Guide to the Human Genome
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Name: PRR4 Sequence: fasta or formatted (134aa) NCBI GI: 154448886
Description:

proline rich 4 (lacrimal) isoform 2

Referenced in:

Lacrimal and Salivary Glands

Other entries for this name:
alt prot [147aa] proline rich 4 (lacrimal) isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0          4           1
 C cysteine            0.0          0           0
 D aspartate           7.5         10           2
 E glutamate           3.7          5           1
 F phenylalanine       4.5          6           2
 G glycine             6.0          8           2
 H histidine           3.7          5           2
 I isoleucine          0.7          1           1
 K lysine              0.7          1           1
 L leucine             9.7         13           2
 M methionine          0.7          1           1
 N asparagine          3.0          4           1
 P proline            18.7         25           5
 Q glutamine          11.2         15           2
 R arginine            9.7         13           2
 S serine              9.0         12           2
 T threonine           2.2          3           1
 V valine              4.5          6           2
 W tryptophan          0.7          1           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline rich 4 (lacrimal) isoform 2 
PRR4                  0.866   proline rich 4 (lacrimal) isoform 1 
PRH1                  0.271   proline-rich protein HaeIII subfamily 1 
PRH2                  0.271   proline-rich protein HaeIII subfamily 2 
PRH2                  0.271   proline-rich protein HaeIII subfamily 2 
PRB4                  0.218   proline-rich protein BstNI subfamily 4 precursor [Ho...
PRB3                  0.195   proline-rich protein BstNI subfamily 3 precursor [H...
PRB2                  0.172   proline-rich protein BstNI subfamily 2 
PRB1                  0.164   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB1                  0.160   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRB1                  0.160   proline-rich protein BstNI subfamily 1 isoform 2 pre...
RBM33                 0.080   RNA binding motif protein 33 
ZFHX4                 0.076   zinc finger homeodomain 4 
SFPQ                  0.073   splicing factor proline/glutamine rich (polypyrimidin...
LCP2                  0.069   lymphocyte cytosolic protein 2 
WDR33                 0.069   WD repeat domain 33 isoform 1 
LATS1                 0.065   LATS homolog 1 
CHERP                 0.065   calcium homeostasis endoplasmic reticulum protein [...
MYST3                 0.061   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.061   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.061   MYST histone acetyltransferase (monocytic leukemia)...
ZC3H4                 0.061   zinc finger CCCH-type containing 4 
SF1                   0.057   splicing factor 1 isoform 2 
MLL2                  0.057   myeloid/lymphoid or mixed-lineage leukemia 2 
SYN1                  0.057   synapsin I isoform Ia 
SYN1                  0.057   synapsin I isoform Ib 
ENAH                  0.053   enabled homolog isoform a 
ENAH                  0.053   enabled homolog isoform b 
TCERG1                0.053   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.053   transcription elongation regulator 1 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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