Guide to the Human Genome
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Name: KIN Sequence: fasta or formatted (393aa) NCBI GI: 13124883
Description:

HsKin17 protein

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         16           1
 C cysteine            1.8          7           1
 D aspartate           4.8         19           2
 E glutamate          10.7         42           3
 F phenylalanine       3.1         12           1
 G glycine             5.9         23           2
 H histidine           2.0          8           1
 I isoleucine          6.6         26           2
 K lysine             12.2         48           5
 L leucine             7.9         31           3
 M methionine          1.8          7           1
 N asparagine          3.3         13           2
 P proline             2.5         10           1
 Q glutamine           4.8         19           2
 R arginine            6.1         24           3
 S serine              7.6         30           3
 T threonine           6.6         26           1
 V valine              4.1         16           2
 W tryptophan          1.3          5           1
 Y tyrosine            2.8         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HsKin17 protein 
GPKOW                 0.026   G patch domain and KOW motifs 
SFRS12                0.026   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.026   splicing factor, arginine/serine-rich 12 isoform b [...
ARL6IP4               0.024   SRp25 nuclear protein isoform 1 
FAM133A               0.022   hypothetical protein LOC286499 
CALD1                 0.021   caldesmon 1 isoform 1 
SETD1A                0.020   SET domain containing 1A 
FLJ44817              0.020   similar to pleckstrin homology domain protein (5V32...
ARID4A                0.020   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.020   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.020   retinoblastoma-binding protein 1 isoform I 
PARP1                 0.018   poly (ADP-ribose) polymerase family, member 1 [Homo...
SFRS18                0.018   splicing factor, arginine/serine-rich 130 
SFRS18                0.018   splicing factor, arginine/serine-rich 130 
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
ARL6IP4               0.018   SRp25 nuclear protein isoform 3 
RNPS1                 0.018   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.018   RNA-binding protein S1, serine-rich domain 
LOC440243             0.018   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prote...
LOC283767             0.017   golgi autoantigen, golgin subfamily a-like 
CAST                  0.017   calpastatin isoform h 
CAST                  0.017   calpastatin isoform e 
KIF21A                0.017   kinesin family member 21A 
LETM1                 0.016   leucine zipper-EF-hand containing transmembrane prote...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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