Guide to the Human Genome
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Name: MYO3A Sequence: fasta or formatted (1616aa) NCBI GI: 145275208
Description:

myosin IIIA

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         89           2
 C cysteine            1.6         26           1
 D aspartate           4.1         67           2
 E glutamate           8.5        137           3
 F phenylalanine       3.7         59           1
 G glycine             4.5         73           2
 H histidine           2.5         41           2
 I isoleucine          6.3        102           3
 K lysine              8.7        140           3
 L leucine             9.3        151           3
 M methionine          1.7         28           1
 N asparagine          5.7         92           2
 P proline             4.0         65           3
 Q glutamine           5.1         83           2
 R arginine            6.1         99           3
 S serine              7.1        114           2
 T threonine           5.5         89           2
 V valine              5.1         83           2
 W tryptophan          0.7         12           1
 Y tyrosine            4.1         66           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin IIIA 
MYO3B                 0.449   myosin IIIB isoform 2 
MYO3B                 0.444   myosin IIIB isoform 1 
MYO7A                 0.150   myosin VIIA isoform 2 
MYO7A                 0.150   myosin VIIA isoform 3 
MYO7A                 0.150   myosin VIIA isoform 1 
MYO7B                 0.145   myosin VIIB 
MYO15A                0.140   myosin XV 
MYO10                 0.139   myosin X 
MYO16                 0.130   myosin heavy chain Myr 8 
MYO5C                 0.126   myosin VC 
MYH6                  0.125   myosin heavy chain 6 
MYH7                  0.124   myosin, heavy chain 7, cardiac muscle, beta 
MYH3                  0.122   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYO5B                 0.122   myosin VB 
MYO5A                 0.121   myosin VA isoform 2 
MYO5A                 0.121   myosin VA isoform 1 
MYH9                  0.120   myosin, heavy polypeptide 9, non-muscle 
MYO9A                 0.120   myosin IXA 
MYH1                  0.120   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH2                  0.120   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.120   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYO1C                 0.120   myosin IC isoform b 
MYO1C                 0.120   myosin IC isoform a 
MYO1C                 0.120   myosin IC isoform c 
MYH15                 0.119   myosin, heavy polypeptide 15 
MYH11                 0.119   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.119   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYO1B                 0.118   myosin IB isoform 1 
MYO1B                 0.118   myosin IB isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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