CCDC28B 639

Name: CCDC28B	Sequence: fasta or formatted (200aa)		NCBI GI: 110349769
Description: coiled-coil domain containing 28B		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 14 2 C cysteine 2.0 4 1 D aspartate 5.5 11 2 E glutamate 12.0 24 4 F phenylalanine 3.0 6 1 G glycine 8.0 16 3 H histidine 3.5 7 1 I isoleucine 0.5 1 1 K lysine 7.5 15 4 L leucine 13.0 26 2 M methionine 2.0 4 1 N asparagine 3.0 6 1 P proline 6.5 13 1 Q glutamine 5.5 11 1 R arginine 5.0 10 2 S serine 7.5 15 1 T threonine 3.5 7 1 V valine 4.5 9 1 W tryptophan 0.0 0 0 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 28B CCDC28A 0.388 coiled-coil domain containing 28A FAM124A 0.026 hypothetical protein LOC220108 RAD21 0.024 RAD21 homolog ZCCHC6 0.021 zinc finger, CCHC domain containing 6 CDR2 0.021 cerebellar degeneration-related protein 2 MDN1 0.021 MDN1, midasin homolog CAGE1 0.018 cancer antigen 1 DNTTIP2 0.018 deoxynucleotidyltransferase, terminal, interacting p... FAM114A2 0.018 hypothetical protein LOC10827 CDC2L2 0.018 cell division cycle 2-like 2 isoform 4 CDC2L2 0.018 cell division cycle 2-like 2 isoform 1 CDC2L1 0.018 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.018 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.018 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.018 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.018 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.018 cell division cycle 2-like 1 (PITSLRE proteins) isof... PUS7 0.018 pseudouridylate synthase 7 homolog CHMP2A 0.016 chromatin modifying protein 2A CHMP2A 0.016 chromatin modifying protein 2A ZFP36L2 0.016 zinc finger protein 36, C3H type-like 2 BCL9L 0.016 B-cell CLL/lymphoma 9-like KIF3A 0.016 kinesin family member 3A LOC100129571 0.016 PREDICTED: similar to hCG1646049 LOC100129571 0.016 PREDICTED: similar to hCG1646049 LOC100129571 0.016 PREDICTED: similar to hCG1646049 TPM1 0.016 tropomyosin 1 alpha chain isoform 5 HMCN1 0.016 hemicentin 1 NEUROD2 0.016 neurogenic differentiation 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.