Guide to the Human Genome
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Name: C21orf91 Sequence: fasta or formatted (296aa) NCBI GI: 154426302
Description:

early undifferentiated retina and lens isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {221aa} early undifferentiated retina and lens isoform 3
alt prot {297aa} early undifferentiated retina and lens isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         10           1
 C cysteine            3.7         11           1
 D aspartate           4.7         14           2
 E glutamate           8.4         25           3
 F phenylalanine       3.0          9           1
 G glycine             4.1         12           2
 H histidine           5.1         15           2
 I isoleucine          5.1         15           1
 K lysine              8.1         24           2
 L leucine            10.8         32           2
 M methionine          1.4          4           1
 N asparagine          6.8         20           2
 P proline             3.7         11           1
 Q glutamine           7.8         23           2
 R arginine            3.0          9           1
 S serine              9.1         27           2
 T threonine           4.4         13           1
 V valine              4.7         14           1
 W tryptophan          1.0          3           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   early undifferentiated retina and lens isoform 2 [H... 
C21orf91              0.993   early undifferentiated retina and lens isoform 1 [H...
C21orf91              0.751   early undifferentiated retina and lens isoform 3 [H...
SRGAP1                0.015   SLIT-ROBO Rho GTPase activating protein 1 
NES                   0.012   nestin 
GLCCI1                0.012   glucocorticoid induced transcript 1 
C6orf204              0.012   chromosome 6 open reading frame 204 isoform a [Homo...
C1orf71               0.012   hypothetical protein LOC163882 isoform 2 
C1orf71               0.012   hypothetical protein LOC163882 isoform 1 
SECISBP2L             0.012   SECIS binding protein 2-like 
ZFP37                 0.012   zinc finger protein 37 homolog 
KIF7                  0.010   kinesin family member 7 
GOLGB1                0.010   golgi autoantigen, golgin subfamily b, macrogolgin ...
LRRIQ1                0.010   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.010   leucine-rich repeats and IQ motif containing 1 isof...
C11orf63              0.009   hypothetical protein LOC79864 isoform 2 
C11orf63              0.009   hypothetical protein LOC79864 isoform 1 
MYH13                 0.009   myosin, heavy polypeptide 13, skeletal muscle [Homo...
ANKRD24               0.009   ankyrin repeat domain 24 
PCNT                  0.009   pericentrin 
TRIP11                0.007   thyroid hormone receptor interactor 11 
FAM81B                0.007   hypothetical protein LOC153643 
RABEP2                0.007   rabaptin, RAB GTPase binding effector protein 2 [Ho...
SDCCAG8               0.007   serologically defined colon cancer antigen 8 
KTN1                  0.007   kinectin 1 isoform b 
KTN1                  0.007   kinectin 1 isoform a 
KTN1                  0.007   kinectin 1 isoform c 
KTN1                  0.007   kinectin 1 isoform a 
AUTS2                 0.007   autism susceptibility candidate 2 isoform 2 
AUTS2                 0.007   autism susceptibility candidate 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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