PARP1 5964

Name: PARP1	Sequence: fasta or formatted (1014aa)		NCBI GI: 156523968
Description: poly (ADP-ribose) polymerase family, member 1		Referenced in: DNases, Recombination, and DNA Repair polyADP-Ribose Polymerase Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 67 2 C cysteine 1.4 14 1 D aspartate 6.1 62 2 E glutamate 7.4 75 2 F phenylalanine 3.0 30 1 G glycine 7.0 71 2 H histidine 1.9 19 1 I isoleucine 4.7 48 2 K lysine 12.4 126 3 L leucine 8.9 90 2 M methionine 2.5 25 1 N asparagine 3.6 36 2 P proline 4.3 44 3 Q glutamine 3.4 34 2 R arginine 3.3 33 2 S serine 8.4 85 2 T threonine 4.1 42 2 V valine 6.7 68 2 W tryptophan 1.3 13 1 Y tyrosine 3.2 32 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly (ADP-ribose) polymerase family, member 1 [Homo... PARP2 0.180 poly (ADP-ribose) polymerase family, member 2 isofo... PARP2 0.180 poly (ADP-ribose) polymerase family, member 2 isofo... PARP3 0.109 poly (ADP-ribose) polymerase family, member 3 isofo... PARP3 0.109 poly (ADP-ribose) polymerase family, member 3 isofo... PARP4 0.044 poly (ADP-ribose) polymerase family, member 4 [Homo... LIG3 0.014 ligase III, DNA, ATP-dependent isoform beta precurso... LIG3 0.014 ligase III, DNA, ATP-dependent isoform alpha precurs... TNKS 0.010 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... TOPBP1 0.009 topoisomerase (DNA) II binding protein 1 TNKS2 0.007 tankyrase, TRF1-interacting ankyrin-related ADP-ribo... KIN 0.007 HsKin17 protein RFC1 0.007 replication factor C large subunit CHAF1A 0.007 chromatin assembly factor 1, subunit A (p150) BRD4 0.006 bromodomain-containing protein 4 isoform short BRD4 0.006 bromodomain-containing protein 4 isoform long ERC1 0.006 RAB6-interacting protein 2 isoform epsilon ERC1 0.006 RAB6-interacting protein 2 isoform delta NEB 0.006 nebulin PARP6 0.006 poly (ADP-ribose) polymerase family, member 6 PARP8 0.005 poly (ADP-ribose) polymerase family, member 8 LOC644129 0.005 PREDICTED: similar to hCG1647425 SPC25 0.005 spindle pole body component 25 PMFBP1 0.005 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.005 polyamine modulated factor 1 binding protein 1 isof... RSF1 0.005 remodeling and spacing factor 1 GLE1 0.004 GLE1 RNA export mediator homolog isoform 1 GLE1 0.004 GLE1 RNA export mediator homolog isoform 2 LDB3 0.004 LIM domain binding 3 isoform 4 LDB3 0.004 LIM domain binding 3 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.