Guide to the Human Genome
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Name: RAD21 Sequence: fasta or formatted (631aa) NCBI GI: 5453994
Description:

RAD21 homolog

Referenced in:

DNases, Recombination, and DNA Repair
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         37           3
 C cysteine            0.8          5           1
 D aspartate           8.7         55           3
 E glutamate          11.7         74           4
 F phenylalanine       3.3         21           1
 G glycine             4.4         28           2
 H histidine           1.7         11           1
 I isoleucine          5.5         35           2
 K lysine              6.7         42           2
 L leucine             9.7         61           3
 M methionine          3.0         19           2
 N asparagine          4.1         26           2
 P proline             7.6         48           5
 Q glutamine           5.2         33           4
 R arginine            4.8         30           2
 S serine              5.4         34           2
 T threonine           4.3         27           3
 V valine              4.9         31           2
 W tryptophan          0.8          5           1
 Y tyrosine            1.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAD21 homolog 
RAD21L1               0.318   RAD21-like 1 
REC8                  0.038   REC8 homolog 
REC8                  0.038   REC8 homolog 
UNC13A                0.024   unc-13 homolog A 
PELP1                 0.022   proline, glutamic acid and leucine rich protein 1 [...
REPS2                 0.018   RALBP1 associated Eps domain containing 2 isoform 2...
REPS2                 0.018   RALBP1 associated Eps domain containing 2 isoform 1...
ZNF853                0.017   zinc finger protein 853 
CDC2L2                0.017   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.017   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.017   cell division cycle 2-like 1 (PITSLRE proteins) isof...
NEFH                  0.016   neurofilament, heavy polypeptide 200kDa 
CDC2L1                0.016   cell division cycle 2-like 1 (PITSLRE proteins) isof...
HDGF                  0.015   hepatoma-derived growth factor isoform c 
HDGF                  0.015   hepatoma-derived growth factor isoform b 
HDGF                  0.015   hepatoma-derived growth factor isoform a 
EIF5B                 0.015   eukaryotic translation initiation factor 5B 
TAF3                  0.015   RNA polymerase II transcription factor TAFII140 [Ho...
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.014   neurofilament, medium polypeptide 150kDa isoform 2 ...
PES1                  0.014   pescadillo homolog 1, containing BRCT domain 
TTN                   0.014   titin isoform N2-A 
CCAR1                 0.014   cell-cycle and apoptosis regulatory protein 1 
MYST4                 0.014   MYST histone acetyltransferase (monocytic leukemia)...
TCHH                  0.014   trichohyalin 
CHGA                  0.013   chromogranin A precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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