Guide to the Human Genome
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Name: MYO1D Sequence: fasta or formatted (1006aa) NCBI GI: 51100974
Description:

myosin ID

Referenced in:

Left-Right Axis
Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         59           2
 C cysteine            1.4         14           1
 D aspartate           5.3         53           2
 E glutamate           6.1         61           2
 F phenylalanine       5.2         52           1
 G glycine             5.1         51           2
 H histidine           2.6         26           1
 I isoleucine          6.8         68           2
 K lysine              8.5         86           2
 L leucine             8.6         87           2
 M methionine          2.4         24           1
 N asparagine          5.1         51           2
 P proline             3.4         34           2
 Q glutamine           4.4         44           2
 R arginine            6.7         67           2
 S serine              5.6         56           2
 T threonine           4.8         48           2
 V valine              7.5         75           3
 W tryptophan          0.8          8           1
 Y tyrosine            4.2         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin ID 
MYO1G                 0.610   myosin IG 
MYO1B                 0.347   myosin IB isoform 2 
MYO1B                 0.341   myosin IB isoform 1 
MYO1B                 0.341   myosin IB isoform 1 
MYO1C                 0.337   myosin IC isoform b 
MYO1C                 0.337   myosin IC isoform a 
MYO1C                 0.337   myosin IC isoform c 
MYO1A                 0.334   myosin IA 
MYO1H                 0.322   myosin 1H 
MYO1E                 0.271   myosin IE 
MYO1F                 0.258   myosin IF 
MYO7A                 0.227   myosin VIIA isoform 2 
MYO7A                 0.227   myosin VIIA isoform 3 
MYO7A                 0.227   myosin VIIA isoform 1 
MYO5A                 0.224   myosin VA isoform 2 
MYO5A                 0.224   myosin VA isoform 1 
MYO5C                 0.223   myosin VC 
MYO15A                0.218   myosin XV 
MYO7B                 0.214   myosin VIIB 
MYO5B                 0.213   myosin VB 
MYH7                  0.208   myosin, heavy chain 7, cardiac muscle, beta 
MYH10                 0.208   myosin, heavy polypeptide 10, non-muscle 
MYH7B                 0.208   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH11                 0.206   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.206   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH3                  0.204   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH11                 0.204   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.204   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH8                  0.203   myosin, heavy chain 8, skeletal muscle, perinatal [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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