CCDC28A 24303

Name: CCDC28A	Sequence: fasta or formatted (274aa)		NCBI GI: 27414491
Description: coiled-coil domain containing 28A		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 22 3 C cysteine 1.1 3 1 D aspartate 3.6 10 1 E glutamate 8.8 24 2 F phenylalanine 2.2 6 1 G glycine 6.6 18 2 H histidine 2.2 6 1 I isoleucine 1.5 4 1 K lysine 7.7 21 2 L leucine 12.8 35 3 M methionine 2.2 6 1 N asparagine 4.0 11 1 P proline 4.7 13 1 Q glutamine 5.5 15 1 R arginine 7.3 20 2 S serine 9.9 27 2 T threonine 4.7 13 1 V valine 5.5 15 2 W tryptophan 1.1 3 1 Y tyrosine 0.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 28A CCDC28B 0.285 coiled-coil domain containing 28B TRIP11 0.021 thyroid hormone receptor interactor 11 ANKRD12 0.016 ankyrin repeat domain 12 isoform 2 ANKRD12 0.016 ankyrin repeat domain 12 isoform 1 BICD2 0.016 bicaudal D homolog 2 isoform 1 HIST1H1T 0.016 histone cluster 1, H1t BICD2 0.016 bicaudal D homolog 2 isoform 2 ROCK2 0.014 Rho-associated, coiled-coil containing protein kinas... MYH13 0.014 myosin, heavy polypeptide 13, skeletal muscle [Homo... SLMAP 0.014 sarcolemma associated protein ABCA12 0.014 ATP-binding cassette, sub-family A, member 12 isofor... ABCA12 0.014 ATP-binding cassette, sub-family A, member 12 isofor... STK10 0.012 serine/threonine kinase 10 GIGYF2 0.012 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.012 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.012 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.012 GRB10 interacting GYF protein 2 isoform b TPR 0.012 nuclear pore complex-associated protein TPR ALX1 0.012 cartilage paired-class homeoprotein 1 GLI3 0.010 GLI-Kruppel family member GLI3 NMT1 0.010 N-myristoyltransferase 1 GIMAP6 0.010 GTPase, IMAP family member 6 C9orf30 0.010 hypothetical protein LOC91283 SDHAF1 0.010 succinate dehydrogenase complex assembly factor 1 [... LIMA1 0.010 LIM domain and actin binding 1 isoform c LIMA1 0.010 LIM domain and actin binding 1 isoform a LIMA1 0.010 LIM domain and actin binding 1 isoform b AKAP9 0.010 A-kinase anchor protein 9 isoform 2 SORBS1 0.010 sorbin and SH3 domain containing 1 isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.