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Search of human proteins with 154448882
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154448882 proline rich 4 (lacrimal) isoform 1 [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154448882 proline rich 4 (lacrimal) isoform 1 [Homo sapiens] 324 1e-89
gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens] 252 7e-68
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 73 7e-14
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 71 3e-13
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 71 3e-13
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 57 7e-09
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 51 3e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 49 2e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 48 3e-06
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 46 1e-05
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 45 2e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 44 6e-05
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 44 6e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 44 6e-05
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 43 1e-04
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens] 42 1e-04
gi|4758666 LATS homolog 1 [Homo sapiens] 42 2e-04
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 42 2e-04
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 42 2e-04
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 42 2e-04
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 42 2e-04
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 41 4e-04
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 40 5e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 7e-04
gi|19924099 synapsin I isoform Ia [Homo sapiens] 40 0.001
gi|19924097 synapsin I isoform Ib [Homo sapiens] 40 0.001
gi|56549694 enabled homolog isoform a [Homo sapiens] 39 0.001
gi|39930375 enabled homolog isoform b [Homo sapiens] 39 0.001
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 39 0.001
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 39 0.001
>gi|154448882 proline rich 4 (lacrimal) isoform 1 [Homo sapiens]
Length = 147
Score = 324 bits (831), Expect = 1e-89
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MWRGIDSIYPYELLQKNILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQ 60
MWRGIDSIYPYELLQKNILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQ
Sbjct: 1 MWRGIDSIYPYELLQKNILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQ 60
Query: 61 RPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRF 120
RPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRF
Sbjct: 61 RPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRF 120
Query: 121 PSVSLQEASSFFQRDRPARHPQEQPLW 147
PSVSLQEASSFFQRDRPARHPQEQPLW
Sbjct: 121 PSVSLQEASSFFQRDRPARHPQEQPLW 147
>gi|154448886 proline rich 4 (lacrimal) isoform 2 [Homo sapiens]
Length = 134
Score = 252 bits (644), Expect = 7e-68
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 35 DVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHR 94
DVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHR
Sbjct: 22 DVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHR 81
Query: 95 HPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPLW 147
HPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPLW
Sbjct: 82 HPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPLW 134
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 73.2 bits (178), Expect = 7e-14
Identities = 38/94 (40%), Positives = 48/94 (51%)
Query: 18 ILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGN 77
+L S ++ DV+ ED I D DS Q D+ Q PP G +P GN
Sbjct: 5 LLSVALLAFSSAQDLNEDVSQEDVPLVISDGGDSEQFLDEERQGPPLGGQQSQPSAGDGN 64
Query: 78 QDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
QDDGPQQ PP+ GG + PPPP Q PP++G
Sbjct: 65 QDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG 98
Score = 55.1 bits (131), Expect = 2e-08
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDD--GPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGH 112
P QG PPP+G PP G+ G Q PP+ GGH + PPPPP Q PP +G
Sbjct: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG 154
Query: 113 RQLSLPR 119
R P+
Sbjct: 155 RPQGPPQ 161
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 71.2 bits (173), Expect = 3e-13
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 18 ILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGN 77
+L S ++ DV+ ED I D DS Q D+ Q PP G +P GN
Sbjct: 5 LLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGN 64
Query: 78 QDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
Q+DGPQQ PP+ GG + PPPP Q PP++G
Sbjct: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG 98
Score = 55.1 bits (131), Expect = 2e-08
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDD--GPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGH 112
P QG PPP+G PP G+ G Q PP+ GGH + PPPPP Q PP +G
Sbjct: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG 154
Query: 113 RQLSLPR 119
R P+
Sbjct: 155 RPQGPPQ 161
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 71.2 bits (173), Expect = 3e-13
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 18 ILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGN 77
+L S ++ DV+ ED I D DS Q D+ Q PP G +P GN
Sbjct: 5 LLSVALLAFSSAQDLDEDVSQEDVPLVISDGGDSEQFIDEERQGPPLGGQQSQPSAGDGN 64
Query: 78 QDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
Q+DGPQQ PP+ GG + PPPP Q PP++G
Sbjct: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQG 98
Score = 55.1 bits (131), Expect = 2e-08
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDD--GPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGH 112
P QG PPP+G PP G+ G Q PP+ GGH + PPPPP Q PP +G
Sbjct: 95 PQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGG 154
Query: 113 RQLSLPR 119
R P+
Sbjct: 155 RPQGPPQ 161
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 56.6 bits (135), Expect = 7e-09
Identities = 37/103 (35%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 54 RPDQG---PQRPPPE-GLLPRPPGDSGNQDDGPQ------QRPPKPGGHHRH-PPPPPFQ 102
RP QG Q PPP G RPP GNQ G +RPP GG+ H PPPPP +
Sbjct: 81 RPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGK 140
Query: 103 NQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
++ PP+ G++ P P + R AR P +P
Sbjct: 141 PERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKP 183
Score = 55.8 bits (133), Expect = 1e-08
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 35 DVNYEDFTFTIPDVEDSSQRPDQG--PQRPPPEGLLPR-PPGDSGNQDDGP-------QQ 84
DV+ E+ F I + +RP G PQRPPP P+ PP GNQ GP +
Sbjct: 22 DVSQEESLFLISG-KPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEG 80
Query: 85 RPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFP 121
RPP+ G + PPP P + ++ PP+ G++ P P
Sbjct: 81 RPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPP 117
Score = 48.5 bits (114), Expect = 2e-06
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 53 QRPDQGPQRPPPEGLLPRPPGDSGNQD------DGPQQRPPKPGGHH-RHPPPPPFQNQQ 105
Q +Q PPP G RPP GNQ G +RPP GG+ + PPP P + +
Sbjct: 105 QGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEG 164
Query: 106 RPPRRGHRQLSL---PRFPSVSLQEASSFFQRDRPARHPQEQP 145
PP+ G++ S P P Q+ + Q P PQ P
Sbjct: 165 PPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPP 207
Score = 43.5 bits (101), Expect = 6e-05
Identities = 26/62 (41%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 53 QRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGH 112
Q+ PQ PPP G PP GN PQQ P G + PPPPP RPPR
Sbjct: 188 QQEGNKPQGPPPPGKPQGPPPAGGN----PQQPQAPPAGKPQGPPPPP--QGGRPPRPAQ 241
Query: 113 RQ 114
Q
Sbjct: 242 GQ 243
Score = 30.4 bits (67), Expect = 0.55
Identities = 26/103 (25%), Positives = 30/103 (29%), Gaps = 47/103 (45%)
Query: 53 QRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ----------------------------- 83
Q +Q + PPP G RPP GNQ GP
Sbjct: 126 QGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQG 185
Query: 84 ---------QRPPKP---------GGHHRHPPPPPFQNQQRPP 108
Q PP P GG+ + P PP Q PP
Sbjct: 186 PPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPP 228
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 51.2 bits (121), Expect = 3e-07
Identities = 37/95 (38%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKP------GGHHRHPPPPPFQNQQRPPRR 110
QGP PP G PP GN+ GP P KP G+ PPPP + Q PP
Sbjct: 216 QGP--PPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPG 273
Query: 111 GHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
G+ Q LP P+ Q Q RP R PQ QP
Sbjct: 274 GNPQQPLPP-PAGKPQGPPPPPQGGRPHRPPQGQP 307
Score = 49.7 bits (117), Expect = 9e-07
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 18 ILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQG--PQR-PPPEGLLPRPPGD 74
+L + S + DV+ E+ I + +RP G PQR PPP G P
Sbjct: 5 LLSVALLALSSAQSLNEDVSQEESPSVISG-KPEGRRPQGGNQPQRTPPPPGKPEGRPPQ 63
Query: 75 SGNQDDGPQQRPPKP-------GGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFP 121
GNQ GP RP KP G + PPP P + + +PP+ G++ P P
Sbjct: 64 GGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRP 117
Score = 47.4 bits (111), Expect = 4e-06
Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 54 RPDQG---PQRPPPEGLLPR-PPGDSGNQDDGPQQRPPKP-------GGHHRHPPPPPFQ 102
RP QG Q PPP P PP GNQ GP RP KP G + PPP P +
Sbjct: 60 RPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGK 119
Query: 103 NQQRPPRRGHRQLSLPRFP 121
+ PP+ G++ P P
Sbjct: 120 PEGPPPQGGNQSQGPPPRP 138
Score = 46.6 bits (109), Expect = 7e-06
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKP-------GGHHRHPPPPPFQNQQRPPR 109
QGP PP G PP GNQ GP RP KP G + PPP P + + PP+
Sbjct: 111 QGP--PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 168
Query: 110 RGHRQLSLPRFP 121
G++ P P
Sbjct: 169 GGNQSQGPPPHP 180
Score = 45.8 bits (107), Expect = 1e-05
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKP-------GGHHRHPPPPPFQNQQRPPR 109
QGP PP G PP GNQ GP RP KP G + PPP P + + PP+
Sbjct: 132 QGP--PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQ 189
Query: 110 RGHRQLSLPRFP 121
G++ P P
Sbjct: 190 GGNQSQGPPPRP 201
Score = 44.3 bits (103), Expect = 4e-05
Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 12/99 (12%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKP-------GGHHRHPPPPPFQNQQRPPR 109
QGP PP G PP GNQ GP RP KP G + PPP P + + P +
Sbjct: 174 QGP--PPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQ 231
Query: 110 RGHRQLSLPRFPSVSL---QEASSFFQRDRPARHPQEQP 145
G++ P P + + QR P PQ P
Sbjct: 232 GGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPP 270
Score = 43.9 bits (102), Expect = 5e-05
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKP-------GGHHRHPPPPPFQNQQRPPR 109
QGP PP G PP GNQ GP P KP G + PPP P + + PP+
Sbjct: 153 QGP--PPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQ 210
Query: 110 RGHRQLSLPRFP 121
G++ P P
Sbjct: 211 GGNQSQGPPPRP 222
Score = 43.5 bits (101), Expect = 6e-05
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 19/82 (23%)
Query: 59 PQRPPPEG------LLPRP------PGDSGNQDDGPQQRPPKP-------GGHHRHPPPP 99
P+ PPP+G PRP P GNQ GP RP KP G + PPP
Sbjct: 78 PEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 137
Query: 100 PFQNQQRPPRRGHRQLSLPRFP 121
P + + PP+ G++ P P
Sbjct: 138 PGKPEGPPPQGGNQSQGPPPRP 159
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 48.9 bits (115), Expect = 2e-06
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQ 114
P PQ PPP+G R P + GP PP+ G + PPPPP + Q PP+ G+R
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQGP---PPQGGNQPQGPPPPPGKPQGPPPQGGNRP 129
Query: 115 LSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
P P Q + R R P +P
Sbjct: 130 QGPP--PPGKPQGPPPQGDKSRSPRSPPGKP 158
Score = 47.4 bits (111), Expect = 4e-06
Identities = 33/99 (33%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 55 PDQG---PQRPPPEGLLPRPP--GDSGNQDDGPQ---QRPPKPGGHHRHPPPPPFQNQQR 106
P QG PQ PPP G PP GD P Q PP GG+ PPPP Q
Sbjct: 183 PPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 242
Query: 107 PPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
PP +G + P P + + + AR P +P
Sbjct: 243 PPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKP 281
Score = 46.2 bits (108), Expect = 1e-05
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQ 114
P PQ PPP+G R P + GP PP+ G + PPPPP + Q PP+ G +
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKPQGP---PPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 115 LSLP 118
P
Sbjct: 191 QGPP 194
Score = 46.2 bits (108), Expect = 1e-05
Identities = 29/76 (38%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 47 DVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPP 100
D SSQ P PQ PPP+G GNQ GP Q PP GG+ PPPP
Sbjct: 207 DKSRSSQSPPGKPQGPPPQG---------GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 257
Query: 101 FQNQQRPPRRGHRQLS 116
+ Q P + G + S
Sbjct: 258 GKPQGPPAQGGSKSQS 273
Score = 44.7 bits (104), Expect = 3e-05
Identities = 31/81 (38%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 47 DVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPP 100
D S + P PQ PPP+G GNQ GP Q PP GG+ PPPP
Sbjct: 85 DKSRSPRSPPGKPQGPPPQG---------GNQPQGPPPPPGKPQGPPPQGGNRPQGPPPP 135
Query: 101 FQNQQRPPRRGHRQLSLPRFP 121
Q PP +G + S PR P
Sbjct: 136 -GKPQGPPPQGDKSRS-PRSP 154
Score = 44.3 bits (103), Expect = 4e-05
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQ-----QRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
QGP PPP G PP GN+ GP Q PP G R P PP + Q PP+ G
Sbjct: 48 QGP--PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 105
Query: 112 HRQLSLPRFP 121
++ P P
Sbjct: 106 NQPQGPPPPP 115
Score = 44.3 bits (103), Expect = 4e-05
Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 55 PDQG---PQRPPPEGLLPRPP--GD---SGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQR 106
P QG PQ PPP G PP GD S G Q PP GG+ PPPP Q
Sbjct: 122 PPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 181
Query: 107 PPRRGHRQLSLPRFP 121
PP +G ++ P P
Sbjct: 182 PPPQGGKKPQGPPPP 196
Score = 42.4 bits (98), Expect = 1e-04
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 47 DVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPP 100
D S + P PQ PPP+G GNQ GP Q PP GG PPPP
Sbjct: 146 DKSRSPRSPPGKPQGPPPQG---------GNQPQGPPPPPGKPQGPPPQGGKKPQGPPPP 196
Query: 101 FQNQQRPPR 109
+ Q PP+
Sbjct: 197 GKPQGPPPQ 205
Score = 40.4 bits (93), Expect = 5e-04
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 21/76 (27%)
Query: 55 PDQG---PQRPPPEGLLPRPPGDSGNQD------------------DGPQQRPPKPGGHH 93
P QG PQ PPP G PP G++ + PQ PP GG+
Sbjct: 244 PPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 303
Query: 94 RHPPPPPFQNQQRPPR 109
+ P PP Q PPR
Sbjct: 304 QQPQAPPAGQPQGPPR 319
Score = 37.4 bits (85), Expect = 0.005
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 17/79 (21%)
Query: 49 EDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ------QRPPKPGGHHRHPPPPPFQ 102
E+S PQ P P+G GN+ GP Q PP GG+ PPPP
Sbjct: 26 EESPSLIAGNPQGPSPQG---------GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPP-G 75
Query: 103 NQQRPPRRGHRQLSLPRFP 121
Q PP +G + S PR P
Sbjct: 76 KPQGPPPQGDKSRS-PRSP 93
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 51 SSQRPDQGPQRPPP-EGLLPR--PPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ-QR 106
S++ P PQ PP EG P+ PP GN PQQ P G + PP PP + R
Sbjct: 273 SARSPPGKPQGPPQQEGNNPQGPPPPAGGN----PQQPQAPPAGQPQGPPRPPQGGRPSR 328
Query: 107 PPR 109
PP+
Sbjct: 329 PPQ 331
Score = 32.3 bits (72), Expect = 0.15
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 82 PQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHP 141
PQ P+ G + PPPPP + Q PP+ G++ P P Q + R R P
Sbjct: 36 PQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPP--PPGKPQGPPPQGDKSRSPRSP 93
Query: 142 QEQP 145
+P
Sbjct: 94 PGKP 97
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 48.1 bits (113), Expect = 3e-06
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 55 PDQG---PQRPPPEGLLPRPPGDSGNQDDG-------PQQRPPKPGGHHRHPPPPPFQNQ 104
P QG PQ PPP G PP G++ PQ PP+ G + PPPPP + Q
Sbjct: 267 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 326
Query: 105 QRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
PP+ G++ P P + R AR P +P
Sbjct: 327 GPPPQGGNKPQGPPP-PGKPQGPPPQGGSKSRSARSPPGKP 366
Score = 47.0 bits (110), Expect = 6e-06
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQ 114
P PQ PPP+G R P + GP PP+ G + PPPPP + Q PP+ G++
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQGP---PPQGGNQPQGPPPPPGKPQGPPPQGGNKP 150
Query: 115 LSLP 118
P
Sbjct: 151 QGPP 154
Score = 47.0 bits (110), Expect = 6e-06
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 55 PDQG---PQRPPPEGLLPRPPGDSGNQDDG-------PQQRPPKPGGHHRHPPPPPFQNQ 104
P QG PQ PPP G PP N+ PQ PP+ G + PPPPP + Q
Sbjct: 205 PPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 264
Query: 105 QRPPRRGHRQLSLP 118
PP+ G++ P
Sbjct: 265 GPPPQGGNKPQGPP 278
Score = 47.0 bits (110), Expect = 6e-06
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
Query: 51 SSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPPFQNQ 104
SS+ P PQ PPP+G GNQ GP Q PP GG+ PPPP + Q
Sbjct: 296 SSRSPPGKPQGPPPQG---------GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 346
Query: 105 QRPPRRGHRQLS 116
PP+ G + S
Sbjct: 347 GPPPQGGSKSRS 358
Score = 46.2 bits (108), Expect = 1e-05
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 55 PDQG---PQRPPPEGLLPRPPGDSGNQDDG-------PQQRPPKPGGHHRHPPPPPFQNQ 104
P QG PQ PPP G PP N+ PQ PP+ G + PPPPP + Q
Sbjct: 143 PPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 202
Query: 105 QRPPRRGHRQLSLP 118
PP+ G++ P
Sbjct: 203 GPPPQGGNKPQGPP 216
Score = 45.8 bits (107), Expect = 1e-05
Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
Query: 51 SSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ------QRPPKPGGHHRHPPPPPFQNQ 104
S++ P PQ PPP+G GNQ GP Q PP GG+ PPPP + Q
Sbjct: 234 SARSPPGKPQGPPPQG---------GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 284
Query: 105 QRPPRRGHRQLS 116
PP+ G + S
Sbjct: 285 GPPPQGGSKSRS 296
Score = 44.3 bits (103), Expect = 4e-05
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQ-----QRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
QGP PPP G PP GN+ GP Q PP G R P PP + Q PP+ G
Sbjct: 69 QGP--PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 126
Query: 112 HRQLSLPRFP 121
++ P P
Sbjct: 127 NQPQGPPPPP 136
Score = 43.9 bits (102), Expect = 5e-05
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 47 DVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPP 100
D S + P PQ PPP+G GNQ GP Q PP GG+ PPPP
Sbjct: 106 DKSRSPRSPPGKPQGPPPQG---------GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 156
Query: 101 FQNQQRPPRRGHRQLS 116
+ Q PP+ ++ S
Sbjct: 157 GKPQGPPPQGDNKSRS 172
Score = 42.4 bits (98), Expect = 1e-04
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 24/100 (24%)
Query: 55 PDQG---PQRPPPEGLLPRPPGDSGNQDDGPQQRPPKP-------GGHHRHPPPPPFQNQ 104
P QG PQ PPP G PP G++ + P KP G + + PPPP N
Sbjct: 329 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNP 388
Query: 105 QRP--PRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQ 142
Q+P P G Q PR P Q RP+R PQ
Sbjct: 389 QQPQAPPAGQPQ-GPPRPP-----------QGGRPSRPPQ 416
Score = 42.0 bits (97), Expect = 2e-04
Identities = 32/102 (31%), Positives = 42/102 (41%), Gaps = 14/102 (13%)
Query: 49 EDSSQRPDQGPQRPPPEGLL-----PRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQN 103
E+S PQ PP+G P PPG PQ PP+ G + PPPPP +
Sbjct: 26 EESPSLIAGNPQGAPPQGGNKPQGPPSPPGK-------PQGPPPQGGNQPQGPPPPPGKP 78
Query: 104 QQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
Q PP+ G++ P P Q + R R P +P
Sbjct: 79 QGPPPQGGNKPQGPP--PPGKPQGPPPQGDKSRSPRSPPGKP 118
Score = 40.0 bits (92), Expect = 7e-04
Identities = 34/95 (35%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
Query: 51 SSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRR 110
SS+ P PQ PPP+G GNQ GP P P G + PPP Q PP
Sbjct: 172 SSRSPPGKPQGPPPQG---------GNQPQGP----PPPPGKPQGPPPQGGNKPQGPPPP 218
Query: 111 GHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
G Q P+ + S Q A S P PQ P
Sbjct: 219 GKPQGPPPQGDNKS-QSARS------PPGKPQGPP 246
Score = 38.5 bits (88), Expect = 0.002
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPPFQNQQRPPRR 110
QGP PPP G PP GN+ GP Q PP+ R PP + Q PP+
Sbjct: 130 QGP--PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQG 187
Query: 111 GHRQLSLPRFP 121
G++ P P
Sbjct: 188 GNQPQGPPPPP 198
Score = 37.4 bits (85), Expect = 0.005
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 18/76 (23%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPP-----------PPFQNQQ 105
QGP PPP G PP GN+ GP P KP G PPP PP + Q
Sbjct: 192 QGP--PPPPGKPQGPPPQGGNKPQGPPP-PGKPQG----PPPQGDNKSQSARSPPGKPQG 244
Query: 106 RPPRRGHRQLSLPRFP 121
PP+ G++ P P
Sbjct: 245 PPPQGGNQPQGPPPPP 260
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 51 SSQRPDQGPQRPPP-EGLLPR--PPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ-QR 106
S++ P PQ PP EG P+ PP GN PQQ P G + PP PP + R
Sbjct: 358 SARSPPGKPQGPPQQEGNNPQGPPPPAGGN----PQQPQAPPAGQPQGPPRPPQGGRPSR 413
Query: 107 PPR 109
PP+
Sbjct: 414 PPQ 416
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 46.2 bits (108), Expect = 1e-05
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 54 RPDQGPQRPPPEGLLP-----RPPGDSGNQDDGPQQRPPKPGGHHRHP----PPPPFQNQ 104
+P Q Q+PPP+ P +PP P Q PP+ HH H PPPP
Sbjct: 593 QPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPLMPM 652
Query: 105 QRPPRRGHRQLSLPRFPSVSLQ 126
+P R H Q + P+ S +Q
Sbjct: 653 SQPQFRPHVQTAQPQASSSRMQ 674
Score = 39.3 bits (90), Expect = 0.001
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 42 TFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPF 101
T T P+++ P P +P P+ +PP P Q PP+ +HPP P
Sbjct: 572 THTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPP 631
Query: 102 QNQQRPPRRGHRQLSLPRFPSVSLQE 127
Q+Q H LS+P P + + +
Sbjct: 632 QHQH---HHHHHHLSVPPPPLMPMSQ 654
Score = 33.9 bits (76), Expect = 0.050
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 50 DSSQRPDQGPQR-PPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPP 100
D P+ PQR P P + P+P G QQ P P G H H P PP
Sbjct: 998 DGFFHPEGQPQRLPQPPEVGPQPARKVTLTRGGLQQPPHLPAGPHAHSPVPP 1049
Score = 30.0 bits (66), Expect = 0.72
Identities = 27/79 (34%), Positives = 30/79 (37%), Gaps = 20/79 (25%)
Query: 51 SSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQR--PP 108
S RP GPQR P PP + PQ P PP P Q+Q R PP
Sbjct: 408 SQPRPAVGPQR------FPGPP-------EFPQHTPGPVPNSFSQPPRLPLQDQWRAPPP 454
Query: 109 RRGHRQLSL-----PRFPS 122
+ L PRFPS
Sbjct: 455 PQDRDPFFLGVSGEPRFPS 473
Score = 28.1 bits (61), Expect = 2.8
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 11/88 (12%)
Query: 59 PQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ-QRPPRRGHRQLSL 117
P PP + LP P Q P P G P PPP Q Q Q+P ++ Q
Sbjct: 553 PFIPPRQPFLPGP-----GQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQP 607
Query: 118 PRFPSVSLQEASSFFQRDRPARHPQEQP 145
P P Q P +HP + P
Sbjct: 608 PHQPPHQPPP-----QHQPPPQHPPQHP 630
Score = 26.6 bits (57), Expect = 8.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 78 QDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPR 109
+D P P +P + PPPPP QQ+P R
Sbjct: 302 KDHRPALLPTQPPVVPQAPPPPPPPPQQQPIR 333
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 45.1 bits (105), Expect = 2e-05
Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 23/108 (21%)
Query: 51 SSQRPDQGPQRPPPEGLLPRPPGDSG-------NQDDGPQQRPPKPGGHHRHPPPPPFQN 103
S P+ P PPP L P PP S N P Q PP PPPPP
Sbjct: 1951 SPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPP 2010
Query: 104 QQRPPRRGHRQ------LSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
PP Q L LP FPS+ +Q P +HP P
Sbjct: 2011 PPPPPPSAPPQVQLPVSLDLPLFPSIMMQ----------PVQHPALPP 2048
Score = 33.1 bits (74), Expect = 0.086
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 14/104 (13%)
Query: 44 TIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQN 103
T P E +++P Q PP +G P P S + D PP+ P P P +
Sbjct: 2357 TSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSD------PPQASTAQPQPQPQPPKQ 2410
Query: 104 QQ---RPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQ 144
Q RPP S PS LQ + + Q P + Q Q
Sbjct: 2411 PQLIGRPP-----SASQTPVPSSPLQISMTSLQNSLPPQLLQYQ 2449
Score = 26.6 bits (57), Expect = 8.0
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 71 PPGDSGNQDDGPQQRPPKPGGHHRHPPPP-----PFQNQQRPPRRGHRQLSLPRFPSVSL 125
P SG+ P PKP P P P Q+ PP +G + +LP S S
Sbjct: 2334 PAASSGSGTSTPLIPSPKPEPEKTSPKPEYPAEKPKQSDPSPPSQGTKP-ALP-LASTSS 2391
Query: 126 QEASSFFQRDRPARHPQEQP 145
+ + +P P +QP
Sbjct: 2392 DPPQASTAQPQPQPQPPKQP 2411
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 43.5 bits (101), Expect = 6e-05
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 58 GPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPP-PPPFQNQQRPP 108
GP + P+ +P PP Q PQQ PP+ H+ PP P P Q QQ PP
Sbjct: 50 GPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPP 101
Score = 41.6 bits (96), Expect = 2e-04
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 13/63 (20%)
Query: 45 IPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ 104
IP Q+ PQ+PPP+ +PP P Q PP P H + PPPP Q+
Sbjct: 60 IPPPPPHQQQQQPPPQQPPPQ----QPP---------PHQPPPHPQPHQQQQPPPPPQDS 106
Query: 105 QRP 107
+P
Sbjct: 107 SKP 109
Score = 35.0 bits (79), Expect = 0.023
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 55 PDQGPQRPPPEGLL----PRPPGDSGNQDDGPQQRPP-----KPGGHHRHPPPPPFQNQQ 105
P QGP P+G P+P G G G +PP +P G +H PP Q+ Q
Sbjct: 198 PKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQ 257
Query: 106 RPPRRG 111
PP G
Sbjct: 258 GPPPGG 263
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 14/77 (18%)
Query: 71 PPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQR--PPRRGHRQLSLPRFPSVSLQEA 128
PPG NQ+ GP P G PPPP QQ+ PP++ Q P P
Sbjct: 35 PPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPP------ 88
Query: 129 SSFFQRDRPARHPQEQP 145
P H Q+QP
Sbjct: 89 ------PHPQPHQQQQP 99
Score = 32.7 bits (73), Expect = 0.11
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 54 RPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQR-PPKPGGHHRHPPP 98
+P GP P G P+PP G + G +Q PP HH+ PPP
Sbjct: 217 KPGGGPGLSTPGGH-PKPPHRGGGEPRGGRQHHPPYHQQHHQGPPP 261
Score = 31.2 bits (69), Expect = 0.33
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Query: 61 RPPPEGL---LPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRR 110
R PP G+ R P G GP+ P P H + PPP QQ PP++
Sbjct: 32 RSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPP---QQPPPQQ 81
Score = 29.3 bits (64), Expect = 1.2
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 17/71 (23%)
Query: 55 PDQG-PQRPPPEGLLPRPPGDSGNQDDGPQQRP-------------PKPGGHHRHPPPPP 100
P G P PP G P PP GP+Q P PKPGG P
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTP-- 227
Query: 101 FQNQQRPPRRG 111
+PP RG
Sbjct: 228 -GGHPKPPHRG 237
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 43.5 bits (101), Expect = 6e-05
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQ-----QRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
QGP PPP G PP GN+ GP Q PP G R P PP + Q PP+ G
Sbjct: 48 QGP--PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 105
Query: 112 HRQ 114
Q
Sbjct: 106 KPQ 108
Score = 42.4 bits (98), Expect = 1e-04
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 19/82 (23%)
Query: 47 DVEDSSQRPDQGPQRPPPEGLLPR-PPGDSGNQD------------------DGPQQRPP 87
D S + P PQ PPP+G P+ PP G++ + PQ PP
Sbjct: 85 DKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPP 144
Query: 88 KPGGHHRHPPPPPFQNQQRPPR 109
GG+ + P PP Q PPR
Sbjct: 145 PAGGNPQQPQAPPAGQPQGPPR 166
Score = 37.4 bits (85), Expect = 0.005
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 17/79 (21%)
Query: 49 EDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ------QRPPKPGGHHRHPPPPPFQ 102
E+S PQ P P+G GN+ GP Q PP GG+ PPPP
Sbjct: 26 EESPSLIAGNPQGPSPQG---------GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPP-G 75
Query: 103 NQQRPPRRGHRQLSLPRFP 121
Q PP +G + S PR P
Sbjct: 76 KPQGPPPQGDKSRS-PRSP 93
Score = 34.7 bits (78), Expect = 0.029
Identities = 34/118 (28%), Positives = 42/118 (35%), Gaps = 42/118 (35%)
Query: 55 PDQGPQRPPPEGLLPR---------------------PPGDSGNQDDGPQQRPPKP---- 89
P PQ PPP+G R PP G++ + P KP
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPP 132
Query: 90 ---GGHHRHPPPPPFQNQQRP--PRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQ 142
G + + PPPP N Q+P P G Q PR P Q RP+R PQ
Sbjct: 133 QQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ-GPPRPP-----------QGGRPSRPPQ 178
Score = 34.3 bits (77), Expect = 0.038
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 51 SSQRPDQGPQRPPP-EGLLPR--PPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ-QR 106
S++ P PQ PP EG P+ PP GN PQQ P G + PP PP + R
Sbjct: 120 SARSPPGKPQGPPQQEGNNPQGPPPPAGGN----PQQPQAPPAGQPQGPPRPPQGGRPSR 175
Query: 107 PPR 109
PP+
Sbjct: 176 PPQ 178
Score = 32.3 bits (72), Expect = 0.15
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 82 PQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHP 141
PQ P+ G + PPPPP + Q PP+ G++ P P Q + R R P
Sbjct: 36 PQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPP--PPGKPQGPPPQGDKSRSPRSP 93
Query: 142 QEQP 145
+P
Sbjct: 94 PGKP 97
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 43.5 bits (101), Expect = 6e-05
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQ-----QRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
QGP PPP G PP GN+ GP Q PP G R P PP + Q PP+ G
Sbjct: 48 QGP--PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 105
Query: 112 HRQ 114
Q
Sbjct: 106 KPQ 108
Score = 42.4 bits (98), Expect = 1e-04
Identities = 40/114 (35%), Positives = 46/114 (40%), Gaps = 18/114 (15%)
Query: 47 DVEDSSQRPDQGPQRPPPEGLLPR-PPGDSGNQDDGP-----QQRPPKPGGHH----RHP 96
D S + P PQ PPP+G P+ PP GN+ GP Q PP GG R P
Sbjct: 85 DKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSP 144
Query: 97 P----PPPFQ---NQQRPPRRGHRQLSLPRFPSVSL-QEASSFFQRDRPARHPQ 142
P PP Q N Q PP P+ P Q Q RP+R PQ
Sbjct: 145 PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 198
Score = 42.0 bits (97), Expect = 2e-04
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGP------QQRPPKPGGHHRHPPPPPFQNQQRPP 108
P PQ PPP+G R P + GP Q PP GG+ PPPP + Q P
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPA 132
Query: 109 RRGHRQLS 116
+ G + S
Sbjct: 133 QGGSKSQS 140
Score = 37.4 bits (85), Expect = 0.005
Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 17/79 (21%)
Query: 49 EDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ------QRPPKPGGHHRHPPPPPFQ 102
E+S PQ P P+G GN+ GP Q PP GG+ PPPP
Sbjct: 26 EESPSLIAGNPQGPSPQG---------GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPP-G 75
Query: 103 NQQRPPRRGHRQLSLPRFP 121
Q PP +G + S PR P
Sbjct: 76 KPQGPPPQGDKSRS-PRSP 93
Score = 36.2 bits (82), Expect = 0.010
Identities = 27/68 (39%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 55 PDQG---PQRPPPEGLLPRPP--GDSGNQDDGPQQRP--PKPGGHHRHPPPPPFQNQ-QR 106
P QG PQ PPP G PP GD P +P P P G PPP N+ Q
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQG 120
Query: 107 PPRRGHRQ 114
PP G Q
Sbjct: 121 PPPPGKPQ 128
Score = 32.3 bits (72), Expect = 0.15
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 82 PQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHP 141
PQ P+ G + PPPPP + Q PP+ G++ P P Q + R R P
Sbjct: 36 PQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPP--PPGKPQGPPPQGDKSRSPRSP 93
Query: 142 QEQP 145
+P
Sbjct: 94 PGKP 97
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 46 PDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQ 105
P S Q P QG PPP+G + PPG G QQ P + G H P PFQ Q+
Sbjct: 855 PPGSQSQQGPPQGSLGPPPQGGMQGPPGPQG------QQNPAR--GPHPSQGPIPFQQQK 906
Query: 106 RP 107
P
Sbjct: 907 TP 908
Score = 37.0 bits (84), Expect = 0.006
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 57 QGPQRPPPEGLLPRPP----GDSGNQ-DDGPQQRP--PKPGGHHRHPPPPPFQNQQRPPR 109
+G Q PPP+G + PP G G+Q GP Q P P G + PP P Q QQ P R
Sbjct: 834 RGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPGP--QGQQNPAR 891
Query: 110 RGH 112
H
Sbjct: 892 GPH 894
Score = 36.2 bits (82), Expect = 0.010
Identities = 28/70 (40%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 58 GPQRPPPEGLLPRPPGDSGNQDD-GPQ-----QRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
GPQ PP P G G Q GPQ Q PP P GH PP Q Q PP G
Sbjct: 688 GPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPP--G 745
Query: 112 HRQLSLPRFP 121
R + P P
Sbjct: 746 PRGMQGPPHP 755
Score = 35.0 bits (79), Expect = 0.023
Identities = 28/86 (32%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 57 QGPQRPPPEGLLPRP---PGDSGNQ--DDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
+G R +GLLP P P G + D R P PG H P P PP G
Sbjct: 1153 RGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDTPRP----DHPPHDG 1208
Query: 112 HRQLSLPRFPSVSLQEASSFFQRDRP 137
H S R S+ + +S R RP
Sbjct: 1209 HSPASRERSSSLQGMDMASLPPRKRP 1234
Score = 34.3 bits (77), Expect = 0.038
Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 57 QGPQRPPPEGLLPRPPGD-SGNQDDGPQQRPPKPGGHHRHPP-----PPPFQNQQRPPRR 110
+GP PP GLL P + G Q+ Q PP P G PP PP Q+QQ PP
Sbjct: 811 RGPH--PPGGLLGHGPQEMRGPQEIRGMQGPP-PQGSMLGPPQELRGPPGSQSQQGPP-- 865
Query: 111 GHRQLSLPRFPSVSLQEASSFFQRDRPAR--HPQEQPL 146
Q SL P +Q + PAR HP + P+
Sbjct: 866 ---QGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI 900
Score = 28.9 bits (63), Expect = 1.6
Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 3/90 (3%)
Query: 52 SQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRG 111
SQ P QG Q+P P +P G Q RPP P G PP Q P +G
Sbjct: 595 SQIP-QGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGP--QG 651
Query: 112 HRQLSLPRFPSVSLQEASSFFQRDRPARHP 141
P+ P L RHP
Sbjct: 652 FMGPQGPQGPPQGLPRPQDMHGPQGMQRHP 681
Score = 27.7 bits (60), Expect = 3.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 46 PDVEDSSQRPDQGPQRPPPEGLLPRPPGDS--GNQDDGPQQRPPKPGGHHRHPPPPPFQN 103
PD + S+ +G R PP R PGD + P+ R + R PP ++
Sbjct: 1056 PDHREFSEGDGRGAARGPPGAWEGRRPGDERFPRDPEDPRFRGRREESFRRGAPP---RH 1112
Query: 104 QQRPPRRG 111
+ R P RG
Sbjct: 1113 EGRAPPRG 1120
Score = 26.9 bits (58), Expect = 6.1
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 14/72 (19%)
Query: 55 PDQGP-----QRPPPEGLLPRPPGDSGNQDDGPQQRPP---KPGGHHRHPP------PPP 100
P QGP Q+ P G PR P + Q GP P + G R PP P P
Sbjct: 895 PSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQGPGP 954
Query: 101 FQNQQRPPRRGH 112
+ R P H
Sbjct: 955 NKGDSRGPPNHH 966
>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
Length = 533
Score = 42.4 bits (98), Expect = 1e-04
Identities = 34/113 (30%), Positives = 45/113 (39%), Gaps = 29/113 (25%)
Query: 39 EDFTFTIPDVEDSSQRPDQGPQRPPPEG--------LLP-------------RPP-GDSG 76
+D + P+ E+ + D PPP +LP RPP G +
Sbjct: 124 DDGDYESPNEEEEAPVEDDADYEPPPSNDEEALQNSILPAKPFPNSNSMYIDRPPSGKTP 183
Query: 77 NQDDGPQQRP-----PKPGGHHRHPPPPPFQNQQRPPR-RGHRQLSLPRFPSV 123
Q P QRP P P G + P PPP N + P R R H+ LP PS+
Sbjct: 184 QQPPVPPQRPMAALPPPPAGRNHSPLPPPQTNHEEPSRSRNHKTAKLPA-PSI 235
>gi|4758666 LATS homolog 1 [Homo sapiens]
Length = 1130
Score = 42.0 bits (97), Expect = 2e-04
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 46 PDVEDSSQRPDQGPQRPPPEGLLPRPPG---------DSGNQDDGPQQRPPKPGG--HHR 94
P V + P Q PPP G P PP SGN + + P P G
Sbjct: 240 PQVRSVTPPPPPRGQTPPPRGTTPPPPSWEPNSQTKRYSGNMEYVISRISPVPPGAWQEG 299
Query: 95 HPPPPPFQNQQRPPRRGHRQLS---LPRFPSVSLQEASSF-FQRDRP 137
+PPPP + PP +G R +S + R P + +Q +S F F RP
Sbjct: 300 YPPPPLNTSPMNPPNQGQRGISSVPVGRQP-IIMQSSSKFNFPSGRP 345
Score = 27.3 bits (59), Expect = 4.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 80 DGPQQRPPKPGGHHRHPPPPPFQNQQRPPR 109
+G + PP P PPPP + Q PPR
Sbjct: 230 NGQRVNPPPPPQVRSVTPPPPPRGQTPPPR 259
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 42.0 bits (97), Expect = 2e-04
Identities = 37/103 (35%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 53 QRPDQG--PQRPPPEGLLPRPPGDSGNQDDGP---QQRPPKPGGHHRHPP-----PPPFQ 102
QR D G QR P P +S Q +GP Q P GG R PP PP F+
Sbjct: 466 QRGDPGWNGQRDAPWNNQPDAAWNS--QFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFR 523
Query: 103 NQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQP 145
PP + H Q + P P + F Q D P RHP E+P
Sbjct: 524 GPF-PPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERP 565
Score = 33.1 bits (74), Expect = 0.086
Identities = 33/103 (32%), Positives = 42/103 (40%), Gaps = 20/103 (19%)
Query: 56 DQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPP--PPFQN-------QQR 106
DQ P PP P P G Q P ++PP P HH+ PP PP+ N +QR
Sbjct: 412 DQIPPNKPPWFDQPHPVAPWGQQQ--PPEQPPYP--HHQGGPPHCPPWNNSHEGMWGEQR 467
Query: 107 --PPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPLW 147
P G R P + +A+ Q + P EQP W
Sbjct: 468 GDPGWNGQRDA-----PWNNQPDAAWNSQFEGPWNSQHEQPPW 505
Score = 26.6 bits (57), Expect = 8.0
Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 24/89 (26%)
Query: 60 QRPPPEGLLPRPPGD----SGNQDDGPQQRPPKPGGHHRHPP------------------ 97
+RPP P GD G P R P P G + HPP
Sbjct: 563 ERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHP-GINEHPPWAGPQHPDFGPPPHGFNG 621
Query: 98 PPPFQNQQRPPRRGHRQLSL-PRFPSVSL 125
PP +Q PP H SL P P L
Sbjct: 622 QPPHMRRQGPPHINHDDPSLVPNVPYFDL 650
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 2e-04
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 15 QKNILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGD 74
Q ++ PA C I S + P Q P PQ+P P P+P
Sbjct: 1621 QSSVQPAANCSIKSPQSCVVER---------PPSNQQQQPPPPPPQQPQPPPPQPQPAPQ 1671
Query: 75 SGNQDDGPQQRP-PKPGGHHRHPPPPPFQNQQRPP 108
PQQ+P P+P + PPPPP QQ+PP
Sbjct: 1672 PPPPQQQPQQQPQPQP----QQPPPPP-PPQQQPP 1701
Score = 33.5 bits (75), Expect = 0.066
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 61 RPPPEGLLPRPPGDSGNQDDGP---QQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSL 117
+ P ++ RPP + Q P Q +PP P PPPP Q Q+ P+ +Q
Sbjct: 1633 KSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPP 1692
Query: 118 PRFP 121
P P
Sbjct: 1693 PPPP 1696
Score = 27.3 bits (59), Expect = 4.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 88 KPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVS-LQEASSFFQRDRPARHPQEQP 145
+P + + PPPP Q +PP + P P Q+ Q+ P PQ+QP
Sbjct: 1642 RPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQP 1700
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 2e-04
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 15 QKNILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGD 74
Q ++ PA C I S + P Q P PQ+P P P+P
Sbjct: 1621 QSSVQPAANCSIKSPQSCVVER---------PPSNQQQQPPPPPPQQPQPPPPQPQPAPQ 1671
Query: 75 SGNQDDGPQQRP-PKPGGHHRHPPPPPFQNQQRPP 108
PQQ+P P+P + PPPPP QQ+PP
Sbjct: 1672 PPPPQQQPQQQPQPQP----QQPPPPP-PPQQQPP 1701
Score = 33.5 bits (75), Expect = 0.066
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 61 RPPPEGLLPRPPGDSGNQDDGP---QQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSL 117
+ P ++ RPP + Q P Q +PP P PPPP Q Q+ P+ +Q
Sbjct: 1633 KSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPP 1692
Query: 118 PRFP 121
P P
Sbjct: 1693 PPPP 1696
Score = 27.3 bits (59), Expect = 4.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 88 KPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVS-LQEASSFFQRDRPARHPQEQP 145
+P + + PPPP Q +PP + P P Q+ Q+ P PQ+QP
Sbjct: 1642 RPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQP 1700
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 41.6 bits (96), Expect = 2e-04
Identities = 30/95 (31%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 15 QKNILPAGTCCIYSRVEVFTDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGD 74
Q ++ PA C I S + P Q P PQ+P P P+P
Sbjct: 1621 QSSVQPAANCSIKSPQSCVVER---------PPSNQQQQPPPPPPQQPQPPPPQPQPAPQ 1671
Query: 75 SGNQDDGPQQRP-PKPGGHHRHPPPPPFQNQQRPP 108
PQQ+P P+P + PPPPP QQ+PP
Sbjct: 1672 PPPPQQQPQQQPQPQP----QQPPPPP-PPQQQPP 1701
Score = 33.5 bits (75), Expect = 0.066
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 61 RPPPEGLLPRPPGDSGNQDDGP---QQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSL 117
+ P ++ RPP + Q P Q +PP P PPPP Q Q+ P+ +Q
Sbjct: 1633 KSPQSCVVERPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPP 1692
Query: 118 PRFP 121
P P
Sbjct: 1693 PPPP 1696
Score = 27.3 bits (59), Expect = 4.7
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 88 KPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVS-LQEASSFFQRDRPARHPQEQP 145
+P + + PPPP Q +PP + P P Q+ Q+ P PQ+QP
Sbjct: 1642 RPPSNQQQQPPPPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQP 1700
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 40.8 bits (94), Expect = 4e-04
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 59 PQRPPPEGLLPRPPGDSGNQ-DDGPQQRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLS 116
P+ PP GLLP PP G Q P RP + G PPPPP + P H LS
Sbjct: 508 PKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEPLS 566
Score = 29.3 bits (64), Expect = 1.2
Identities = 16/57 (28%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 69 PRPPGDSGNQDDGPQQRPPKPGGHHRHPP-PPPFQNQQRPPRRGHRQLSLPRFPSVS 124
P P G G GP PP P G HP P P +P P ++
Sbjct: 603 PGPGGPPGPMGPGPNMGPPGPMGGPMHPDMHPDMHPDMHPDMHADMHADMPMGPGMN 659
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 40.4 bits (93), Expect = 5e-04
Identities = 35/115 (30%), Positives = 44/115 (38%), Gaps = 31/115 (26%)
Query: 42 TFTIPDVEDSSQRPDQGPQRPPPEG---LLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPP 98
T +IP + P P +G ++P PPG +PP P G PPP
Sbjct: 538 TGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPG----------VQPPLPPGAPPPPPP 587
Query: 99 PP--FQNQQRPPRRG----HRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPLW 147
PP PPR G H PR P V+L P R PQ++P W
Sbjct: 588 PPPGSAGMMIPPRGGDGPSHESEDFPR-PLVTL-----------PGRQPQQRPWW 630
Score = 37.7 bits (86), Expect = 0.003
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPP 100
+G PPP G++P PP Q P P P + PPPP
Sbjct: 467 KGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPP 510
Score = 32.3 bits (72), Expect = 0.15
Identities = 29/93 (31%), Positives = 30/93 (32%), Gaps = 25/93 (26%)
Query: 62 PPPEGLLPRPPGDSG------------------NQDDGPQQRPPKPGGHHRHPPPPPFQN 103
PPP P PPG G G PP P G PPPPP
Sbjct: 429 PPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPP-SG 487
Query: 104 QQRPPRRG------HRQLSLPRFPSVSLQEASS 130
Q PP G +Q P P S ASS
Sbjct: 488 QPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASS 520
Score = 30.0 bits (66), Expect = 0.72
Identities = 30/102 (29%), Positives = 32/102 (31%), Gaps = 42/102 (41%)
Query: 51 SSQRPDQGPQRPPPEGLLP----RPP-----------------GDSGNQDDGPQQRP-PK 88
S+ RP PPP L+ RPP G G GP P P
Sbjct: 342 SAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPL 401
Query: 89 P---GGHHRHP---------------PPPPFQNQQRPPRRGH 112
P GGH HP PPPP PP GH
Sbjct: 402 PSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPP--GH 441
Score = 28.5 bits (62), Expect = 2.1
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 16/46 (34%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPP 100
P G PPP G P PP QQ+PP PPPPP
Sbjct: 484 PPSGQPPPPPSG--PLPPWQQ------QQQQPP--------PPPPP 513
Score = 28.1 bits (61), Expect = 2.8
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 65 EGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQN--QQRPP 108
E +P G + P P+P +PPPP + Q RPP
Sbjct: 322 EAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPP 367
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 40.0 bits (92), Expect = 7e-04
Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 5/101 (4%)
Query: 46 PDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQ 105
P+ S P++ P PPPE PP + P++ P P PPP +
Sbjct: 576 PEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPM 635
Query: 106 RPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPL 146
PP P P + S R + P+E PL
Sbjct: 636 SPPPE-----ESPMSPPPEVSRLSPLPVVSRLSPPPEESPL 671
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/79 (27%), Positives = 30/79 (37%)
Query: 45 IPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ 104
+P V S P++ P PPPE PP ++ P+ P P PPP +
Sbjct: 656 LPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSL 715
Query: 105 QRPPRRGHRQLSLPRFPSV 123
P L LP P +
Sbjct: 716 MSLPLEESPLLPLPEEPQL 734
Score = 37.4 bits (85), Expect = 0.005
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 46 PDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRP--PKPGGHHRHPPP----- 98
P+ S ++ P PPPE L PP ++ P++ P P P PPP
Sbjct: 540 PEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRL 599
Query: 99 -PPFQNQQRPPRRGHRQLSLP 118
PPF+ P LS P
Sbjct: 600 FPPFEESPLSPPPEESPLSPP 620
Score = 36.6 bits (83), Expect = 0.008
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 11/79 (13%)
Query: 46 PDVEDS--SQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRP--PKPGGHHRHPP---- 97
P E+S S P++ P PPPE PP + P++ P P P PP
Sbjct: 547 PPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEES 606
Query: 98 ---PPPFQNQQRPPRRGHR 113
PPP ++ PP R
Sbjct: 607 PLSPPPEESPLSPPPEASR 625
Score = 33.9 bits (76), Expect = 0.050
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 9/98 (9%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRP--PKPGGHHRHPP-------PPPFQNQQ 105
P++ P PPPE PP ++ P++ P P P H P PPP ++
Sbjct: 444 PEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPPPEESPL 503
Query: 106 RPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQE 143
PP L P +E+ + P P E
Sbjct: 504 SPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPE 541
Score = 33.9 bits (76), Expect = 0.050
Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 6/99 (6%)
Query: 49 EDSSQRPD-QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRP 107
E+S P + P PPPE PP + P++ P P PPP ++ P
Sbjct: 524 EESPPSPALETPLSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSP 583
Query: 108 PRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPL 146
P P P F+ + P+E PL
Sbjct: 584 PPE-----ESPMSPPPEASRLFPPFEESPLSPPPEESPL 617
Score = 33.5 bits (75), Expect = 0.066
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 11/74 (14%)
Query: 46 PDVEDS--SQRPDQGPQRPPPE----GLLP-----RPPGDSGNQDDGPQQRPPKPGGHHR 94
P EDS S P++ P PPPE LP PP + P++ P P
Sbjct: 628 PPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEAS 687
Query: 95 HPPPPPFQNQQRPP 108
PPP + PP
Sbjct: 688 RLSPPPEDSPTSPP 701
Score = 29.3 bits (64), Expect = 1.2
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 55 PDQGPQRPPPEGLLPRPPGDSGNQDDGPQQRP--PKPGGHHRHPPP 98
P PQ P LP P + P P PKP G PPP
Sbjct: 4310 PPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGPTLEPPP 4355
Score = 28.5 bits (62), Expect = 2.1
Identities = 24/83 (28%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Query: 46 PDVEDSSQRPDQGPQRPPPE-GLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQ 104
P+V S P PPPE L PP +S R P PPP
Sbjct: 648 PEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPA 707
Query: 105 QRPPRRGHRQLSLPRFPSVSLQE 127
PP L L P + L E
Sbjct: 708 SPPPEDSLMSLPLEESPLLPLPE 730
Score = 27.3 bits (59), Expect = 4.7
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 46 PDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ--QRPPKPGGHHRHPPPPPFQN 103
P+ +S P+ P PPPE L P + P+ Q P+ G H P P
Sbjct: 693 PEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHL 752
Query: 104 QQRP 107
RP
Sbjct: 753 SPRP 756
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 45 IPDVEDSSQRPDQGP--QRPPPEGLLPRPPGDSGNQDDGP--QQRPPKPGGHHRHPPPPP 100
+P +SQ+P P QRPPP+G P+P G Q GP QQRPP G H PP
Sbjct: 442 LPLGRQTSQQPAGPPAQQRPPPQGGPPQP--GPGPQRQGPPLQQRPPPQGQQHLSGLGPP 499
Query: 101 FQNQQRPPRRGHRQLSLPRFPS 122
+ P+R S P+ P+
Sbjct: 500 AGSPL--PQRLPSPTSAPQQPA 519
Score = 34.7 bits (78), Expect = 0.029
Identities = 29/82 (35%), Positives = 30/82 (36%), Gaps = 18/82 (21%)
Query: 46 PDVEDSSQRPDQGPQR--------PPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRH-- 95
P S QR PQ P P PPG G Q GP Q+PP P G R
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPG--GQQRQGPPQKPPGPAGPTRQAS 605
Query: 96 ---PPP---PPFQNQQRPPRRG 111
P P PP Q RP G
Sbjct: 606 QAGPVPRTGPPTTQQPRPSGPG 627
Score = 33.1 bits (74), Expect = 0.086
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 45 IPDVEDSSQRPDQGPQ-RPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQN 103
+P P +G + P G LP S P Q+ P P G P P P +
Sbjct: 418 LPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQ 477
Query: 104 ----QQRPPRRGHRQLS 116
QQRPP +G + LS
Sbjct: 478 GPPLQQRPPPQGQQHLS 494
Score = 26.9 bits (58), Expect = 6.1
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 17/81 (20%)
Query: 54 RPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQR----------PPK-----PGGHHRHPPP 98
RP G PP P P S + GP Q PPK PGG R PP
Sbjct: 534 RPVAGGPGAPPAARPPASP--SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591
Query: 99 PPFQNQQRPPRRGHRQLSLPR 119
P R+ + +PR
Sbjct: 592 QKPPGPAGPTRQASQAGPVPR 612
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 39.7 bits (91), Expect = 0.001
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 45 IPDVEDSSQRPDQGP--QRPPPEGLLPRPPGDSGNQDDGP--QQRPPKPGGHHRHPPPPP 100
+P +SQ+P P QRPPP+G P+P G Q GP QQRPP G H PP
Sbjct: 442 LPLGRQTSQQPAGPPAQQRPPPQGGPPQP--GPGPQRQGPPLQQRPPPQGQQHLSGLGPP 499
Query: 101 FQNQQRPPRRGHRQLSLPRFPS 122
+ P+R S P+ P+
Sbjct: 500 AGSPL--PQRLPSPTSAPQQPA 519
Score = 34.7 bits (78), Expect = 0.029
Identities = 29/82 (35%), Positives = 30/82 (36%), Gaps = 18/82 (21%)
Query: 46 PDVEDSSQRPDQGPQR--------PPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRH-- 95
P S QR PQ P P PPG G Q GP Q+PP P G R
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAPPKASGAPPG--GQQRQGPPQKPPGPAGPTRQAS 605
Query: 96 ---PPP---PPFQNQQRPPRRG 111
P P PP Q RP G
Sbjct: 606 QAGPVPRTGPPTTQQPRPSGPG 627
Score = 33.1 bits (74), Expect = 0.086
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 45 IPDVEDSSQRPDQGPQ-RPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQN 103
+P P +G + P G LP S P Q+ P P G P P P +
Sbjct: 418 LPRQRQRDASPGRGSHGQTPSPGALPLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQ 477
Query: 104 ----QQRPPRRGHRQLS 116
QQRPP +G + LS
Sbjct: 478 GPPLQQRPPPQGQQHLS 494
Score = 26.9 bits (58), Expect = 6.1
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 17/81 (20%)
Query: 54 RPDQGPQRPPPEGLLPRPPGDSGNQDDGPQQR----------PPK-----PGGHHRHPPP 98
RP G PP P P S + GP Q PPK PGG R PP
Sbjct: 534 RPVAGGPGAPPAARPPASP--SPQRQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPP 591
Query: 99 PPFQNQQRPPRRGHRQLSLPR 119
P R+ + +PR
Sbjct: 592 QKPPGPAGPTRQASQAGPVPR 612
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 39.3 bits (90), Expect = 0.001
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 58 GPQRPPPEGLLPRPPGDSG---NQDDGPQQRPPKPG-GHHRHPPPPPFQNQQRPP 108
GP PPP LP P + GP PP P G PPPPP NQ PP
Sbjct: 309 GPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPP 363
Score = 34.3 bits (77), Expect = 0.038
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 62 PPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPP 100
PPP G P PP S GP PP P ++ PPPPP
Sbjct: 331 PPPPGPPPPPPLPS----TGPPPPPPPPPLPNQVPPPPP 365
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 39.3 bits (90), Expect = 0.001
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 58 GPQRPPPEGLLPRPPGDSG---NQDDGPQQRPPKPG-GHHRHPPPPPFQNQQRPP 108
GP PPP LP P + GP PP P G PPPPP NQ PP
Sbjct: 309 GPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPP 363
Score = 34.3 bits (77), Expect = 0.038
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 62 PPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPP 100
PPP G P PP S GP PP P ++ PPPPP
Sbjct: 331 PPPPGPPPPPPLPS----TGPPPPPPPPPLPNQVPPPPP 365
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 10/52 (19%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPP 108
+GP PPP ++ PP P RPP P G R PPPPP RPP
Sbjct: 30 RGPA-PPPNAVMRGPP---------PLMRPPPPFGMMRGPPPPPRPPFGRPP 71
Score = 31.2 bits (69), Expect = 0.33
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGG--HHRHPP--PPPFQNQQRPP 108
+GP PPP RPP D P P P G H + PP PPP + PP
Sbjct: 57 RGPP-PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPP 111
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 39.3 bits (90), Expect = 0.001
Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 10/52 (19%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGGHHRHPPPPPFQNQQRPP 108
+GP PPP ++ PP P RPP P G R PPPPP RPP
Sbjct: 30 RGPA-PPPNAVMRGPP---------PLMRPPPPFGMMRGPPPPPRPPFGRPP 71
Score = 31.2 bits (69), Expect = 0.33
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 57 QGPQRPPPEGLLPRPPGDSGNQDDGPQQRPPKPGG--HHRHPP--PPPFQNQQRPP 108
+GP PPP RPP D P P P G H + PP PPP + PP
Sbjct: 57 RGPP-PPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMSSMPPPP 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.140 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,993,792
Number of Sequences: 37866
Number of extensions: 776081
Number of successful extensions: 9796
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 728
Number of HSP's that attempted gapping in prelim test: 5183
Number of HSP's gapped (non-prelim): 3795
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.