Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PARP2 Sequence: fasta or formatted (583aa) NCBI GI: 110825961
Description:

poly (ADP-ribose) polymerase family, member 2 isoform 1

Referenced in:

polyADP-Ribose Polymerase Family

Other entries for this name:
alt prot [570aa] poly (ADP-ribose) polymerase family, member 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         40           2
 C cysteine            1.7         10           1
 D aspartate           4.6         27           2
 E glutamate           7.5         44           3
 F phenylalanine       2.7         16           1
 G glycine             6.7         39           3
 H histidine           2.6         15           1
 I isoleucine          3.4         20           1
 K lysine              8.9         52           2
 L leucine            10.8         63           4
 M methionine          3.6         21           3
 N asparagine          5.8         34           3
 P proline             4.5         26           2
 Q glutamine           4.8         28           1
 R arginine            5.5         32           4
 S serine              6.0         35           2
 T threonine           4.6         27           1
 V valine              4.5         26           1
 W tryptophan          1.2          7           1
 Y tyrosine            3.6         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 2 isofo... 
PARP2                 0.969   poly (ADP-ribose) polymerase family, member 2 isofo...
PARP1                 0.311   poly (ADP-ribose) polymerase family, member 1 [Homo...
PARP3                 0.207   poly (ADP-ribose) polymerase family, member 3 isofo...
PARP3                 0.207   poly (ADP-ribose) polymerase family, member 3 isofo...
PARP4                 0.067   poly (ADP-ribose) polymerase family, member 4 [Homo...
TNKS                  0.016   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PARP8                 0.014   poly (ADP-ribose) polymerase family, member 8 
TNKS2                 0.013   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PARP6                 0.012   poly (ADP-ribose) polymerase family, member 6 
MYO10                 0.011   myosin X 
KIF20B                0.009   M-phase phosphoprotein 1 
ARID4B                0.009   AT rich interactive domain 4B isoform 2 
ARID4B                0.009   AT rich interactive domain 4B isoform 1 
DDX46                 0.009   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
RBBP6                 0.008   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.008   retinoblastoma-binding protein 6 isoform 1 
KIF27                 0.008   kinesin family member 27 
SFRS4                 0.007   splicing factor, arginine/serine-rich 4 
WDR87                 0.007   NYD-SP11 protein 
KDM5A                 0.007   retinoblastoma binding protein 2 isoform 1 
KDM5A                 0.007   retinoblastoma binding protein 2 isoform 2 
LOC100292370          0.007   PREDICTED: hypothetical protein 
KIAA0368              0.006   KIAA0368 protein 
CDK5RAP2              0.006   CDK5 regulatory subunit associated protein 2 isoform...
PARP11                0.006   poly (ADP-ribose) polymerase family, member 11 [Hom...
OSBP                  0.006   oxysterol binding protein 
TIPARP                0.006   TCDD-inducible poly(ADP-ribose) polymerase 
THUMPD1               0.006   THUMP domain containing 1 
CDK5RAP2              0.005   CDK5 regulatory subunit associated protein 2 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press