Guide to the Human Genome
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Name: MYO3B Sequence: fasta or formatted (1341aa) NCBI GI: 134288892
Description:

myosin IIIB isoform 2

Referenced in:

Myosin

Other entries for this name:
alt prot [1314aa] myosin IIIB isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         87           2
 C cysteine            1.9         25           1
 D aspartate           4.9         66           2
 E glutamate           6.4         86           2
 F phenylalanine       4.0         53           2
 G glycine             6.3         84           3
 H histidine           3.8         51           2
 I isoleucine          5.4         73           2
 K lysine              5.8         78           2
 L leucine             9.8        131           3
 M methionine          1.8         24           2
 N asparagine          4.6         62           2
 P proline             4.5         60           3
 Q glutamine           5.3         71           2
 R arginine            6.1         82           3
 S serine              7.3         98           4
 T threonine           4.7         63           2
 V valine              6.3         85           4
 W tryptophan          0.8         11           1
 Y tyrosine            3.8         51           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin IIIB isoform 2 
MYO3B                 0.974   myosin IIIB isoform 1 
MYO3A                 0.536   myosin IIIA 
MYO7B                 0.184   myosin VIIB 
MYO7A                 0.179   myosin VIIA isoform 2 
MYO7A                 0.179   myosin VIIA isoform 3 
MYO7A                 0.179   myosin VIIA isoform 1 
MYO15A                0.170   myosin XV 
MYO10                 0.167   myosin X 
MYO16                 0.155   myosin heavy chain Myr 8 
MYO5C                 0.153   myosin VC 
MYO5A                 0.151   myosin VA isoform 2 
MYO5A                 0.151   myosin VA isoform 1 
MYO5B                 0.146   myosin VB 
MYO9A                 0.145   myosin IXA 
MYH9                  0.145   myosin, heavy polypeptide 9, non-muscle 
MYH11                 0.142   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.142   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYO1C                 0.141   myosin IC isoform b 
MYO1C                 0.141   myosin IC isoform a 
MYO1C                 0.141   myosin IC isoform c 
MYH10                 0.141   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.141   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.141   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYO9B                 0.141   myosin IXB isoform 2 
MYO9B                 0.141   myosin IXB isoform 1 
MYH7                  0.140   myosin, heavy chain 7, cardiac muscle, beta 
MYH6                  0.139   myosin heavy chain 6 
MYH14                 0.139   myosin, heavy chain 14 isoform 3 
MYH7B                 0.139   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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