Guide to the Human Genome
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Search of human proteins with 154354976

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154354976 pituitary tumor-transforming 2 [Homo sapiens]
         (191 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154354976 pituitary tumor-transforming 2 [Homo sapiens]            384   e-107
gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens]      314   3e-86
gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]     34   0.088
gi|4827004 single-minded homolog 2 long isoform [Homo sapiens]         33   0.20 
gi|194239684 single-minded homolog 2 short isoform [Homo sapiens]      33   0.20 
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ...    30   1.3  
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    30   1.7  
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    30   1.7  
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    30   1.7  
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    30   1.7  
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    30   1.7  
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ...    30   1.7  
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     29   2.2  
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]    29   2.2  
gi|148612857 sickle tail isoform 3 [Homo sapiens]                      29   2.8  
gi|148612813 sickle tail isoform 2 [Homo sapiens]                      29   2.8  
gi|6912494 microtubule-associated protein, RP/EB family, member ...    29   2.8  
gi|150170670 piccolo isoform 2 [Homo sapiens]                          29   2.8  
gi|150378539 piccolo isoform 1 [Homo sapiens]                          29   2.8  
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           29   2.8  
gi|50843820 sickle tail isoform 1 [Homo sapiens]                       28   3.7  
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]                         28   3.7  
gi|32528306 replication factor C large subunit [Homo sapiens]          28   4.8  
gi|83367077 mucin 16 [Homo sapiens]                                    28   4.8  
gi|197927454 DEK oncogene isoform 2 [Homo sapiens]                     28   4.8  
gi|4503249 DEK oncogene isoform 1 [Homo sapiens]                       28   4.8  
gi|46399200 testis-specific bromodomain protein [Homo sapiens]         28   4.8  
gi|46399198 testis-specific bromodomain protein [Homo sapiens]         28   4.8  
gi|124430752 kinesin family member 26B [Homo sapiens]                  28   4.8  
gi|156564384 deltex 2 isoform a [Homo sapiens]                         28   6.3  

>gi|154354976 pituitary tumor-transforming 2 [Homo sapiens]
          Length = 191

 Score =  384 bits (986), Expect = e-107
 Identities = 191/191 (100%), Positives = 191/191 (100%)

Query: 1   MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60
           MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT
Sbjct: 1   MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60

Query: 61  RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120
           RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF
Sbjct: 61  RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120

Query: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNLFA 180
           NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNLFA
Sbjct: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNLFA 180

Query: 181 VSFKHSVDPGC 191
           VSFKHSVDPGC
Sbjct: 181 VSFKHSVDPGC 191


>gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens]
          Length = 202

 Score =  314 bits (804), Expect = 3e-86
 Identities = 161/178 (90%), Positives = 162/178 (91%)

Query: 1   MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60
           MATLIYVDKE GEPGTRV AKD LKL S PSIKALDG SQV T RFGKT+DAP ALPKAT
Sbjct: 1   MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 60

Query: 61  RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120
           RKALGTVNRATEKSVKT GP KQKQPSFSAKKMTEKTVK KSSVPASDDAYPEIEKFFPF
Sbjct: 61  RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 120

Query: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNL 178
           N LDFESFDLPEE QIAHLPLSGVPLMILDEE ELEKLFQLGPPSPVKMPSPPWE NL
Sbjct: 121 NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNL 178


>gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens]
          Length = 745

 Score = 33.9 bits (76), Expect = 0.088
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 47  GKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAK---KMTEKTVKTKSS 103
           GKTY  P    K  RK +  +N +  KS++     K+ Q   S+K    +TE     +  
Sbjct: 476 GKTYKRPPMELKTKRKVIKEMNISFWKSIEKEEEEKKAQLELSSKINNTLTECLNLIEGG 535

Query: 104 VPASD-----DAYPEIEKFFPF 120
           VP+++      + PE EKF  F
Sbjct: 536 VPSNEILNILSSIPEAEKFAKF 557


>gi|4827004 single-minded homolog 2 long isoform [Homo sapiens]
          Length = 667

 Score = 32.7 bits (73), Expect = 0.20
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 38  ISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKM-TEK 96
           + QV T +   ++    +  + TRK +   N   +  ++TN    Q+  SF   K+   +
Sbjct: 344 LEQVSTAKSQDSWRTALSTSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQ 403

Query: 97  TVKTKSSVPASDDAYPEIEKFF-PFNLLDFESFDLPEERQIAHLPL 141
               ++S PAS  A PE++      +LL   S+ LP      H PL
Sbjct: 404 LGNWRASPPASAAAPPELQPHSESSDLLYTPSYSLPFSYHYGHFPL 449


>gi|194239684 single-minded homolog 2 short isoform [Homo sapiens]
          Length = 570

 Score = 32.7 bits (73), Expect = 0.20
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 38  ISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKM-TEK 96
           + QV T +   ++    +  + TRK +   N   +  ++TN    Q+  SF   K+   +
Sbjct: 344 LEQVSTAKSQDSWRTALSTSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQ 403

Query: 97  TVKTKSSVPASDDAYPEIEKFF-PFNLLDFESFDLPEERQIAHLPL 141
               ++S PAS  A PE++      +LL   S+ LP      H PL
Sbjct: 404 LGNWRASPPASAAAPPELQPHSESSDLLYTPSYSLPFSYHYGHFPL 449


>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
           sapiens]
          Length = 834

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 6/125 (4%)

Query: 52  APSALPKATRKALGTVN-RATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           APS +P    KA  T+    T K   T+ P    + SF     T+ T  +  + PA+  A
Sbjct: 251 APSMVPATDTKAPPTLQAETTTKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 308

Query: 111 YPEIEKFFPFNLLDFESFDLPEERQIAHLP--LSGVPLMILDEEGELEKLFQ-LGPPSPV 167
            P  +  F       +    P    ++      S +P          + +F  +GPP+ V
Sbjct: 309 SPMFKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 368

Query: 168 KMPSP 172
            +P+P
Sbjct: 369 PLPAP 373


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
           [Homo sapiens]
          Length = 1412

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 51  DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           + P+A+  A  K+LG + +A   S    GP ++  P     K  +    ++SS  +SD A
Sbjct: 482 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 541

Query: 111 YPE 113
             E
Sbjct: 542 DSE 544


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
           [Homo sapiens]
          Length = 1451

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 51  DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           + P+A+  A  K+LG + +A   S    GP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
           [Homo sapiens]
          Length = 1488

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 51  DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           + P+A+  A  K+LG + +A   S    GP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
           [Homo sapiens]
          Length = 1411

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 51  DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           + P+A+  A  K+LG + +A   S    GP ++  P     K  +    ++SS  +SD A
Sbjct: 482 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 541

Query: 111 YPE 113
             E
Sbjct: 542 DSE 544


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
           [Homo sapiens]
          Length = 1450

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 51  DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           + P+A+  A  K+LG + +A   S    GP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
           [Homo sapiens]
          Length = 958

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 51  DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           + P+A+  A  K+LG + +A   S    GP ++  P     K  +    ++SS  +SD A
Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618

Query: 111 YPE 113
             E
Sbjct: 619 DSE 621


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 72   EKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPE 113
            EK  ++N PR + Q     K   EK  +T S   A+D  +PE
Sbjct: 1850 EKLKRSNSPRGEAQKLLELKMEAEKITRTASKNSAADLEHPE 1891


>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
          Length = 987

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 52  APSALPKATRKALGTVNRATE-KSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           APS +P    KA  T+   T  K   T+ P    + SF     T+ T  +  + PA+  A
Sbjct: 402 APSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 459

Query: 111 YPEIEKFFPFNLLDFESFDLPEERQI-AHLPLSG-VPLMILDEEGELEKLFQ-LGPPSPV 167
            P  +  F       +    P    + A  P S  +P          + +F  +GPP+ V
Sbjct: 460 SPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 519

Query: 168 KMPSP 172
            +P+P
Sbjct: 520 PLPAP 524


>gi|148612857 sickle tail isoform 3 [Homo sapiens]
          Length = 1309

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 36   DGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTE 95
            D I   L    G    +   +P + +   GT+++  ++S K   PR+ +Q + SAKK   
Sbjct: 1096 DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS-KLQDPRQYRQANGSAKKSGG 1154

Query: 96   KTVKTKSSVPAS 107
                T  S+PAS
Sbjct: 1155 DFKPTSPSLPAS 1166


>gi|148612813 sickle tail isoform 2 [Homo sapiens]
          Length = 1264

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 36   DGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTE 95
            D I   L    G    +   +P + +   GT+++  ++S K   PR+ +Q + SAKK   
Sbjct: 1051 DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS-KLQDPRQYRQANGSAKKSGG 1109

Query: 96   KTVKTKSSVPAS 107
                T  S+PAS
Sbjct: 1110 DFKPTSPSLPAS 1121


>gi|6912494 microtubule-associated protein, RP/EB family, member 1
           [Homo sapiens]
          Length = 268

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 41  VLTRRFGKTYDAPSALPKAT---RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKT 97
           V  R+  +T  APS +  A    +K L + + A ++ + T       Q + +A K     
Sbjct: 127 VAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPIST-------QRTAAAPKAGPGV 179

Query: 98  VKTKSSVPASDDAYPEIEKFFPFNLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEK 157
           V+    V   DD   E+ +    N+L     DL +ER      L  + L+  + EGE + 
Sbjct: 180 VRKNPGVGNGDDEAAELMQ--QVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDP 237

Query: 158 LFQ 160
           + Q
Sbjct: 238 VLQ 240


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 25   KLESRPSIKALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTN----GP 80
            KLE R + K +    Q  T+  G     P +LPK   K   T+    +           P
Sbjct: 1275 KLEGRVAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEP 1334

Query: 81   RKQKQPSFSAKKMTEKTVKTKSSVPASDDAY 111
             K+K      K  T  + + KS    SD  Y
Sbjct: 1335 GKEKTEKEDDKSDTSSSQQPKSPQGLSDTGY 1365


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 25   KLESRPSIKALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTN----GP 80
            KLE R + K +    Q  T+  G     P +LPK   K   T+    +           P
Sbjct: 1275 KLEGRVAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEP 1334

Query: 81   RKQKQPSFSAKKMTEKTVKTKSSVPASDDAY 111
             K+K      K  T  + + KS    SD  Y
Sbjct: 1335 GKEKTEKEDDKSDTSSSQQPKSPQGLSDTGY 1365


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 28.9 bits (63), Expect = 2.8
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 52  APSALPKATRKALGTVNRATE-KSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110
           APS +P    KA  T+   T  K   T+ P    + SF     T+ T  +  + PA+  A
Sbjct: 402 APSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 459

Query: 111 YPEIEKFFPFNLLDFESFDLPEERQI-AHLPLSG-VPLMILDEEGELEKLFQ-LGPPSPV 167
            P  +  F       +    P    + A  P S  +P          + +F  +GPP+ V
Sbjct: 460 PPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 519

Query: 168 KMPSP 172
            +P+P
Sbjct: 520 PLPAP 524


>gi|50843820 sickle tail isoform 1 [Homo sapiens]
          Length = 1943

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 56   LPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPAS 107
            +P + +   GT+++  ++S K   PR+ +Q + SAKK       T  S+PAS
Sbjct: 1750 VPMSAKNRPGTLDKPGKQS-KLQDPRQYRQANGSAKKSGGDFKPTSPSLPAS 1800


>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
          Length = 3957

 Score = 28.5 bits (62), Expect = 3.7
 Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 5    IYVDKEIGEPGTRVAAKDVLKLESRPSIK----ALDGISQVLTRRFGKTYDAPSALPKAT 60
            +++D+ +  P       D +K E  P++     ALDG S+ L           S +    
Sbjct: 2164 LHLDQVLTSPFNTTFPLDYMKDEFLPALSLQSGALDGSSESLKNEGVAGSPCGSLME--- 2220

Query: 61   RKALGTVNRATEKSVKTNGPRKQKQPS-----FSAKKMTEKTVKTKSSVPASDDAYPEIE 115
                GT   ++E+S K  G  +  + S     FS KK  E+T +TK S           E
Sbjct: 2221 ----GTPQISSEESYKHEGLAETPETSPESLSFSPKKSEEQTGETKESTKTETTTEIRSE 2276

Query: 116  KFFP 119
            K  P
Sbjct: 2277 KEHP 2280


>gi|32528306 replication factor C large subunit [Homo sapiens]
          Length = 1147

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 57  PKATRKALGTVNRATEKSVKTNGP--RKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPE 113
           PKA+ K L  + R  E S K   P   K+K+ +   K  T+   KTKSS    +   PE
Sbjct: 313 PKASSK-LAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPE 370


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 11   IGEPGTRVAAKDVLKLESRPSIKALDGISQ--VLTRRFGKTYDAPSALPKATRKALGTVN 68
            I   GT ++  D   +    S +A+  +S   ++T          +  P AT +  GT+ 
Sbjct: 8454 ISSRGTSMSGPDQFTISPDISTEAITRLSTSPIMTESAESAITIETGSPGATSE--GTLT 8511

Query: 69   RATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVP 105
              T  +   +G      P FS  +MT    +T   VP
Sbjct: 8512 LDTSTTTFWSGTHSTASPGFSHSEMTTLMSRTPGDVP 8548


>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
          Length = 341

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/60 (31%), Positives = 26/60 (43%)

Query: 57  PKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEK 116
           PK T K      +AT KS K+      K+   S  K  + + K +S    S D  P I+K
Sbjct: 222 PKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKK 281


>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
          Length = 375

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 19/60 (31%), Positives = 26/60 (43%)

Query: 57  PKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEK 116
           PK T K      +AT KS K+      K+   S  K  + + K +S    S D  P I+K
Sbjct: 256 PKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKK 315


>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
          Length = 947

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 17/119 (14%)

Query: 18  VAAKDVLKLESRPSI---KALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKS 74
           V  K+ +K  ++ +I    A +  S   T +  K  + PS  PK +   L  V  A+  S
Sbjct: 140 VGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNS 199

Query: 75  VKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDD----------AYPEIEKFFPFNLL 123
                 +  K      K+  + T    S+V AS +          A P I++  P N+L
Sbjct: 200 SSQTAAQVTK----GVKRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVL 254


>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
          Length = 947

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 17/119 (14%)

Query: 18  VAAKDVLKLESRPSI---KALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKS 74
           V  K+ +K  ++ +I    A +  S   T +  K  + PS  PK +   L  V  A+  S
Sbjct: 140 VGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNS 199

Query: 75  VKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDD----------AYPEIEKFFPFNLL 123
                 +  K      K+  + T    S+V AS +          A P I++  P N+L
Sbjct: 200 SSQTAAQVTK----GVKRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVL 254


>gi|124430752 kinesin family member 26B [Homo sapiens]
          Length = 2108

 Score = 28.1 bits (61), Expect = 4.8
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 42   LTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQ--KQPSFSAKKMTEKTVK 99
            L R  G +  +  A PKA +  +  V+R    S +  GP     K  SFS K + +   +
Sbjct: 1710 LGRSAGTSPPSSGASPKAGQSKISAVSRLLLASPRARGPSASTTKTLSFSTKSLPQAVGQ 1769

Query: 100  TKSSVP 105
              SS P
Sbjct: 1770 GSSSPP 1775


>gi|156564384 deltex 2 isoform a [Homo sapiens]
          Length = 622

 Score = 27.7 bits (60), Expect = 6.3
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 12/91 (13%)

Query: 33  KALDGISQVLTRRFGKTYDAPSA----LPKATR---KALGTVNRATEKSVKTNGPRKQKQ 85
           +AL G++ VL    G       A     P A+R   K+ G+V R  + SVK   P+ + +
Sbjct: 333 QALAGMTSVLMSAIGLPVCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPE 392

Query: 86  PSFSAKKMTEKTVKTKSSVPASDDAYPEIEK 116
           P    K  TE+       VP  +D    +EK
Sbjct: 393 PEQVIKNYTEEL-----KVPPDEDCIICMEK 418


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.132    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,870,944
Number of Sequences: 37866
Number of extensions: 366438
Number of successful extensions: 1085
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1066
Number of HSP's gapped (non-prelim): 47
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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