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Search of human proteins with 156546894
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
(680 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 1353 0.0
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 1211 0.0
gi|209529726 PHD finger protein 21B isoform 2 [Homo sapiens] 275 1e-73
gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens] 263 3e-70
gi|24308089 chromodomain helicase DNA binding protein 5 [Homo sa... 78 2e-14
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 77 7e-14
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 76 1e-13
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 76 1e-13
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 76 1e-13
gi|47419911 transcriptional intermediary factor 1 alpha isoform ... 70 8e-12
gi|47419909 transcriptional intermediary factor 1 alpha isoform ... 70 8e-12
gi|4557291 autoimmune regulator isoform 1 [Homo sapiens] 69 1e-11
gi|4557293 autoimmune regulator isoform 2 [Homo sapiens] 66 9e-11
gi|38788260 bromodomain PHD finger transcription factor isoform ... 65 3e-10
gi|38788274 bromodomain PHD finger transcription factor isoform ... 65 3e-10
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 65 3e-10
gi|74027251 tripartite motif-containing 33 protein isoform beta ... 64 5e-10
gi|74027249 tripartite motif-containing 33 protein isoform alpha... 64 5e-10
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 63 8e-10
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo... 62 2e-09
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 62 2e-09
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 62 2e-09
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 62 2e-09
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 61 4e-09
gi|221139764 PHD and ring finger domains 1 [Homo sapiens] 60 7e-09
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 59 2e-08
gi|38261962 activating transcription factor 7 interacting protei... 58 3e-08
gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens] 58 3e-08
gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens] 58 3e-08
gi|116284392 mucin 2 precursor [Homo sapiens] 58 3e-08
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 1353 bits (3503), Expect = 0.0
Identities = 680/680 (100%), Positives = 680/680 (100%)
Query: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
Sbjct: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
Query: 61 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ 120
NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
Sbjct: 61 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ 120
Query: 121 KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL 180
KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL
Sbjct: 121 KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL 180
Query: 181 QTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVA 240
QTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVA
Sbjct: 181 QTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVA 240
Query: 241 QNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPM 300
QNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPM
Sbjct: 241 QNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPM 300
Query: 301 AQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKRE 360
AQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKRE
Sbjct: 301 AQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKRE 360
Query: 361 ENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNST 420
ENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNST
Sbjct: 361 ENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNST 420
Query: 421 MHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPT 480
MHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPT
Sbjct: 421 MHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPT 480
Query: 481 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKE 540
STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKE
Sbjct: 481 STDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKE 540
Query: 541 EAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEM 600
EAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEM
Sbjct: 541 EAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEM 600
Query: 601 KNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTP 660
KNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTP
Sbjct: 601 KNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTP 660
Query: 661 APSPSSQSCTANCNQGEETK 680
APSPSSQSCTANCNQGEETK
Sbjct: 661 APSPSSQSCTANCNQGEETK 680
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 1211 bits (3134), Expect = 0.0
Identities = 625/681 (91%), Positives = 626/681 (91%), Gaps = 48/681 (7%)
Query: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK
Sbjct: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
Query: 61 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ 120
NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ
Sbjct: 61 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ 120
Query: 121 KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL 180
KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL
Sbjct: 121 KTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNTPVNL 180
Query: 181 QTSSKVTGPGAEAVQIVAKNTVTL-VQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV 239
QTSSKVTGPGAEAVQIVAKNTVTL VQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV
Sbjct: 181 QTSSKVTGPGAEAVQIVAKNTVTLQVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPV 240
Query: 240 AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP 299
AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP
Sbjct: 241 AQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFP 300
Query: 300 MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR 359
MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR
Sbjct: 301 MAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKR 360
Query: 360 EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS 419
EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS
Sbjct: 361 EENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNS 420
Query: 420 TMHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSP 479
TMHPGTRKR +
Sbjct: 421 TMHPGTRKRANEEHW--------------------------------------------- 435
Query: 480 TSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 539
GDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK
Sbjct: 436 --PKGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 493
Query: 540 EEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCME 599
EEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCME
Sbjct: 494 EEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCME 553
Query: 600 MKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATST 659
MKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATST
Sbjct: 554 MKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATST 613
Query: 660 PAPSPSSQSCTANCNQGEETK 680
PAPSPSSQSCTANCNQGEETK
Sbjct: 614 PAPSPSSQSCTANCNQGEETK 634
>gi|209529726 PHD finger protein 21B isoform 2 [Homo sapiens]
Length = 489
Score = 275 bits (702), Expect = 1e-73
Identities = 170/504 (33%), Positives = 252/504 (50%), Gaps = 88/504 (17%)
Query: 198 AKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAP 257
A T+T V T PQ + + LPQVRPK + +++P+AP P
Sbjct: 41 ALGTITAVPVTGPQVSSLQRLAGQGAAV-----LPQVRPKTLIPDSLPVAPGRDRPPKQP 95
Query: 258 QLIQRPVMLTKFTPT-TLPTSQNSIHPVRVVNGQTATIAKTFPMAQLTS-------IVIA 309
Q+ +++ P+ LPT+ N++ V Q +A+ +A S I+
Sbjct: 96 PTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALAEPAALASPLSSAGVAYAIIST 155
Query: 310 TPGTRLA-GPQT---------------------VQLSKPSLEKQ---TVKSHTETDEKQT 344
+P A P T V + +P ++ Q T +S T+E
Sbjct: 156 SPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKVIIIQPQVQTQPESTAESRPPTEEPSQ 215
Query: 345 ESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAV 404
++ +P +ENP+K+AFMV+LGLVT +HLEEIQSKRQERKRR+TANP YSG +
Sbjct: 216 GAQATKKKKEDRPPTQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAYSG-L 274
Query: 405 FEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETT 464
E ERK+ A YLN+ + R P N +
Sbjct: 275 LETERKRLASNYLNNPLFLTARANEDPCWKNEIT-------------------------- 308
Query: 465 FTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPK 524
H++ C+ C++ L C TC YHL CL+PPLKT PK
Sbjct: 309 ----------------------HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPK 346
Query: 525 GMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLE 584
G+W+CPRCQ + LKK+E +PW G LAIVHSY+ +K KEEEKQKLL+ S+L+ E +QLE
Sbjct: 347 GVWVCPRCQQKALKKDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLE 406
Query: 585 QKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAIS 644
++ ++L++++ KC+E+K ++LARQ+ SSL++++ L+RLI G L + + + +
Sbjct: 407 ERDRRLASAVQKCLELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLL 466
Query: 645 NGPDCTPPANAATSTPAPSPSSQS 668
GP T P+ AAT P +
Sbjct: 467 AGP-WTKPSVAATHPTVQHPQGHN 489
Score = 47.4 bits (111), Expect = 4e-05
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 41/208 (19%)
Query: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQK-------- 52
MELQ+ EAL VE+ HQ N DLKKQLHE Q +I ALS+KQ
Sbjct: 1 MELQSRPEALAVELARHQ-----------NGDLKKQLHERQPRIAALSDKQALGTITAVP 49
Query: 53 ---RVVEQLRK-----NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHH 104
V L++ ++ Q +P LP + + + +Q P Q +
Sbjct: 50 VTGPQVSSLQRLAGQGAAVLPQVRPKTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKN- 108
Query: 105 HAQQSAAASPNLTASQKTVTTASMITTKTLPLVLKAATATMPAS------VVGQRPTIAM 158
SP L + TV+ ++ L AA A+ +S ++ P+ A
Sbjct: 109 -------PSPALPTANNTVSHVPAPGSQPQALAEPAALASPLSSAGVAYAIISTSPSNAA 161
Query: 159 VTAINSQKAVLSTDVQNTPVNLQTSSKV 186
A ++ +V+S ++ P+ + +KV
Sbjct: 162 AMAPSTAVSVVSDSIKVQPLLISADNKV 189
>gi|19923937 PHD finger protein 21B isoform 1 [Homo sapiens]
Length = 531
Score = 263 bits (673), Expect = 3e-70
Identities = 210/683 (30%), Positives = 303/683 (44%), Gaps = 167/683 (24%)
Query: 1 MELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRK 60
MELQ+ EAL VE+ HQ N DLKKQLH E+Q R+ K
Sbjct: 1 MELQSRPEALAVELARHQ-----------NGDLKKQLH----------ERQPRIAALSDK 39
Query: 61 NLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQ 120
+ I +P + Q LQ+L A Q AA P +
Sbjct: 40 QALGT--------ITAVP-----VTGPQVSSLQRL----------AGQGAAVLPQVRP-- 74
Query: 121 KTVTTASMITTKTLPLVLKAATATMPASVVG-QRPTIAMVTAINSQKAVLSTDVQNT--- 176
KT+ S+ K A+VV + P+ A+ TA N+ V + Q
Sbjct: 75 KTLIPDSLPVAPGRDRPPKQPPTFQKATVVSVKNPSPALPTANNTVSHVPAPGSQPQALA 134
Query: 177 -PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATP----PQPIKVPQFI------PPPRLT 225
P L + G + N + +T IKV + PPPRL
Sbjct: 135 EPAALASPLSSAGVAYAIISTSPSNAAAMAPSTAVSVVSDSIKVQPLLISADNKPPPRLL 194
Query: 226 PRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVR 285
P+ P P+ +++P+ P P P L+ P+ + I V
Sbjct: 195 SSPH--PATHHCPLHPSSLPLTP-PSPSLS-------------------PSPLHGIFQVI 232
Query: 286 VVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTE 345
++ Q T P++ S+P E+ + + +K+ E
Sbjct: 233 IIQPQVQT-----------------------QPESTAESRPPTEEPS--QGAQATKKKKE 267
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVF 405
R P +ENP+K+AFMV+LGLVT +HLEEIQSKRQERKRR+TANP YSG +
Sbjct: 268 DR---------PPTQENPEKIAFMVALGLVTTEHLEEIQSKRQERKRRSTANPAYSG-LL 317
Query: 406 EPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTF 465
E ERK+ A YLN+ + R P N +
Sbjct: 318 ETERKRLASNYLNNPLFLTARANEDPCWKNEIT--------------------------- 350
Query: 466 TFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKG 525
H++ C+ C++ L C TC YHL CL+PPLKT PKG
Sbjct: 351 ---------------------HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKG 389
Query: 526 MWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQ 585
+W+CPRCQ + LKK+E +PW G LAIVHSY+ +K KEEEKQKLL+ S+L+ E +QLE+
Sbjct: 390 VWVCPRCQQKALKKDEGVPWTGMLAIVHSYVTHKTVKEEEKQKLLQRGSELQNEHQQLEE 449
Query: 586 KVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISN 645
+ ++L++++ KC+E+K ++LARQ+ SSL++++ L+RLI G L + + + +
Sbjct: 450 RDRRLASAVQKCLELKTSLLARQRGTQSSLDRLRALLRLIQGEQLLQVTMTTTSPAPLLA 509
Query: 646 GPDCTPPANAATSTPAPSPSSQS 668
GP T P+ AAT P +
Sbjct: 510 GP-WTKPSVAATHPTVQHPQGHN 531
>gi|24308089 chromodomain helicase DNA binding protein 5 [Homo
sapiens]
Length = 1954
Score = 78.2 bits (191), Expect = 2e-14
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 30/147 (20%)
Query: 423 PGTRKRGRPPKYNAVLGFGALTP---------TSPQSSHPDSPENEKTETTFTFPAPVQP 473
PG RK+ + K G G T ++ + S E+E+ E+ F A +
Sbjct: 250 PGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGISNKRKKGSSSEEDEREESDFD-SASIHS 308
Query: 474 VSLPSPTST----------------DGD----IHEDFCSVCRKSGQLLMCDTCSRVYHLD 513
S+ S S DGD H+D+C VC++ G++++CDTC R YHL
Sbjct: 309 ASVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLV 368
Query: 514 CLDPPLKTIPKGMWICPRCQDQMLKKE 540
CLDP L+ P+G W CP C+ + ++ E
Sbjct: 369 CLDPELEKAPEGKWSCPHCEKEGIQWE 395
Score = 74.7 bits (182), Expect = 3e-13
Identities = 30/54 (55%), Positives = 35/54 (64%)
Query: 485 DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLK 538
D H +FC VC+ G+LL CD C YHL CL+PPL IP G W+CPRC LK
Sbjct: 413 DDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLK 466
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 76.6 bits (187), Expect = 7e-14
Identities = 30/56 (53%), Positives = 37/56 (66%)
Query: 483 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLK 538
+ D H +FC VC+ G+LL CDTC YH+ CL+PPL IP G W+CPRC LK
Sbjct: 444 EDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALK 499
Score = 75.9 bits (185), Expect = 1e-13
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 447 SPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTC 506
S S+ S +K TT + V+ TD H+D+C VC++ G++++CDTC
Sbjct: 332 SDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVDGYETD---HQDYCEVCQQGGEIILCDTC 388
Query: 507 SRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKE 540
R YH+ CLDP ++ P+G W CP C+ + ++ E
Sbjct: 389 PRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWE 422
Score = 38.1 bits (87), Expect = 0.027
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 139 KAATATMPASVVGQRPTIA---MVTAINSQKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQ 195
KA + + + + P IA M+ + ++ ST N P + + V A AV
Sbjct: 179 KAFSQFVRPLIAAKNPKIAVSKMMMVLGAKWREFST---NNPFKGSSGASVAAAAAAAVA 235
Query: 196 IVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLA 255
+V ++ VT + PP P P +P + + P R KP +P A P P
Sbjct: 236 VV-ESMVTATEVAPPPP---PVEVPIRKAKTKEGKGPNARRKPKGSPRVPDAKKPKPKKV 291
Query: 256 APQLIQ 261
AP I+
Sbjct: 292 APLKIK 297
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 75.9 bits (185), Expect = 1e-13
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 20/95 (21%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWP 546
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CP C+ +E + W
Sbjct: 378 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCE------KEGVQW- 430
Query: 547 GTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQERE 581
AKEEE++ + + ++E E
Sbjct: 431 -------------EAKEEEEEYEEEGEEEGEKEEE 452
Score = 73.6 bits (179), Expect = 6e-13
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 485 DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLK 538
D H ++C VC+ G+LL CD C YH+ CL+PPL IP G W+CPRC +LK
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLK 506
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 75.9 bits (185), Expect = 1e-13
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 20/95 (21%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWP 546
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CP C+ +E + W
Sbjct: 378 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCE------KEGVQW- 430
Query: 547 GTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQERE 581
AKEEE++ + + ++E E
Sbjct: 431 -------------EAKEEEEEYEEEGEEEGEKEEE 452
Score = 73.6 bits (179), Expect = 6e-13
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 485 DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLK 538
D H ++C VC+ G+LL CD C YH+ CL+PPL IP G W+CPRC +LK
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLK 506
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 75.9 bits (185), Expect = 1e-13
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 20/95 (21%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWP 546
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CP C+ +E + W
Sbjct: 437 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCE------KEGVQW- 489
Query: 547 GTLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQERE 581
AKEEE++ + + ++E E
Sbjct: 490 -------------EAKEEEEEYEEEGEEEGEKEEE 511
Score = 73.6 bits (179), Expect = 6e-13
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 485 DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLK 538
D H ++C VC+ G+LL CD C YH+ CL+PPL IP G W+CPRC +LK
Sbjct: 512 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLK 565
>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
[Homo sapiens]
Length = 1050
Score = 69.7 bits (169), Expect = 8e-12
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 452 HPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYH 511
H D+ N K+E + P+ P+ + T + D +ED+C+VC+ G+LL C+ C +V+H
Sbjct: 793 HQDNSSNGKSE--WLDPSQKSPLHV-GETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFH 849
Query: 512 LDCLDPPLKTIPKGMWICPRCQD 534
L C P L P G WIC C+D
Sbjct: 850 LSCHVPTLTNFPSGEWICTFCRD 872
Score = 31.6 bits (70), Expect = 2.5
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 455 SPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDC 514
+P ET PAP PVS SP +T + C VC S + + D
Sbjct: 93 APMLGSAETPPPVPAPGSPVSGSSPFATQVGVIR--CPVC--SQECAERHIIDNFFVKDT 148
Query: 515 LDPPLKTIPKGMWICPRCQD 534
+ P T+ K +C C+D
Sbjct: 149 TEVPSSTVEKSNQVCTSCED 168
>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
[Homo sapiens]
Length = 1016
Score = 69.7 bits (169), Expect = 8e-12
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 452 HPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYH 511
H D+ N K+E + P+ P+ + T + D +ED+C+VC+ G+LL C+ C +V+H
Sbjct: 759 HQDNSSNGKSE--WLDPSQKSPLHV-GETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFH 815
Query: 512 LDCLDPPLKTIPKGMWICPRCQD 534
L C P L P G WIC C+D
Sbjct: 816 LSCHVPTLTNFPSGEWICTFCRD 838
Score = 31.6 bits (70), Expect = 2.5
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 455 SPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDC 514
+P ET PAP PVS SP +T + C VC S + + D
Sbjct: 93 APMLGSAETPPPVPAPGSPVSGSSPFATQVGVIR--CPVC--SQECAERHIIDNFFVKDT 148
Query: 515 LDPPLKTIPKGMWICPRCQD 534
+ P T+ K +C C+D
Sbjct: 149 TEVPSSTVEKSNQVCTSCED 168
>gi|4557291 autoimmune regulator isoform 1 [Homo sapiens]
Length = 545
Score = 69.3 bits (168), Expect = 1e-11
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 473 PVSLPSPTSTDGDIH---EDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWIC 529
P++LPS D +H ED C+VCR G+L+ CD C R +HL CL PPL+ IP G W C
Sbjct: 282 PLALPS----DPQLHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRC 337
Query: 530 PRC 532
C
Sbjct: 338 SSC 340
>gi|4557293 autoimmune regulator isoform 2 [Homo sapiens]
Length = 348
Score = 66.2 bits (160), Expect = 9e-11
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
+ED C+VCR G+L+ CD C R +HL CL PPL+ IP G W C C
Sbjct: 98 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 143
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 64.7 bits (156), Expect = 3e-10
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
++D C VC K G LL C+TCS VYHL+C+ PPL+ +P+ W C C
Sbjct: 389 YDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
Score = 44.7 bits (104), Expect = 3e-04
Identities = 94/443 (21%), Positives = 163/443 (36%), Gaps = 86/443 (19%)
Query: 167 AVLSTDVQNTPVNLQTSSKVTGPGAEA-----VQIVAKNTVTLVQATPPQPIKV------ 215
A +T T + T++ TG ++ +Q+ T+ Q++ P +
Sbjct: 2341 ATTATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQ 2400
Query: 216 PQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPP------------PMLAA---PQLI 260
P P P+ P+ P+V+ +P Q ++ P P +AA PQ
Sbjct: 2401 PSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSN 2460
Query: 261 ---QRPVMLTKFTPTTL-PTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLA 316
Q PV + + T + P++ + + P + QT T ++ P+ TS+ I + G +
Sbjct: 2461 VQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTT-SQPIPIQPHTSLQIPSQGQPQS 2519
Query: 317 GPQTVQLSKPSLEKQTVKSHTETDEKQTESRTIT----------------PPAAPKPKRE 360
PQ V +E K E++ R I AA K KRE
Sbjct: 2520 QPQVVMKHNAVIEHLKQKKSMTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKRE 2579
Query: 361 ENPQKLAF---MVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKK------ 411
E+ ++ L + H E++++ + K+R + V E ++
Sbjct: 2580 ESVEQKRSKQNATKLSALLFKHKEQLRA--EILKKRALLDKDLQIEVQEELKRDLKIKKE 2637
Query: 412 ------SAVTYLNSTMHPGT-------RKRGRPPKYNAVLGFGAL-TPTSPQSSHPDSPE 457
+ T + + P T PP AV G L TPT P +S E
Sbjct: 2638 KDLMQLAQATAVAAPCPPVTPAPPAPPAPPPSPPPPPAVQHTGLLSTPTLPAASQKRKRE 2697
Query: 458 NEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDFCSVCR----KSGQLLMCDTCSRVYHLD 513
EK ++ + + + S TS + +C+ +S + CD C YH
Sbjct: 2698 EEKDSSSKS-----KKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGR 2752
Query: 514 C---LDPPLKTIPKGMWICPRCQ 533
C L + I + ++CP+CQ
Sbjct: 2753 CVGILQSEAELIDE--YVCPQCQ 2773
Score = 44.3 bits (103), Expect = 4e-04
Identities = 82/404 (20%), Positives = 147/404 (36%), Gaps = 57/404 (14%)
Query: 272 TTLPTSQNSIHPVRVVNG--QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLE 329
T LP + + NG Q A S T T AG + SK S +
Sbjct: 2313 TVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSPQ 2372
Query: 330 KQTVKSHT-------ETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEE 382
Q + T + + +T P A P+P+ + PQ A E
Sbjct: 2373 MQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQ--PQSPA------------QPE 2418
Query: 383 IQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGA 442
+Q++ + + + T ++ V S A +P +S+ + + P + +G+ P
Sbjct: 2419 VQTQPEVQTQTTVSSHVPSEA--QPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTR 2476
Query: 443 LTPTSPQSSHPDSPENEKTETTFTFPAPVQP-VSLPSPTSTDGDIHEDFCSVCRKSGQLL 501
+ P++P P + + +TT + P P+QP SL P+ V K ++
Sbjct: 2477 IRPSTPSQLSPG--QQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQ---VVMKHNAVI 2531
Query: 502 MCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYKAA 561
+ + P + + M +C +Q++K YI K
Sbjct: 2532 -----EHLKQKKSMTPAEREENQRMIVC----NQVMK----------------YILDKID 2566
Query: 562 KEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVKQL 621
KEE KQ K + E+++ +Q +LS + K E + +++ + +++
Sbjct: 2567 KEE-KQAAKKRKREESVEQKRSKQNATKLSALLFKHKEQLRAEILKKRALLDKDLQIEVQ 2625
Query: 622 IRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPS 665
L + + K D A + C P A + PAP PS
Sbjct: 2626 EELKRDLKIKKEKDLMQLAQATAVAAPCPPVTPAPPAPPAPPPS 2669
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 64.7 bits (156), Expect = 3e-10
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
++D C VC K G LL C+TCS VYHL+C+ PPL+ +P+ W C C
Sbjct: 389 YDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
Score = 38.5 bits (88), Expect = 0.021
Identities = 76/396 (19%), Positives = 140/396 (35%), Gaps = 57/396 (14%)
Query: 66 QEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPNLTASQKTVTT 125
+++ K Q + L AQ + + Q Q AQ P A + T
Sbjct: 2237 EQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQ 2296
Query: 126 ASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTA----INSQKAVLSTDVQNTPVNLQ 181
+ T T+ + P +P +A + + Q V T +
Sbjct: 2297 PEVQTQTTVSS--HVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPS 2354
Query: 182 TSSKVTGPGAEAVQIVAKNTVTLVQATP------PQPIKVPQFIPPPRLTPRPNFLPQVR 235
T S+++ VQ + + T QP PQ + L QV
Sbjct: 2355 TPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVT 2414
Query: 236 PKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLP--TSQNSIHPVRV-----VN 288
++ + I P ++A PQL Q+ +L++ + +Q S P ++ +
Sbjct: 2415 VSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPIQ 2474
Query: 289 GQTATIAKTFPMAQLTSIVIATPGTRLAGPQ--------------------TVQLSKPS- 327
Q ++ +T + + ++ A+ +L Q T+Q S S
Sbjct: 2475 IQQSSAVQTHQIQNVVTVQAASVQEQLQRVQQLRDQQQKKKQQQIEIKREHTLQASNQSE 2534
Query: 328 -LEKQTVKSHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEI-QS 385
++KQ V H E + +++TP +REEN + M+ V L++I +
Sbjct: 2535 IIQKQVVMKHNAVIEHLKQKKSMTP-----AEREENQR----MIVCNQVMKYILDKIDKE 2585
Query: 386 KRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTM 421
++Q K+R V E +R K T L++ +
Sbjct: 2586 EKQAAKKRKREESV------EQKRSKQNATKLSALL 2615
Score = 37.0 bits (84), Expect = 0.060
Identities = 63/302 (20%), Positives = 115/302 (38%), Gaps = 59/302 (19%)
Query: 6 LQEALKVEIQVHQKLVAQMKQD----PQNADLKK----------QLHELQAKIT---ALS 48
LQ+ ++V Q+ ++VAQ++ PQ L+ Q H++Q +T A
Sbjct: 2438 LQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPIQIQQSSAVQTHQIQNVVTVQAASV 2497
Query: 49 EKQKRVVEQLRKNLIVKQEQPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHHHAQQ 108
++Q + V+QLR +Q K Q Q + E+ LQ + Q + +Q+Q H+ +
Sbjct: 2498 QEQLQRVQQLR------DQQQKKKQQQIEIKREHTLQASNQSEI--IQKQVVMKHNAVIE 2549
Query: 109 SAAASPNLTASQKTVTTASMITTKTLPLVL--------KAATATMPASVVGQRPTIAMVT 160
++T +++ ++ + + +L +AA V Q+ + T
Sbjct: 2550 HLKQKKSMTPAEREENQRMIVCNQVMKYILDKIDKEEKQAAKKRKREESVEQKRSKQNAT 2609
Query: 161 AINS----QKAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVP 216
+++ K L ++ L ++ + K L+Q +
Sbjct: 2610 KLSALLFKHKEQLRAEILKKRALLDKDLQIEVQEELKRDLKIKKEKDLMQLAQATAVAA- 2668
Query: 217 QFIPPPRLTPRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPT 276
P P +TP P P PAPPP P +Q +L+ TPT
Sbjct: 2669 ---PCPPVTPAP----------------PAPPAPPPSPPPPPAVQHTGLLS--TPTLPAA 2707
Query: 277 SQ 278
SQ
Sbjct: 2708 SQ 2709
Score = 32.7 bits (73), Expect = 1.1
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 552 VHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTILARQKEM 611
V YI K KEE KQ K + E+++ +Q +LS + K E + +++ +
Sbjct: 2574 VMKYILDKIDKEE-KQAAKKRKREESVEQKRSKQNATKLSALLFKHKEQLRAEILKKRAL 2632
Query: 612 HSSLEKVKQLIRLIHGIDLSKPVDSEATVGAISNGPDCTPPANAATSTPAPSPS 665
+++ L + + K D A + C P A + PAP PS
Sbjct: 2633 LDKDLQIEVQEELKRDLKIKKEKDLMQLAQATAVAAPCPPVTPAPPAPPAPPPS 2686
Score = 30.8 bits (68), Expect = 4.3
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 18/129 (13%)
Query: 12 VEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSE----KQKRVVEQLRKNLIVKQE 67
+ IQ H L + PQ+ ++Q+ LS Q V R L ++Q
Sbjct: 2375 IPIQPHTSLQIPSQGQPQSQP------QVQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQP 2428
Query: 68 QPDKFQIQPLPQSENKLQTAQQQPLQQLQQQQQYHHH--------HAQQSAAASPNLTAS 119
QP + L Q L Q Q + Q+Q QQ QQS+A + +
Sbjct: 2429 QPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPIQIQQSSAVQTHQIQN 2488
Query: 120 QKTVTTASM 128
TV AS+
Sbjct: 2489 VVTVQAASV 2497
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 64.7 bits (156), Expect = 3e-10
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 491 CSVCRKSGQ----LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWP 546
CS CR G+ +L CD+C R +H++C DPPL +PKGMWIC C+ + KK +
Sbjct: 272 CSACRVQGRNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPK--KKGRKLLHE 329
Query: 547 GTLAIVHSYI-AYKAAKEEEKQKLLKWSSD 575
I Y K + KQ+LL +SD
Sbjct: 330 KAAQIKRRYAKPIGRPKNKLKQRLLSVTSD 359
>gi|74027251 tripartite motif-containing 33 protein isoform beta
[Homo sapiens]
Length = 1110
Score = 63.9 bits (154), Expect = 5e-10
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 483 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 534
D D +ED+C+VC+ G LL C+ C +V+HL C P L + P G WIC C+D
Sbjct: 882 DDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRD 933
Score = 33.1 bits (74), Expect = 0.87
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 468 PAPVQPVSLPSPTSTDGDIHE---DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPK 524
P P + +S+P P ++GDI + C VCR+ + D + D + P + K
Sbjct: 155 PEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQ--ECRQIDLVDNYFVKDTSEAPSSSDEK 212
Query: 525 GMWICPRCQD 534
+C C+D
Sbjct: 213 SEQVCTSCED 222
>gi|74027249 tripartite motif-containing 33 protein isoform alpha
[Homo sapiens]
Length = 1127
Score = 63.9 bits (154), Expect = 5e-10
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 483 DGDIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 534
D D +ED+C+VC+ G LL C+ C +V+HL C P L + P G WIC C+D
Sbjct: 882 DDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRD 933
Score = 33.1 bits (74), Expect = 0.87
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 468 PAPVQPVSLPSPTSTDGDIHE---DFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPK 524
P P + +S+P P ++GDI + C VCR+ + D + D + P + K
Sbjct: 155 PEPERQLSVPIPGGSNGDIQQVGVIRCPVCRQ--ECRQIDLVDNYFVKDTSEAPSSSDEK 212
Query: 525 GMWICPRCQD 534
+C C+D
Sbjct: 213 SEQVCTSCED 222
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 63.2 bits (152), Expect = 8e-10
Identities = 33/92 (35%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 443 LTPTSPQSSHPDSPENEKTETTFTFP-APVQPVSLPSPTSTDGDIHEDFCSVCRKSGQLL 501
+T TS P E E P P P+P +EDFC+VC G+LL
Sbjct: 929 VTVTSLAGQRPPEVEGTSPEEHRLIPRTPGAKKGPPAPIE-----NEDFCAVCLNGGELL 983
Query: 502 MCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
CD C +V+HL C P L + P G W+C C+
Sbjct: 984 CCDRCPKVFHLSCHVPALLSFPGGEWVCTLCR 1015
>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
sapiens]
Length = 1483
Score = 61.6 bits (148), Expect = 2e-09
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 491 CSVCRKSGQ---LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPG 547
C VCRK G+ L++CD C++ +HL CL P L +P G W CP CQ ++
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPATARRNSR----- 1241
Query: 548 TLAIVHSYIAYKAAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSNSISKCMEMKNTIL 605
+Y A+++ E + + + ++E E+ + +V L K + K++++
Sbjct: 1242 ----GRNYTEESASEDSEDDESDEEEEEEEEEEEEEDYEVAGLRLRPRKTIRGKHSVI 1295
Score = 30.8 bits (68), Expect = 4.3
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 2 ELQTLQEALKVEIQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRKN 61
EL++L + + E+ H+K A M ++ + LKK+ EL+ K L EK K E+ K
Sbjct: 517 ELRSLVQK-RYELLEHKKRWASMSEEQRKEYLKKKREELKKK---LKEKAK---ERREKE 569
Query: 62 LIVKQEQPDKFQIQPL 77
++ + E+ +++ Q L
Sbjct: 570 MLERLEKQKRYEDQEL 585
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 61.6 bits (148), Expect = 2e-09
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 491 CSVCRKSGQ----LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
CS CR G+ +L CD+C R +H++C DPPL +PKGMWIC C+
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR 311
Score = 34.7 bits (78), Expect = 0.30
Identities = 51/169 (30%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 206 QATPPQPIKVPQFIPPPRLTPRPN-FLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPV 264
Q PP P + PQ PPP+ P P PQ +P+ Q P PPP P L Q
Sbjct: 1649 QQPPPPPPQQPQ-PPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQCS- 1706
Query: 265 MLTKFTPTTL--------PTSQNSIH---PVRVVNGQTATIAKTFPMA---QLTSIVI-- 308
M FTP + T SI+ P G + + TF +A QLT+ ++
Sbjct: 1707 MNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDP 1766
Query: 309 -ATPGTR----LAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPP 352
A P + + +V LS L Q SH Q ++ T+TPP
Sbjct: 1767 HAMPYSHSPAVTSYATSVSLSNTGL-AQLAPSHPLAGTPQAQA-TMTPP 1813
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 61.6 bits (148), Expect = 2e-09
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 491 CSVCRKSGQ----LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
CS CR G+ +L CD+C R +H++C DPPL +PKGMWIC C+
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR 311
Score = 34.7 bits (78), Expect = 0.30
Identities = 51/169 (30%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 206 QATPPQPIKVPQFIPPPRLTPRPN-FLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPV 264
Q PP P + PQ PPP+ P P PQ +P+ Q P PPP P L Q
Sbjct: 1649 QQPPPPPPQQPQ-PPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQCS- 1706
Query: 265 MLTKFTPTTL--------PTSQNSIH---PVRVVNGQTATIAKTFPMA---QLTSIVI-- 308
M FTP + T SI+ P G + + TF +A QLT+ ++
Sbjct: 1707 MNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDP 1766
Query: 309 -ATPGTR----LAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPP 352
A P + + +V LS L Q SH Q ++ T+TPP
Sbjct: 1767 HAMPYSHSPAVTSYATSVSLSNTGL-AQLAPSHPLAGTPQAQA-TMTPP 1813
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 61.6 bits (148), Expect = 2e-09
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 4/47 (8%)
Query: 491 CSVCRKSGQ----LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
CS CR G+ +L CD+C R +H++C DPPL +PKGMWIC C+
Sbjct: 265 CSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICR 311
Score = 34.7 bits (78), Expect = 0.30
Identities = 51/169 (30%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 206 QATPPQPIKVPQFIPPPRLTPRPN-FLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPV 264
Q PP P + PQ PPP+ P P PQ +P+ Q P PPP P L Q
Sbjct: 1649 QQPPPPPPQQPQ-PPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQCS- 1706
Query: 265 MLTKFTPTTL--------PTSQNSIH---PVRVVNGQTATIAKTFPMA---QLTSIVI-- 308
M FTP + T SI+ P G + + TF +A QLT+ ++
Sbjct: 1707 MNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDP 1766
Query: 309 -ATPGTR----LAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPP 352
A P + + +V LS L Q SH Q ++ T+TPP
Sbjct: 1767 HAMPYSHSPAVTSYATSVSLSNTGL-AQLAPSHPLAGTPQAQA-TMTPP 1813
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 60.8 bits (146), Expect = 4e-09
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 445 PTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPTSTDGDIHEDF-CSVCRKSGQLLMC 503
P+ P SS+ SP++ T P L + + + D DF C VC + GQ+L C
Sbjct: 43 PSPPHSSNGHSPQDTSTSPIKKKKKP----GLLNSNNKEQDGRNDFYCWVCHREGQVLCC 98
Query: 504 DTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 533
+ C RVYH CL L + P+G W CP C+
Sbjct: 99 ELCPRVYHAKCL--RLTSEPEGDWFCPECE 126
>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
Length = 1648
Score = 60.1 bits (144), Expect = 7e-09
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 476 LPSPTSTDGDIHED--FCSVCRKSGQ---LLMCDTCSRVYHLDCLDPPLKTIPKGMWICP 530
+P + + ED FC VC +S + LL+CD C YH++CLDPPL+ +P W CP
Sbjct: 169 IPVENTKASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCP 228
Query: 531 RC 532
C
Sbjct: 229 EC 230
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 58.5 bits (140), Expect = 2e-08
Identities = 93/397 (23%), Positives = 126/397 (31%), Gaps = 45/397 (11%)
Query: 113 SPNLTASQKTVTTASMITTKTLPLVLKAATAT------MPASVVGQRPTIAMVTAINSQK 166
+P T +Q TT TT P T T + V PT S
Sbjct: 1348 TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTSTP 1407
Query: 167 AVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTP 226
+T V TP T + T P + T T QA P I + P TP
Sbjct: 1408 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPTPTAITTTSTVTP---TP 1464
Query: 227 RPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRV 286
P P+ + P P P T TPT PT + P
Sbjct: 1465 TPTGTQTPTTTPIT-TTTTVTPTPTPTGTQTPTPTAITTTTTVTPTPTPTGTQT--PTST 1521
Query: 287 VNGQTATIAKTFPMAQLTSIVIATP-GTRLAGPQTVQLSKPSLEKQT-VKSHTETDEKQT 344
T T+ T TP GT+ P + + T + T T T
Sbjct: 1522 PITTTTTVTPT-----------PTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPIT 1570
Query: 345 ESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRT---TANPVYS 401
+ T+TP P P + P + + + +S T TA P +
Sbjct: 1571 TTTTVTP--TPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPT 1628
Query: 402 GAVFEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTS--PQSSHP------ 453
G S T + T P T G PP + + LT ++ P+SS P
Sbjct: 1629 GTQTPTMIPISTTTTVTPTPTPTTGSTG-PPTHTSTAPIAELTTSNPPPESSTPQTSRST 1687
Query: 454 DSPENEKTETTFTFPAPVQ-----PVSLP-SPTSTDG 484
SP E T T P ++ P S P +PT+T G
Sbjct: 1688 SSPLTESTTLLSTLPPAIEMTSTAPPSTPTAPTTTSG 1724
Score = 34.7 bits (78), Expect = 0.30
Identities = 55/233 (23%), Positives = 76/233 (32%), Gaps = 25/233 (10%)
Query: 267 TKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPMAQ------LTSIVIATPGTRLAGPQT 320
T TPT PTS S P + T T T Q +T+ TP G QT
Sbjct: 1320 TTVTPTPTPTSTQSTTPTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQT 1379
Query: 321 VQLSKPSLEKQTVK-------SHTETDEKQTESRTITPPAAPKPKREENPQKLAFMVSLG 373
+ P TV + T T T + T+TP P P + P +
Sbjct: 1380 -PTTTPITTTTTVTPTPTPTGTQTPTSTPITTTTTVTP--TPTPTGTQTPTTTPITTTTT 1436
Query: 374 LVTHDHLEEIQSKRQERKRRT---TANPVYSGAVFEPERKKSAVTYLNSTMHP-GTRKRG 429
+ Q+ T T P +G + T + T P GT
Sbjct: 1437 VTPTPTPTGTQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGT---- 1492
Query: 430 RPPKYNAVLGFGALTPTSPQSSHPDSPENEKTETTFTFPAPVQPVSLPSPTST 482
+ P A+ +TPT P + +P + TT T P +PT T
Sbjct: 1493 QTPTPTAITTTTTVTPT-PTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPT 1544
Score = 32.3 bits (72), Expect = 1.5
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 111 AASPNLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLS 170
+++P + S + T S TLP ++ + P++ PT S +
Sbjct: 1678 SSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTA--PTTTSGGHTLSPPPSTT 1735
Query: 171 TDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPN 229
T TP T+ + P VQ T T P P+ P I L P P+
Sbjct: 1736 TSPPGTPTRGTTTGSSSAPTPSTVQ----TTTTSAWTPTPTPLSTPSIIRTTGLRPYPS 1790
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 58.2 bits (139), Expect = 3e-08
Identities = 74/301 (24%), Positives = 124/301 (41%), Gaps = 42/301 (13%)
Query: 6 LQEAL-KVEIQVHQKLVAQMKQDPQNADLKKQ----LHELQAKITALSEKQKRVVEQLRK 60
L+E L ++ V K +A++K + + K+ L ELQAKI L+++ + E L+K
Sbjct: 603 LEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTELQAKIARLTKRFEAAKEDLKK 662
Query: 61 NLIVKQEQPDKFQIQPLP-----QSENKLQTAQQQPLQQLQQQQQYHHHHAQQSAAASPN 115
+ E P + P S N + ++Q+ + ++ A S N
Sbjct: 663 ----RHEHPPNPPVSPGKTVNDVNSNNNMSYRNAGTVRQMLESKRNVSESAPPSFQTPVN 718
Query: 116 LTASQKTVTTASMITTK---TLPLVLKAATAT--MPASVVGQRPTIAMVTAINSQKAVLS 170
+S VT ++++++ P+ + TAT +PA T+ T + S +
Sbjct: 719 TVSSTNLVTPPAVVSSQPKLQTPVTSGSLTATSVLPAP---NTATVVATTQVPSGNPQPT 775
Query: 171 TDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPR---LTPR 227
+Q PV L V + Q++ + TLV P ++ PP LT
Sbjct: 776 ISLQPLPVILHVPVAV----SSQPQLLQSHPGTLVTNQPSGNVEFISVQSPPTVSGLTKN 831
Query: 228 PNFLPQVRPKPVAQNNIPIAPAP-----PPMLAAP-------QLIQRPVMLTKFTPTTLP 275
P LP + P P NN+P P+P P AAP Q + + + T T+LP
Sbjct: 832 PVSLPSL-PNPTKPNNVPSVPSPSIQRNPTASAAPLGTTLAVQAVPTAHSIVQATRTSLP 890
Query: 276 T 276
T
Sbjct: 891 T 891
>gi|75677357 PHD finger protein 12 isoform 1 [Homo sapiens]
Length = 1004
Score = 58.2 bits (139), Expect = 3e-08
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPL--KTIPKGMWICPRCQDQMLKKEE 541
+ D C C++ G LL CD C +HL C +PPL + +P G W+C RC + K+E+
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
Score = 52.0 bits (123), Expect = 2e-06
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 491 CSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICP 530
C C +S L+ CD C ++H+DCL+PPL +P G W+CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
>gi|30842829 PHD finger protein 12 isoform 2 [Homo sapiens]
Length = 704
Score = 58.2 bits (139), Expect = 3e-08
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPL--KTIPKGMWICPRCQDQMLKKEE 541
+ D C C++ G LL CD C +HL C +PPL + +P G W+C RC + K+E+
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKKREQ 111
Score = 52.0 bits (123), Expect = 2e-06
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 491 CSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICP 530
C C +S L+ CD C ++H+DCL+PPL +P G W+CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 57.8 bits (138), Expect = 3e-08
Identities = 62/263 (23%), Positives = 78/263 (29%), Gaps = 22/263 (8%)
Query: 114 PNLTASQKTVTTASMITTKT------LPLVLKAATATMPASVVGQRPTIAMVTAINSQKA 167
P T S T TT + T T P+ A+T T+P + PT T
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPT---TTTTTPPPT 1536
Query: 168 VLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATP-------PQPIKVPQFIP 220
+ TP+ TS+ P T TP P P + P
Sbjct: 1537 TTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTP 1596
Query: 221 PPRLTPRPNFLPQVRPKPVAQ----NNIPIAPAPPPMLAAPQLIQRPVMLTKFTP--TTL 274
PP TP P P P PI P P P T TP TT
Sbjct: 1597 PPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT 1656
Query: 275 PTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVK 334
P+ + P + T T P + +T+ T T S P T
Sbjct: 1657 PSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPS 1716
Query: 335 SHTETDEKQTESRTITPPAAPKP 357
S T T T +P P P
Sbjct: 1717 STTTPSPPPTTMTTPSPTTTPSP 1739
Score = 56.2 bits (134), Expect = 1e-07
Identities = 67/305 (21%), Positives = 93/305 (30%), Gaps = 34/305 (11%)
Query: 200 NTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRPKPVAQNNIPIA----------PA 249
+T TL T P P PPP TP P P P + PI+ P+
Sbjct: 1412 STTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPS 1471
Query: 250 PPPMLAAPQLI--QRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTATIAKTFPMAQLTSIV 307
PP +P P T P T S + P+ T T P T+
Sbjct: 1472 PPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTT 1531
Query: 308 IATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRTITPPAAPKPKREENPQKLA 367
P T + P T ++ P+ T+ T T + T P P P P
Sbjct: 1532 TPPPTTTPSPPTTTPITPPT-STTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPT 1590
Query: 368 FMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYSGAVFEPERKKSAVTYLNSTMHPGTRK 427
+ T + T + P + P ++ T L T P
Sbjct: 1591 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTT-----PITPPTSTTTLPPTTTPS--- 1642
Query: 428 RGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT----------ETTFTFPAPVQPVSLP 477
PP TP+ P ++ P P T T T P ++ P
Sbjct: 1643 ---PPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTP 1699
Query: 478 SPTST 482
SPT+T
Sbjct: 1700 SPTTT 1704
Score = 55.5 bits (132), Expect = 2e-07
Identities = 70/331 (21%), Positives = 97/331 (29%), Gaps = 25/331 (7%)
Query: 166 KAVLSTDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLT 225
K + + T + +S T P T T T P P PPP T
Sbjct: 1394 KCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTT 1453
Query: 226 PRPNFLPQVRPKPVAQNNIP-IAPAPPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPV 284
P P P P + P P+PP +P P T P T S + P+
Sbjct: 1454 PSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSP-----PTTTTTTPPPTTTPSPPTTTPI 1508
Query: 285 RVVNGQTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQT 344
T T P T+ P T + P T ++ P+ T+ T T
Sbjct: 1509 TPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPT-STTTLPPTTTPSPPPT 1567
Query: 345 ESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTANPVYS--- 401
+ T P P P P + T + T + P +
Sbjct: 1568 TTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPIT 1627
Query: 402 ----------GAVFEPERKKSAVTYLNSTMHPGTRKRGRPPKYNAVLGFGALTPTSPQSS 451
P + +T P T PP TP+SP ++
Sbjct: 1628 PPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT 1687
Query: 452 HPDSPENEKTETTFTFPAPVQPVSLPSPTST 482
P P TT T P+P S P T+T
Sbjct: 1688 TPSPP-----TTTMTTPSPTTTPSSPITTTT 1713
Score = 54.7 bits (130), Expect = 3e-07
Identities = 61/263 (23%), Positives = 79/263 (30%), Gaps = 24/263 (9%)
Query: 114 PNLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDV 173
P T S T T + TT + P T T P + PT +T S + T
Sbjct: 1466 PTTTPSPPTTTPSPPTTTPSPPTT---TTTTPPPTTTPSPPTTTPITPPASTTTLPPTTT 1522
Query: 174 QNTPVNLQTSSKVT---GPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNF 230
+ P T+ T P +T TL T P P PPP TP P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 231 LPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRPVMLTKFTPTTL----PTSQNSIHPVRV 286
P + P P P P T PTT PTS ++ P
Sbjct: 1583 TTTPSPPTITTTTPPPTTTPSPPTTTTTT--PPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640
Query: 287 VNGQTATI------------AKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVK 334
+ T T P +T+ P T + P T S P+ T
Sbjct: 1641 PSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPS 1700
Query: 335 SHTETDEKQTESRTITPPAAPKP 357
T T + T + P P
Sbjct: 1701 PTTTPSSPITTTTTPSSTTTPSP 1723
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 2158 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 2209
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 2210 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2269
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 2270 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 2329
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 2330 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2386
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 2387 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 2444
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 2445 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 2499
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 2500 TTTTTVTPTPTPTGTQTPTTT 2520
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 2434 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 2485
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 2486 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2545
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 2546 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 2605
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 2606 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2662
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 2663 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 2720
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 2721 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 2775
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 2776 TTTTTVTPTPTPTGTQTPTTT 2796
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 2710 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 2761
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 2762 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2821
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 2822 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 2881
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 2882 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2938
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 2939 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 2996
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 2997 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 3051
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 3052 TTTTTVTPTPTPTGTQTPTTT 3072
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 2986 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 3037
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 3038 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3097
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 3098 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3157
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 3158 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3214
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 3215 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3272
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 3273 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 3327
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 3328 TTTTTVTPTPTPTGTQTPTTT 3348
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 3262 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 3313
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 3314 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3373
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 3374 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3433
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 3434 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3490
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 3491 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3548
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 3549 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 3603
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 3604 TTTTTVTPTPTPTGTQTPTTT 3624
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 3538 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 3589
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 3590 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3649
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 3650 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3709
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 3710 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3766
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 3767 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3824
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 3825 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 3879
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 3880 TTTTTVTPTPTPTGTQTPTTT 3900
Score = 50.8 bits (120), Expect = 4e-06
Identities = 83/381 (21%), Positives = 117/381 (30%), Gaps = 33/381 (8%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 3814 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 3865
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFLPQ 233
P T + T P + T T Q PI + P P T P P
Sbjct: 3866 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 3925
Query: 234 VRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVVNG 289
V P P P+ + P TPTT P T+ ++ P G
Sbjct: 3926 TTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 3985
Query: 290 -QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQTE 345
QT T T P+ T++ T P T ++ + T + T T T
Sbjct: 3986 TQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4042
Query: 346 SRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVYSG 402
+ T+TP P P + P + + Q+ TT P +G
Sbjct: 4043 TTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTG 4100
Query: 403 AVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENEKT 461
+ T + T P GT + P + +TPT P + +P
Sbjct: 4101 TQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTTPI 4155
Query: 462 ETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 4156 TTTTTVTPTPTPTGTQTPTTT 4176
Score = 47.4 bits (111), Expect = 4e-05
Identities = 81/383 (21%), Positives = 118/383 (30%), Gaps = 25/383 (6%)
Query: 115 NLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQ 174
N+ + +M TT T T + V PT + +T V
Sbjct: 1872 NVQCCECVTQPTTMTTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 1931
Query: 175 NTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFI---PPPRLTPRPNFL 231
TP T + T P + T T Q PI + P P T P
Sbjct: 1932 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 1991
Query: 232 PQVRPKPVAQNNIPI---APAPPPMLAAPQLIQRPVMLTKFTPTTLP-TSQNSIHPVRVV 287
P V P P P+ + P TPTT P T+ ++ P
Sbjct: 1992 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTP 2051
Query: 288 NG-QTATIAKTFPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQT---VKSHTETDEKQ 343
G QT T T P+ T++ T P T ++ + T + T T
Sbjct: 2052 TGTQTPT---TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPI 2108
Query: 344 TESRTITPPAAPKPKREENPQKLAFMVSLGLVTHDHLEEIQSKRQERKRRTTA---NPVY 400
T + T+TP P P + P + + Q+ TT P
Sbjct: 2109 TTTTTVTP--TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTP 2166
Query: 401 SGAVFEPERKKSAVTYLNSTMHP-GTRKRGRPPKYNAVLGFGALTPTSPQSSHPDSPENE 459
+G + T + T P GT + P + +TPT P + +P
Sbjct: 2167 TGTQTPTTTPITTTTTVTPTPTPTGT----QTPTTTPITTTTTVTPT-PTPTGTQTPTTT 2221
Query: 460 KTETTFTFPAPVQPVSLPSPTST 482
TT T P +PT+T
Sbjct: 2222 PITTTTTVTPTPTPTGTQTPTTT 2244
Score = 41.6 bits (96), Expect = 0.002
Identities = 59/243 (24%), Positives = 78/243 (32%), Gaps = 23/243 (9%)
Query: 117 TASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLSTDVQNT 176
T T T T T P+ P Q PT +T +T V T
Sbjct: 4090 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT--------TTTVTPT 4141
Query: 177 PVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPNFLPQVRP 236
P T + T P + T T Q PI + P TP P Q P
Sbjct: 4142 PTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTP---TPTPTG-TQTGP 4197
Query: 237 KPVAQNNIPIAPA----PPPMLAAPQLIQRPVMLTKFTPTTLPTSQNSIHPVRVVNGQTA 292
P + PIA PPP + PQ + + T L T +I T
Sbjct: 4198 -PTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTP 4256
Query: 293 TIAKT----FPMAQLTSIVIATPGTRLAGPQTVQLSKPSLEKQTVKSHTETDEKQTESRT 348
T T ++ S + PGT G T S P+ TV++ T + T +
Sbjct: 4257 TAPTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPT--PSTVQTTTTSAWTPTPTPL 4314
Query: 349 ITP 351
TP
Sbjct: 4315 STP 4317
Score = 32.3 bits (72), Expect = 1.5
Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 111 AASPNLTASQKTVTTASMITTKTLPLVLKAATATMPASVVGQRPTIAMVTAINSQKAVLS 170
+++P + S + T S TLP ++ + P++ PT S +
Sbjct: 4218 SSTPQTSRSTSSPLTESTTLLSTLPPAIEMTSTAPPSTPTA--PTTTSGGHTLSPPPSTT 4275
Query: 171 TDVQNTPVNLQTSSKVTGPGAEAVQIVAKNTVTLVQATPPQPIKVPQFIPPPRLTPRPN 229
T TP T+ + P VQ T T P P+ P I L P P+
Sbjct: 4276 TSPPGTPTRGTTTGSSSAPTPSTVQ----TTTTSAWTPTPTPLSTPSIIRTTGLRPYPS 4330
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.125 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,089,386
Number of Sequences: 37866
Number of extensions: 1600473
Number of successful extensions: 16354
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 243
Number of HSP's successfully gapped in prelim test: 782
Number of HSP's that attempted gapping in prelim test: 10581
Number of HSP's gapped (non-prelim): 4520
length of query: 680
length of database: 18,247,518
effective HSP length: 109
effective length of query: 571
effective length of database: 14,120,124
effective search space: 8062590804
effective search space used: 8062590804
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.