AGFG1 12163

Name: AGFG1	Sequence: fasta or formatted (584aa)		NCBI GI: 206597505
Description: HIV-1 Rev binding protein isoform 1		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt prot [560aa] HIV-1 Rev binding protein isoform 3 alt prot [522aa] HIV-1 Rev binding protein isoform 4 alt prot [562aa] HIV-1 Rev binding protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.7 74 3 C cysteine 1.0 6 1 D aspartate 3.4 20 2 E glutamate 2.2 13 2 F phenylalanine 8.0 47 1 G glycine 7.5 44 2 H histidine 2.1 12 1 I isoleucine 1.2 7 1 K lysine 4.5 26 2 L leucine 4.5 26 2 M methionine 1.5 9 1 N asparagine 4.8 28 1 P proline 7.5 44 2 Q glutamine 6.8 40 3 R arginine 2.1 12 1 S serine 15.1 88 3 T threonine 8.0 47 2 V valine 5.5 32 2 W tryptophan 0.3 2 1 Y tyrosine 1.2 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 HIV-1 Rev binding protein isoform 1 AGFG1 0.945 HIV-1 Rev binding protein isoform 3 AGFG1 0.940 HIV-1 Rev binding protein isoform 2 AGFG1 0.697 HIV-1 Rev binding protein isoform 4 AGFG2 0.216 ArfGAP with FG repeats 2 NUP214 0.044 nucleoporin 214kDa SMAP1 0.041 stromal membrane-associated GTPase-activating prote... SMAP1 0.040 stromal membrane-associated GTPase-activating protei... SMAP2 0.037 small ArfGAP2 ADAP1 0.036 centaurin, alpha 1 MUC21 0.035 mucin 21 ARFGAP1 0.034 ADP-ribosylation factor GTPase activating protein 1 i... ARFGAP1 0.033 ADP-ribosylation factor GTPase activating protein 1 ... AGAP1 0.030 centaurin, gamma 2 isoform 2 AGAP1 0.030 centaurin, gamma 2 isoform 1 NUP153 0.029 nucleoporin 153kDa MUC5B 0.028 mucin 5, subtype B, tracheobronchial POM121C 0.027 POM121 membrane glycoprotein (rat)-like AGAP9 0.026 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... AGAP10 0.026 PREDICTED: ArfGAP with GTPase domain, ankyrin repea... AGAP7 0.026 ArfGAP with GTPase domain, ankyrin repeat and PH do... AGAP3 0.026 centaurin, gamma 3 isoform a AMOT 0.026 angiomotin isoform 2 AMOT 0.026 angiomotin isoform 1 AGAP11 0.026 ankyrin repeat and GTPase domain Arf GTPase activat... AGAP6 0.026 centaurin, gamma-like family, member 3 AGAP4 0.026 ArfGAP with GTPase domain, ankyrin repeat and PH do... ARFGAP3 0.025 ADP-ribosylation factor GTPase activating protein 3... AGAP8 0.025 ArfGAP with GTPase domain, ankyrin repeat and PH do... MUC4 0.024 mucin 4 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.