LIG3 35384

Name: LIG3	Sequence: fasta or formatted (949aa)		NCBI GI: 73747844
Description: ligase III, DNA, ATP-dependent isoform beta precursor		Referenced in: DNases, Recombination, and DNA Repair polyADP-Ribose Polymerase Family Replication Proteins
Other entries for this name: alt prot [1009aa] ligase III, DNA, ATP-dependent isoform alpha precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 69 2 C cysteine 2.5 24 1 D aspartate 6.0 57 2 E glutamate 6.0 57 2 F phenylalanine 4.4 42 2 G glycine 6.4 61 2 H histidine 2.4 23 2 I isoleucine 3.8 36 2 K lysine 10.2 97 3 L leucine 8.6 82 3 M methionine 2.5 24 2 N asparagine 3.3 31 2 P proline 5.2 49 2 Q glutamine 3.8 36 3 R arginine 5.5 52 2 S serine 7.8 74 3 T threonine 5.0 47 3 V valine 6.3 60 2 W tryptophan 0.9 9 1 Y tyrosine 2.0 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ligase III, DNA, ATP-dependent isoform beta precurso... LIG3 0.982 ligase III, DNA, ATP-dependent isoform alpha precurs... LIG1 0.079 DNA ligase I LIG4 0.067 DNA ligase IV LIG4 0.067 DNA ligase IV LIG4 0.067 DNA ligase IV PARP1 0.015 poly (ADP-ribose) polymerase family, member 1 [Homo... NOLC1 0.007 nucleolar and coiled-body phosphoprotein 1 CHD1 0.006 chromodomain helicase DNA binding protein 1 PALLD 0.006 palladin CEP110 0.006 centrosomal protein 110kDa FAM133A 0.006 hypothetical protein LOC286499 HIST1H1C 0.005 histone cluster 1, H1c RNF10 0.005 ring finger protein 10 HMGN1 0.005 high-mobility group nucleosome binding domain 1 [Hom... TCEAL4 0.005 transcription elongation factor A (SII)-like 4 [Homo... TCEAL4 0.005 transcription elongation factor A (SII)-like 4 [Homo... TCEAL4 0.005 transcription elongation factor A (SII)-like 4 [Homo... TCEAL4 0.005 transcription elongation factor A (SII)-like 4 [Homo... C6orf174 0.004 hypothetical protein LOC387104 LOC100132992 0.004 PREDICTED: similar to hCG1979072 LOC100132992 0.004 PREDICTED: similar to hCG1979072 LOC100132992 0.004 PREDICTED: similar to hCG1979072 CACNA1F 0.004 calcium channel, voltage-dependent, L type, alpha 1F... HIST1H1A 0.004 histone cluster 1, H1a FGA 0.004 fibrinogen, alpha polypeptide isoform alpha prepropr... FGA 0.004 fibrinogen, alpha polypeptide isoform alpha-E preprop... LOC643446 0.004 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.004 PREDICTED: similar to ribonucleic acid binding prot... LOC643446 0.004 PREDICTED: similar to ribonucleic acid binding prot... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.