666
Query: 165 LNGTIKDDFSEFDNLRTSKKTAESVT-SLPSQ--NNGTTSPD-PFESQPLTVASSKPSSA 220
+ + L + A ++ S PSQ + GT +P PF +Q L++ +
Sbjct: 1667 PVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVP 1726
Query: 221 RKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPF-LAPGAPATSAPVN-------PFQVN 272
L P L +L PAPP +P AP T AP + P V
Sbjct: 1727 TPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
Query: 273 ----QPQPLTLNQLRGSPVLGTSTSFGPGPGVE-SMAVASMTSAAPQPALGATGSSLTPL 327
P P+ + L + + P + S V S + AAP P + ++
Sbjct: 1787 TLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKD 1846
Query: 328 GPAMMNMVGSVGIPPSAAQATGTTNP 353
P + + PPS A + G P
Sbjct: 1847 EPDTLTLRSGPPSPPSTATSFGGPRP 1872
Score = 38.5 bits (88), Expect = 0.009
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 19/205 (9%)
Query: 152 PVSVSGSFELFSNLNGTIKDDFSEFDNLRTSKKTAESVTSLPSQNN-----GTTSPDPFE 206
P+++S + S+L G N S S+P ++ TT P P
Sbjct: 1394 PLTISSPLHVPSSLPGPASSPMP-IPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAP-A 1451
Query: 207 SQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPV 266
S PLT+ S P + S GP AL+ + P PA P LAP + SA
Sbjct: 1452 SAPLTIPISAPLTV-----SASGP--ALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASA 1504
Query: 267 NPFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVES-MAVASMTSAAPQPALGATGSSLT 325
+ L+ +Q G P+L TS PG+ S +A A P AL + S
Sbjct: 1505 LTLGLATAPSLSSSQTPGHPLLLAPTS-SHVPGLNSTVAPACSPVLVPASALASPFPSAP 1563
Query: 326 PLGPAMMNMVGSVGIPPSAAQATGT 350
PA +++ SA+QA T
Sbjct: 1564 NPAPAQASLLAPAS---SASQALAT 1585
Score = 35.8 bits (81), Expect = 0.060
Identities = 83/322 (25%), Positives = 113/322 (35%), Gaps = 95/322 (29%)
Query: 56 LPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPW--PSFGTKPAASIDPWGVPTG 113
+P S P A GP+ T+ T P P PA+ P PS G P+AS G+ T
Sbjct: 1457 IPISAPLTVSAS--GPALLTSVTPPLA-PVVPAAPGPPSLAPS-GASPSASALTLGLATA 1512
Query: 114 ATVQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDF 173
++ S SQ P P+ ++ + LN T+
Sbjct: 1513 PSLSS----------SQTPGH-----------------PLLLAPTSSHVPGLNSTVAPAC 1545
Query: 174 SEFDNLRTSKKTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAA 233
S L + A S P+ P P ++ L ASS S A TP L P AA
Sbjct: 1546 SPV--LVPASALASPFPSAPN-------PAPAQASLLAPASSA-SQALATP---LAPMAA 1592
Query: 234 LVNLDSLVTRPAPPAQSLNPFLAPGAPATSAPVNPFQVNQPQPLTLNQLRGSPVLGTSTS 293
P A AP+ + P+ P V P P +PVL +S +
Sbjct: 1593 -------------------PQTAILAPSPAPPLAPLPVLAPSP------GAAPVLASSQT 1627
Query: 294 FGPGPGVESMAVASMTSAAPQPA---------------------LGATGSSLT-PLGPAM 331
P S S+ SA+P PA L + S+ T L PA+
Sbjct: 1628 PVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLALAPAL 1687
Query: 332 MNMVGSVGIPPSAAQATGTTNP 353
+G G PS + GT NP
Sbjct: 1688 APTLG--GSSPSQTLSLGTGNP 1707
Score = 33.9 bits (76), Expect = 0.23
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 189 VTSLPSQNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPPA 248
V+ LPS TT P S P +A + P + + N +V + V R AP
Sbjct: 1272 VSVLPSSTPSTT--------PAPTGLSLPLAANQVPPTMVN-NTGVVKI---VVRQAP-R 1318
Query: 249 QSLNPFLAPGAPATSAPVN--PFQVNQPQPLTLNQLRGSPVLGTSTSFGPGPGVESMAVA 306
L P + P APA P + P +N LT +L +P LGT+ + P P + +
Sbjct: 1319 DGLTP-VPPLAPAPRPPSSGLPAVLNPRPTLTPGRLP-TPTLGTARAPMPTPTLVRPLLK 1376
Query: 307 SMTSAAPQPALGATGSS-LTPLGPAMMNMVGSVGIPPSAAQATGTTNP 353
+ S +P+ + A G++ LT P +++ S+ P S+ ++P
Sbjct: 1377 LVHSPSPEVSASAPGAAPLTISSP--LHVPSSLPGPASSPMPIPNSSP 1422
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 43.1 bits (100), Expect = 4e-04
Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 11/148 (7%)
Query: 1 MSREVAEQEERLRRGDDLRLQMALEES-------RRDTVKIPKKKEHGSLPQQTTLLDLM 53
+ E AEQ +R R + LR+ AL+E+ TV P Q +
Sbjct: 714 LMEESAEQAQR--RDEMLRMYHALKEALSIIGDINTTTVSTPMPPPVDDSWLQVQSVPAG 771
Query: 54 DALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPASTSDPWPSFGTKPAASIDPWGVPTG 113
P+S P Q+ P P A P GP S P ++P AS DP+G P
Sbjct: 772 RRSPTSSPTPQRRAPAVPPARPGSRGPAPGPPPAGSALGGAPPVPSRPGASPDPFGPP-- 829
Query: 114 ATVQSVPKNSDPWAASQQPASSAGKRAS 141
V S P + P S+ +S + S
Sbjct: 830 PQVPSRPNRAPPGVPSRSGQASPSRPES 857
Score = 30.8 bits (68), Expect = 1.9
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 18/101 (17%)
Query: 189 VTSLPS-QNNGTTSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAPP 247
V S+P+ + + T+SP P P V ++P S P GP A L P+ P
Sbjct: 765 VQSVPAGRRSPTSSPTPQRRAP-AVPPARPGSRGPAP----GPPPAGSALGGAPPVPSRP 819
Query: 248 AQSLNPF------------LAPGAPATSAPVNPFQVNQPQP 276
S +PF PG P+ S +P + P+P
Sbjct: 820 GASPDPFGPPPQVPSRPNRAPPGVPSRSGQASPSRPESPRP 860
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.123 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,021,519
Number of Sequences: 37866
Number of extensions: 946647
Number of successful extensions: 6301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 595
Number of HSP's that attempted gapping in prelim test: 4919
Number of HSP's gapped (non-prelim): 1613
length of query: 356
length of database: 18,247,518
effective HSP length: 103
effective length of query: 253
effective length of database: 14,347,320
effective search space: 3629871960
effective search space used: 3629871960
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.