Guide to the Human Genome
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Name: ELMOD3 Sequence: fasta or formatted (381aa) NCBI GI: 203098539
Description:

ELMO/CED-12 domain containing 3 isoform b

Referenced in:

RNA-binding Proteins

Other entries for this name:
alt mRNA [381aa] ELMO/CED-12 domain containing 3 isoform b
alt mRNA [381aa] ELMO/CED-12 domain containing 3 isoform b
alt prot [391aa] ELMO/CED-12 domain containing 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         27           2
 C cysteine            1.8          7           1
 D aspartate           3.9         15           1
 E glutamate           7.3         28           2
 F phenylalanine       4.5         17           1
 G glycine             6.0         23           1
 H histidine           3.9         15           2
 I isoleucine          4.5         17           1
 K lysine              5.5         21           2
 L leucine            12.6         48           2
 M methionine          1.0          4           1
 N asparagine          1.8          7           1
 P proline             4.7         18           2
 Q glutamine           6.6         25           2
 R arginine            6.3         24           2
 S serine              8.1         31           2
 T threonine           5.2         20           2
 V valine              5.2         20           2
 W tryptophan          1.3          5           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                1.000   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                1.000   ELMO/CED-12 domain containing 3 isoform b 
ELMOD3                0.823   ELMO/CED-12 domain containing 3 isoform a 
ELMOD2                0.047   ELMO/CED-12 domain containing 2 
ELMOD1                0.036   ELMO/CED-12 domain containing 1 isoform 2 
ELMOD1                0.035   ELMO/CED-12 domain containing 1 isoform 1 
ELMO3                 0.019   engulfment and cell motility 3 
C21orf91              0.009   early undifferentiated retina and lens isoform 1 [H...
HIVEP2                0.009   human immunodeficiency virus type I enhancer bindin...
ELMO1                 0.008   engulfment and cell motility 1 isoform 1 
OR52R1                0.007   olfactory receptor, family 52, subfamily R, member ...
FAM90A20              0.007   PREDICTED: hypothetical protein 
FAM90A20              0.007   PREDICTED: hypothetical protein 
GPR26                 0.005   G protein-coupled receptor 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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