BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|154354976 pituitary tumor-transforming 2 [Homo sapiens] (191 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154354976 pituitary tumor-transforming 2 [Homo sapiens] 384 e-107 gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens] 314 3e-86 gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens] 34 0.088 gi|4827004 single-minded homolog 2 long isoform [Homo sapiens] 33 0.20 gi|194239684 single-minded homolog 2 short isoform [Homo sapiens] 33 0.20 gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 30 1.3 gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 30 1.7 gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 30 1.7 gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 30 1.7 gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 30 1.7 gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 30 1.7 gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 30 1.7 gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 29 2.2 gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 29 2.2 gi|148612857 sickle tail isoform 3 [Homo sapiens] 29 2.8 gi|148612813 sickle tail isoform 2 [Homo sapiens] 29 2.8 gi|6912494 microtubule-associated protein, RP/EB family, member ... 29 2.8 gi|150170670 piccolo isoform 2 [Homo sapiens] 29 2.8 gi|150378539 piccolo isoform 1 [Homo sapiens] 29 2.8 gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 29 2.8 gi|50843820 sickle tail isoform 1 [Homo sapiens] 28 3.7 gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 28 3.7 gi|32528306 replication factor C large subunit [Homo sapiens] 28 4.8 gi|83367077 mucin 16 [Homo sapiens] 28 4.8 gi|197927454 DEK oncogene isoform 2 [Homo sapiens] 28 4.8 gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 28 4.8 gi|46399200 testis-specific bromodomain protein [Homo sapiens] 28 4.8 gi|46399198 testis-specific bromodomain protein [Homo sapiens] 28 4.8 gi|124430752 kinesin family member 26B [Homo sapiens] 28 4.8 gi|156564384 deltex 2 isoform a [Homo sapiens] 28 6.3 >gi|154354976 pituitary tumor-transforming 2 [Homo sapiens] Length = 191 Score = 384 bits (986), Expect = e-107 Identities = 191/191 (100%), Positives = 191/191 (100%) Query: 1 MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60 MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT Sbjct: 1 MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60 Query: 61 RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120 RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF Sbjct: 61 RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120 Query: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNLFA 180 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNLFA Sbjct: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNLFA 180 Query: 181 VSFKHSVDPGC 191 VSFKHSVDPGC Sbjct: 181 VSFKHSVDPGC 191 >gi|4758980 pituitary tumor-transforming protein 1 [Homo sapiens] Length = 202 Score = 314 bits (804), Expect = 3e-86 Identities = 161/178 (90%), Positives = 162/178 (91%) Query: 1 MATLIYVDKEIGEPGTRVAAKDVLKLESRPSIKALDGISQVLTRRFGKTYDAPSALPKAT 60 MATLIYVDKE GEPGTRV AKD LKL S PSIKALDG SQV T RFGKT+DAP ALPKAT Sbjct: 1 MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKAT 60 Query: 61 RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEKFFPF 120 RKALGTVNRATEKSVKT GP KQKQPSFSAKKMTEKTVK KSSVPASDDAYPEIEKFFPF Sbjct: 61 RKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPF 120 Query: 121 NLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEKLFQLGPPSPVKMPSPPWECNL 178 N LDFESFDLPEE QIAHLPLSGVPLMILDEE ELEKLFQLGPPSPVKMPSPPWE NL Sbjct: 121 NPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNL 178 >gi|167466272 cytoskeleton associated protein 2-like [Homo sapiens] Length = 745 Score = 33.9 bits (76), Expect = 0.088 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Query: 47 GKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAK---KMTEKTVKTKSS 103 GKTY P K RK + +N + KS++ K+ Q S+K +TE + Sbjct: 476 GKTYKRPPMELKTKRKVIKEMNISFWKSIEKEEEEKKAQLELSSKINNTLTECLNLIEGG 535 Query: 104 VPASD-----DAYPEIEKFFPF 120 VP+++ + PE EKF F Sbjct: 536 VPSNEILNILSSIPEAEKFAKF 557 >gi|4827004 single-minded homolog 2 long isoform [Homo sapiens] Length = 667 Score = 32.7 bits (73), Expect = 0.20 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 38 ISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKM-TEK 96 + QV T + ++ + + TRK + N + ++TN Q+ SF K+ + Sbjct: 344 LEQVSTAKSQDSWRTALSTSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQ 403 Query: 97 TVKTKSSVPASDDAYPEIEKFF-PFNLLDFESFDLPEERQIAHLPL 141 ++S PAS A PE++ +LL S+ LP H PL Sbjct: 404 LGNWRASPPASAAAPPELQPHSESSDLLYTPSYSLPFSYHYGHFPL 449 >gi|194239684 single-minded homolog 2 short isoform [Homo sapiens] Length = 570 Score = 32.7 bits (73), Expect = 0.20 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 38 ISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKM-TEK 96 + QV T + ++ + + TRK + N + ++TN Q+ SF K+ + Sbjct: 344 LEQVSTAKSQDSWRTALSTSQETRKLVKPKNTKMKTKLRTNPYPPQQYSSFQMDKLECGQ 403 Query: 97 TVKTKSSVPASDDAYPEIEKFF-PFNLLDFESFDLPEERQIAHLPL 141 ++S PAS A PE++ +LL S+ LP H PL Sbjct: 404 LGNWRASPPASAAAPPELQPHSESSDLLYTPSYSLPFSYHYGHFPL 449 >gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo sapiens] Length = 834 Score = 30.0 bits (66), Expect = 1.3 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 6/125 (4%) Query: 52 APSALPKATRKALGTVN-RATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 APS +P KA T+ T K T+ P + SF T+ T + + PA+ A Sbjct: 251 APSMVPATDTKAPPTLQAETTTKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 308 Query: 111 YPEIEKFFPFNLLDFESFDLPEERQIAHLP--LSGVPLMILDEEGELEKLFQ-LGPPSPV 167 P + F + P ++ S +P + +F +GPP+ V Sbjct: 309 SPMFKPIFTAPPKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 368 Query: 168 KMPSP 172 +P+P Sbjct: 369 PLPAP 373 >gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f [Homo sapiens] Length = 1412 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 51 DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 + P+A+ A K+LG + +A S GP ++ P K + ++SS +SD A Sbjct: 482 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 541 Query: 111 YPE 113 E Sbjct: 542 DSE 544 >gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e [Homo sapiens] Length = 1451 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 51 DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 + P+A+ A K+LG + +A S GP ++ P K + ++SS +SD A Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618 Query: 111 YPE 113 E Sbjct: 619 DSE 621 >gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d [Homo sapiens] Length = 1488 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 51 DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 + P+A+ A K+LG + +A S GP ++ P K + ++SS +SD A Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618 Query: 111 YPE 113 E Sbjct: 619 DSE 621 >gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo sapiens] Length = 1411 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 51 DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 + P+A+ A K+LG + +A S GP ++ P K + ++SS +SD A Sbjct: 482 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 541 Query: 111 YPE 113 E Sbjct: 542 DSE 544 >gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo sapiens] Length = 1450 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 51 DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 + P+A+ A K+LG + +A S GP ++ P K + ++SS +SD A Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618 Query: 111 YPE 113 E Sbjct: 619 DSE 621 >gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c [Homo sapiens] Length = 958 Score = 29.6 bits (65), Expect = 1.7 Identities = 18/63 (28%), Positives = 30/63 (47%) Query: 51 DAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 + P+A+ A K+LG + +A S GP ++ P K + ++SS +SD A Sbjct: 559 EVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEESSDSA 618 Query: 111 YPE 113 E Sbjct: 619 DSE 621 >gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] Length = 3664 Score = 29.3 bits (64), Expect = 2.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Query: 72 EKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPE 113 EK ++N PR + Q K EK +T S A+D +PE Sbjct: 1850 EKLKRSNSPRGEAQKLLELKMEAEKITRTASKNSAADLEHPE 1891 >gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] Length = 987 Score = 29.3 bits (64), Expect = 2.2 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 6/125 (4%) Query: 52 APSALPKATRKALGTVNRATE-KSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 APS +P KA T+ T K T+ P + SF T+ T + + PA+ A Sbjct: 402 APSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 459 Query: 111 YPEIEKFFPFNLLDFESFDLPEERQI-AHLPLSG-VPLMILDEEGELEKLFQ-LGPPSPV 167 P + F + P + A P S +P + +F +GPP+ V Sbjct: 460 SPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 519 Query: 168 KMPSP 172 +P+P Sbjct: 520 PLPAP 524 >gi|148612857 sickle tail isoform 3 [Homo sapiens] Length = 1309 Score = 28.9 bits (63), Expect = 2.8 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 36 DGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTE 95 D I L G + +P + + GT+++ ++S K PR+ +Q + SAKK Sbjct: 1096 DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS-KLQDPRQYRQANGSAKKSGG 1154 Query: 96 KTVKTKSSVPAS 107 T S+PAS Sbjct: 1155 DFKPTSPSLPAS 1166 >gi|148612813 sickle tail isoform 2 [Homo sapiens] Length = 1264 Score = 28.9 bits (63), Expect = 2.8 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Query: 36 DGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTE 95 D I L G + +P + + GT+++ ++S K PR+ +Q + SAKK Sbjct: 1051 DKIMAELQGSSGAPQTSRMPVPMSAKNRPGTLDKPGKQS-KLQDPRQYRQANGSAKKSGG 1109 Query: 96 KTVKTKSSVPAS 107 T S+PAS Sbjct: 1110 DFKPTSPSLPAS 1121 >gi|6912494 microtubule-associated protein, RP/EB family, member 1 [Homo sapiens] Length = 268 Score = 28.9 bits (63), Expect = 2.8 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%) Query: 41 VLTRRFGKTYDAPSALPKAT---RKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKT 97 V R+ +T APS + A +K L + + A ++ + T Q + +A K Sbjct: 127 VAARQGQETAVAPSLVAPALNKPKKPLTSSSAAPQRPIST-------QRTAAAPKAGPGV 179 Query: 98 VKTKSSVPASDDAYPEIEKFFPFNLLDFESFDLPEERQIAHLPLSGVPLMILDEEGELEK 157 V+ V DD E+ + N+L DL +ER L + L+ + EGE + Sbjct: 180 VRKNPGVGNGDDEAAELMQ--QVNVLKLTVEDLEKERDFYFGKLRNIELICQENEGENDP 237 Query: 158 LFQ 160 + Q Sbjct: 238 VLQ 240 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 28.9 bits (63), Expect = 2.8 Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 4/91 (4%) Query: 25 KLESRPSIKALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTN----GP 80 KLE R + K + Q T+ G P +LPK K T+ + P Sbjct: 1275 KLEGRVAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEP 1334 Query: 81 RKQKQPSFSAKKMTEKTVKTKSSVPASDDAY 111 K+K K T + + KS SD Y Sbjct: 1335 GKEKTEKEDDKSDTSSSQQPKSPQGLSDTGY 1365 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 28.9 bits (63), Expect = 2.8 Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 4/91 (4%) Query: 25 KLESRPSIKALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTN----GP 80 KLE R + K + Q T+ G P +LPK K T+ + P Sbjct: 1275 KLEGRVAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDKTTKTIKEQPQPPCTAKPDQVEP 1334 Query: 81 RKQKQPSFSAKKMTEKTVKTKSSVPASDDAY 111 K+K K T + + KS SD Y Sbjct: 1335 GKEKTEKEDDKSDTSSSQQPKSPQGLSDTGY 1365 >gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] Length = 984 Score = 28.9 bits (63), Expect = 2.8 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 6/125 (4%) Query: 52 APSALPKATRKALGTVNRATE-KSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDA 110 APS +P KA T+ T K T+ P + SF T+ T + + PA+ A Sbjct: 402 APSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG--TQNTSPSSPAAPAASSA 459 Query: 111 YPEIEKFFPFNLLDFESFDLPEERQI-AHLPLSG-VPLMILDEEGELEKLFQ-LGPPSPV 167 P + F + P + A P S +P + +F +GPP+ V Sbjct: 460 PPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPASV 519 Query: 168 KMPSP 172 +P+P Sbjct: 520 PLPAP 524 >gi|50843820 sickle tail isoform 1 [Homo sapiens] Length = 1943 Score = 28.5 bits (62), Expect = 3.7 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 56 LPKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPAS 107 +P + + GT+++ ++S K PR+ +Q + SAKK T S+PAS Sbjct: 1750 VPMSAKNRPGTLDKPGKQS-KLQDPRQYRQANGSAKKSGGDFKPTSPSLPAS 1800 >gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] Length = 3957 Score = 28.5 bits (62), Expect = 3.7 Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 16/124 (12%) Query: 5 IYVDKEIGEPGTRVAAKDVLKLESRPSIK----ALDGISQVLTRRFGKTYDAPSALPKAT 60 +++D+ + P D +K E P++ ALDG S+ L S + Sbjct: 2164 LHLDQVLTSPFNTTFPLDYMKDEFLPALSLQSGALDGSSESLKNEGVAGSPCGSLME--- 2220 Query: 61 RKALGTVNRATEKSVKTNGPRKQKQPS-----FSAKKMTEKTVKTKSSVPASDDAYPEIE 115 GT ++E+S K G + + S FS KK E+T +TK S E Sbjct: 2221 ----GTPQISSEESYKHEGLAETPETSPESLSFSPKKSEEQTGETKESTKTETTTEIRSE 2276 Query: 116 KFFP 119 K P Sbjct: 2277 KEHP 2280 >gi|32528306 replication factor C large subunit [Homo sapiens] Length = 1147 Score = 28.1 bits (61), Expect = 4.8 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 57 PKATRKALGTVNRATEKSVKTNGP--RKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPE 113 PKA+ K L + R E S K P K+K+ + K T+ KTKSS + PE Sbjct: 313 PKASSK-LAIMKRKEESSYKEIEPVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPE 370 >gi|83367077 mucin 16 [Homo sapiens] Length = 14507 Score = 28.1 bits (61), Expect = 4.8 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 4/97 (4%) Query: 11 IGEPGTRVAAKDVLKLESRPSIKALDGISQ--VLTRRFGKTYDAPSALPKATRKALGTVN 68 I GT ++ D + S +A+ +S ++T + P AT + GT+ Sbjct: 8454 ISSRGTSMSGPDQFTISPDISTEAITRLSTSPIMTESAESAITIETGSPGATSE--GTLT 8511 Query: 69 RATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVP 105 T + +G P FS +MT +T VP Sbjct: 8512 LDTSTTTFWSGTHSTASPGFSHSEMTTLMSRTPGDVP 8548 >gi|197927454 DEK oncogene isoform 2 [Homo sapiens] Length = 341 Score = 28.1 bits (61), Expect = 4.8 Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 57 PKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEK 116 PK T K +AT KS K+ K+ S K + + K +S S D P I+K Sbjct: 222 PKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKK 281 >gi|4503249 DEK oncogene isoform 1 [Homo sapiens] Length = 375 Score = 28.1 bits (61), Expect = 4.8 Identities = 19/60 (31%), Positives = 26/60 (43%) Query: 57 PKATRKALGTVNRATEKSVKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDDAYPEIEK 116 PK T K +AT KS K+ K+ S K + + K +S S D P I+K Sbjct: 256 PKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKESESEDSSDDEPLIKK 315 >gi|46399200 testis-specific bromodomain protein [Homo sapiens] Length = 947 Score = 28.1 bits (61), Expect = 4.8 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 17/119 (14%) Query: 18 VAAKDVLKLESRPSI---KALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKS 74 V K+ +K ++ +I A + S T + K + PS PK + L V A+ S Sbjct: 140 VGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNS 199 Query: 75 VKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDD----------AYPEIEKFFPFNLL 123 + K K+ + T S+V AS + A P I++ P N+L Sbjct: 200 SSQTAAQVTK----GVKRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVL 254 >gi|46399198 testis-specific bromodomain protein [Homo sapiens] Length = 947 Score = 28.1 bits (61), Expect = 4.8 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 17/119 (14%) Query: 18 VAAKDVLKLESRPSI---KALDGISQVLTRRFGKTYDAPSALPKATRKALGTVNRATEKS 74 V K+ +K ++ +I A + S T + K + PS PK + L V A+ S Sbjct: 140 VGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPSVFPKTSISPLNVVQGASVNS 199 Query: 75 VKTNGPRKQKQPSFSAKKMTEKTVKTKSSVPASDD----------AYPEIEKFFPFNLL 123 + K K+ + T S+V AS + A P I++ P N+L Sbjct: 200 SSQTAAQVTK----GVKRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVL 254 >gi|124430752 kinesin family member 26B [Homo sapiens] Length = 2108 Score = 28.1 bits (61), Expect = 4.8 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 42 LTRRFGKTYDAPSALPKATRKALGTVNRATEKSVKTNGPRKQ--KQPSFSAKKMTEKTVK 99 L R G + + A PKA + + V+R S + GP K SFS K + + + Sbjct: 1710 LGRSAGTSPPSSGASPKAGQSKISAVSRLLLASPRARGPSASTTKTLSFSTKSLPQAVGQ 1769 Query: 100 TKSSVP 105 SS P Sbjct: 1770 GSSSPP 1775 >gi|156564384 deltex 2 isoform a [Homo sapiens] Length = 622 Score = 27.7 bits (60), Expect = 6.3 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 12/91 (13%) Query: 33 KALDGISQVLTRRFGKTYDAPSA----LPKATR---KALGTVNRATEKSVKTNGPRKQKQ 85 +AL G++ VL G A P A+R K+ G+V R + SVK P+ + + Sbjct: 333 QALAGMTSVLMSAIGLPVCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPE 392 Query: 86 PSFSAKKMTEKTVKTKSSVPASDDAYPEIEK 116 P K TE+ VP +D +EK Sbjct: 393 PEQVIKNYTEEL-----KVPPDEDCIICMEK 418 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.132 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,870,944 Number of Sequences: 37866 Number of extensions: 366438 Number of successful extensions: 1085 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1066 Number of HSP's gapped (non-prelim): 47 length of query: 191 length of database: 18,247,518 effective HSP length: 96 effective length of query: 95 effective length of database: 14,612,382 effective search space: 1388176290 effective search space used: 1388176290 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.