Guide to the Human Genome
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Name: PARP3 Sequence: fasta or formatted (533aa) NCBI GI: 158634482
Description:

poly (ADP-ribose) polymerase family, member 3 isoform b

Referenced in:

polyADP-Ribose Polymerase Family

Other entries for this name:
alt prot [540aa] poly (ADP-ribose) polymerase family, member 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         32           2
 C cysteine            1.7          9           1
 D aspartate           4.5         24           1
 E glutamate           8.4         45           2
 F phenylalanine       3.6         19           2
 G glycine             6.6         35           2
 H histidine           3.6         19           2
 I isoleucine          4.3         23           2
 K lysine              7.1         38           3
 L leucine             9.0         48           2
 M methionine          1.9         10           1
 N asparagine          4.5         24           4
 P proline             6.6         35           3
 Q glutamine           6.6         35           2
 R arginine            4.5         24           1
 S serine              6.0         32           3
 T threonine           5.3         28           1
 V valine              6.2         33           3
 W tryptophan          1.1          6           1
 Y tyrosine            2.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) polymerase family, member 3 isofo... 
PARP3                 1.000   poly (ADP-ribose) polymerase family, member 3 isofo...
PARP2                 0.225   poly (ADP-ribose) polymerase family, member 2 isofo...
PARP2                 0.225   poly (ADP-ribose) polymerase family, member 2 isofo...
PARP1                 0.205   poly (ADP-ribose) polymerase family, member 1 [Homo...
PARP4                 0.051   poly (ADP-ribose) polymerase family, member 4 [Homo...
ZC3HAV1               0.015   zinc finger antiviral protein isoform 1 
PARP15                0.015   poly (ADP-ribose) polymerase family, member 15 isofo...
PARP15                0.015   poly (ADP-ribose) polymerase family, member 15 isof...
TNKS                  0.014   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
PARP14                0.014   poly (ADP-ribose) polymerase family, member 14 [Hom...
TNKS2                 0.013   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
BPHL                  0.009   biphenyl hydrolase-like 
PARP6                 0.009   poly (ADP-ribose) polymerase family, member 6 
PARP11                0.008   poly (ADP-ribose) polymerase family, member 11 [Hom...
TXLNB                 0.007   taxilin beta 
KERA                  0.007   keratocan 
PARP8                 0.007   poly (ADP-ribose) polymerase family, member 8 
XYLT2                 0.005   xylosyltransferase II 
CENPF                 0.005   centromere protein F 
SCLY                  0.005   selenocysteine lyase 
OSBPL5                0.005   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.005   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.005   oxysterol-binding protein-like protein 5 isoform b [...
PRDM10                0.005   PR domain containing 10 isoform 2 
PRDM10                0.005   PR domain containing 10 isoform 4 
PRDM10                0.005   PR domain containing 10 isoform 1 
PRDM10                0.005   PR domain containing 10 isoform 3 
RASAL1                0.005   RAS protein activator like 1 
SOX3                  0.005   SRY (sex determining region Y)-box 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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