Guide to the Human Genome
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Name: PRR4 Sequence: fasta or formatted (147aa) NCBI GI: 154448882
Description:

proline rich 4 (lacrimal) isoform 1

Referenced in:

Lacrimal and Salivary Glands

Other entries for this name:
alt prot [134aa] proline rich 4 (lacrimal) isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          3           1
 C cysteine            1.4          2           2
 D aspartate           6.8         10           2
 E glutamate           4.8          7           1
 F phenylalanine       4.8          7           2
 G glycine             6.8         10           2
 H histidine           3.4          5           2
 I isoleucine          3.4          5           1
 K lysine              1.4          2           1
 L leucine             6.1          9           2
 M methionine          0.7          1           1
 N asparagine          2.7          4           1
 P proline            18.4         27           5
 Q glutamine          10.2         15           2
 R arginine           10.2         15           2
 S serine              6.8         10           2
 T threonine           2.7          4           1
 V valine              3.4          5           1
 W tryptophan          1.4          2           1
 Y tyrosine            2.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   proline rich 4 (lacrimal) isoform 1 
PRR4                  0.759   proline rich 4 (lacrimal) isoform 2 
PRH1                  0.161   proline-rich protein HaeIII subfamily 1 
PRH2                  0.154   proline-rich protein HaeIII subfamily 2 
PRH2                  0.154   proline-rich protein HaeIII subfamily 2 
PRB4                  0.107   proline-rich protein BstNI subfamily 4 precursor [Ho...
PRB3                  0.087   proline-rich protein BstNI subfamily 3 precursor [H...
PRB1                  0.080   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB2                  0.077   proline-rich protein BstNI subfamily 2 
RBM33                 0.070   RNA binding motif protein 33 
ZFHX4                 0.067   zinc finger homeodomain 4 
SFPQ                  0.064   splicing factor proline/glutamine rich (polypyrimidin...
PRB1                  0.064   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRB1                  0.064   proline-rich protein BstNI subfamily 1 isoform 2 pre...
WDR33                 0.060   WD repeat domain 33 isoform 1 
LCP2                  0.057   lymphocyte cytosolic protein 2 
LATS1                 0.057   LATS homolog 1 
CHERP                 0.057   calcium homeostasis endoplasmic reticulum protein [...
MYST3                 0.057   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.057   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.057   MYST histone acetyltransferase (monocytic leukemia)...
ZC3H4                 0.054   zinc finger CCCH-type containing 4 
SF1                   0.050   splicing factor 1 isoform 2 
MLL2                  0.050   myeloid/lymphoid or mixed-lineage leukemia 2 
SYN1                  0.050   synapsin I isoform Ia 
SYN1                  0.050   synapsin I isoform Ib 
ENAH                  0.047   enabled homolog isoform a 
ENAH                  0.047   enabled homolog isoform b 
TCERG1                0.047   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.047   transcription elongation regulator 1 isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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