Guide to the Human Genome
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Name: KIF3A Sequence: fasta or formatted (699aa) NCBI GI: 46852174
Description:

kinesin family member 3A

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         39           2
 C cysteine            0.9          6           1
 D aspartate           5.9         41           3
 E glutamate          12.2         85           4
 F phenylalanine       1.7         12           1
 G glycine             5.9         41           2
 H histidine           1.9         13           1
 I isoleucine          5.4         38           2
 K lysine              9.9         69           3
 L leucine             9.2         64           2
 M methionine          3.1         22           2
 N asparagine          4.6         32           2
 P proline             3.0         21           2
 Q glutamine           4.1         29           2
 R arginine            7.2         50           2
 S serine              6.0         42           2
 T threonine           5.3         37           1
 V valine              5.3         37           3
 W tryptophan          0.4          3           1
 Y tyrosine            2.6         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 3A 
KIF3B                 0.476   kinesin family member 3B 
KIF3C                 0.401   kinesin family member 3C 
KIF17                 0.313   kinesin family member 17 isoform b 
KIF17                 0.313   kinesin family member 17 isoform a 
KIF11                 0.232   kinesin family member 11 
KIF16B                0.207   kinesin-like motor protein C20orf23 
KIF5A                 0.204   kinesin family member 5A 
KIF15                 0.204   kinesin family member 15 
KIF4B                 0.204   kinesin family member 4B 
KIF13A                0.204   kinesin family member 13A isoform d 
KIF13A                0.204   kinesin family member 13A isoform c 
KIF13A                0.204   kinesin family member 13A isoform b 
KIF13A                0.204   kinesin family member 13A isoform a 
KIF5C                 0.204   kinesin family member 5C 
KIF13B                0.204   kinesin family member 13B 
KIF4A                 0.203   kinesin family member 4 
KIF5B                 0.196   kinesin family member 5B 
CENPE                 0.195   centromere protein E 
KIF1C                 0.194   kinesin family member 1C 
KIF1B                 0.191   kinesin family member 1B isoform alpha 
KIF1B                 0.191   kinesin family member 1B isoform b 
KIF1A                 0.188   axonal transport of synaptic vesicles 
KIF27                 0.181   kinesin family member 27 
KIF21A                0.179   kinesin family member 21A 
KIF21B                0.176   kinesin family member 21B 
KIF18A                0.175   kinesin family member 18A 
KIF6                  0.174   kinesin family member 6 
KIF18B                0.170   kinesin family member 18B 
KIF19                 0.168   kinesin family member 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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