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Search of human proteins with 154240732
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154240732 hypothetical protein LOC201243 [Homo sapiens]
(501 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154240732 hypothetical protein LOC201243 [Homo sapiens] 1066 0.0
gi|116268095 spermatid maturation 1 [Homo sapiens] 57 5e-08
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 47 4e-05
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 43 8e-04
gi|91208420 bassoon protein [Homo sapiens] 40 0.006
gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho... 39 0.014
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 37 0.032
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 37 0.032
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 37 0.032
gi|146134388 YLP motif containing 1 [Homo sapiens] 37 0.032
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 37 0.042
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 37 0.042
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 37 0.042
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot... 37 0.042
gi|24431935 reticulon 4 isoform A [Homo sapiens] 37 0.055
gi|192807298 calcium channel, voltage-dependent, L type, alpha 1... 36 0.071
gi|239753475 PREDICTED: hypothetical protein [Homo sapiens] 36 0.071
gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo ... 36 0.071
gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo ... 36 0.071
gi|38176300 nestin [Homo sapiens] 36 0.093
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens] 36 0.093
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 36 0.093
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens] 36 0.093
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ... 36 0.093
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 36 0.093
gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens] 36 0.093
gi|192807300 calcium channel, voltage-dependent, L type, alpha 1... 35 0.12
gi|4502527 calcium channel, voltage-dependent, L type, alpha 1D ... 35 0.12
gi|7019435 interleukin 17C [Homo sapiens] 35 0.12
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 35 0.12
>gi|154240732 hypothetical protein LOC201243 [Homo sapiens]
Length = 501
Score = 1066 bits (2756), Expect = 0.0
Identities = 501/501 (100%), Positives = 501/501 (100%)
Query: 1 MENQLWHNTVRCCNQYQESPHDAEDILLLLLGLIVLVNIGINVATMMWHGLQNALDKMID 60
MENQLWHNTVRCCNQYQESPHDAEDILLLLLGLIVLVNIGINVATMMWHGLQNALDKMID
Sbjct: 1 MENQLWHNTVRCCNQYQESPHDAEDILLLLLGLIVLVNIGINVATMMWHGLQNALDKMID 60
Query: 61 WATQKNEIQASESPPSGPPDKAQDVHIHCILDPVQVKMSRPTQYSSFSCHHFSNHHSSSL 120
WATQKNEIQASESPPSGPPDKAQDVHIHCILDPVQVKMSRPTQYSSFSCHHFSNHHSSSL
Sbjct: 61 WATQKNEIQASESPPSGPPDKAQDVHIHCILDPVQVKMSRPTQYSSFSCHHFSNHHSSSL 120
Query: 121 LRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPHRSQKMSQLHRVPFFDQED 180
LRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPHRSQKMSQLHRVPFFDQED
Sbjct: 121 LRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPHRSQKMSQLHRVPFFDQED 180
Query: 181 PDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQGGILASLPPPSLYLSPEL 240
PDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQGGILASLPPPSLYLSPEL
Sbjct: 181 PDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQGGILASLPPPSLYLSPEL 240
Query: 241 RCMPKRVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPPPHRLPPNPSWVPVGHSPY 300
RCMPKRVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPPPHRLPPNPSWVPVGHSPY
Sbjct: 241 RCMPKRVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPPPHRLPPNPSWVPVGHSPY 300
Query: 301 PSVGWMLYDSWDQRRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQS 360
PSVGWMLYDSWDQRRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQS
Sbjct: 301 PSVGWMLYDSWDQRRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQS 360
Query: 361 HRSPHPSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSS 420
HRSPHPSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSS
Sbjct: 361 HRSPHPSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSS 420
Query: 421 VLVPHSSQPWPKVQAADPAPPPTMFVPLSRNPGGNANYQVYDSLELKRQVQKSRARSSSL 480
VLVPHSSQPWPKVQAADPAPPPTMFVPLSRNPGGNANYQVYDSLELKRQVQKSRARSSSL
Sbjct: 421 VLVPHSSQPWPKVQAADPAPPPTMFVPLSRNPGGNANYQVYDSLELKRQVQKSRARSSSL 480
Query: 481 PPASTSTLRPSLHRSQTEKLN 501
PPASTSTLRPSLHRSQTEKLN
Sbjct: 481 PPASTSTLRPSLHRSQTEKLN 501
>gi|116268095 spermatid maturation 1 [Homo sapiens]
Length = 309
Score = 56.6 bits (135), Expect = 5e-08
Identities = 79/330 (23%), Positives = 118/330 (35%), Gaps = 92/330 (27%)
Query: 6 WHNTVRCCNQYQESPHDAEDILLLLLGLIVLVNIGINVATMMWHGLQNALDKMI-DWATQ 64
+HN CN S D + +LLLLGLI+ +NI IN+ T++W + L ++ D +
Sbjct: 14 YHN----CNS--NSCQDLGNSVLLLLGLIICINISINIVTLLWSRFRGVLYQVFHDTICE 67
Query: 65 KNEIQASESPPSGPPDKAQD---VHIHCILDPVQVKMSRPTQYSSFSCHHFSNHHSSSLL 121
K ++S P K Q VH+ C +DPV + +S P +
Sbjct: 68 KEAPKSSLLRKQTQPPKKQSSPAVHLRCTMDPVMMTVSPPPAH----------------- 110
Query: 122 RCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPHRSQKMSQLHRVPFFDQEDP 181
R RRR R C P + PH + + H VP ED
Sbjct: 111 ----RHRRRGSPTRCAHCPVAWAPDTDDEKPHQYPAICSYHWD--------VP----ED- 153
Query: 182 DSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQGGILASLPPPSLYLSPELR 241
W GF G W PP ++ P +
Sbjct: 154 ---------------------WEGFQH------TQGTWVPWSQDAPESPPQTIRFQPTVE 186
Query: 242 CMPKRVEARSELRLQSY---------------GRHGSQSRLWGNVEAEQWASSPPPPHRL 286
P + SEL L++Y ++G + + EA Q+ P P
Sbjct: 187 ERPLKTGIWSELGLRAYVYPVNPPPPSPEAPSHKNGGEGAV-PEAEAAQYQPVPAP---- 241
Query: 287 PPNPSWVPVGHSPYPSVGWMLYDSWDQRRR 316
P+ +P S + S G ++YD+ D RRR
Sbjct: 242 TLGPAVIP-EFSRHRSSGRIVYDARDMRRR 270
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 47.0 bits (110), Expect = 4e-05
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 50/258 (19%)
Query: 278 SSPPPPHRLPPNPSWVP---VGHSPYPSVGWMLYDSWDQRRRGTEGFERPPASVS---RN 331
+SPPPP + +PS P V HSP P ++R + +R S+S R
Sbjct: 615 ASPPPPPKRRASPSPPPKRRVSHSPPP------------KQRSSPVTKRRSPSLSSKHRK 662
Query: 332 ARPEAQGCREHHSPQSHQQSLLG-------------------HAYGQSHRSPHPSTEPLG 372
++ RE SPQ +++ + Q +SP PST P+
Sbjct: 663 GSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIR 722
Query: 373 YSSQ--DPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHS-SQP 429
S+ +P+++++ A+ +++ R +++S S++ E + ++ PAP S + S S
Sbjct: 723 RVSRTPEPKKIKKAASPSPQSV---RRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTN 779
Query: 430 W----PKVQAADPAPPPTMFVPLSRNPGGNANYQVYD---SLELKRQVQKSRARSSSLPP 482
W P +A P P P+ + GG + D + K + K + ++
Sbjct: 780 WSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAA 839
Query: 483 ASTSTLRPSLHRSQTEKL 500
A+ + + P+ + T L
Sbjct: 840 AAAAAVTPAAIAAATTTL 857
Score = 32.7 bits (73), Expect = 0.79
Identities = 59/233 (25%), Positives = 79/233 (33%), Gaps = 38/233 (16%)
Query: 230 PPPSLYLSPELRCMPKRVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPPPHRLPPN 289
PPP SP + + ++R + S GR + E + SP P P
Sbjct: 407 PPPKTRHSPTPQQSNRTRKSRVSV---SPGRTSGKVTKHKGTEKRE---SPSPA----PK 456
Query: 290 PSWVPVGHSPYPSVGWMLY-DSWDQRRR-----GTEGFERPPASVSRNARPEAQ------ 337
P V + S G M DS QRR+ + +S S + RP+
Sbjct: 457 PRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGE 516
Query: 338 -GCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGY---SSQDPREVRRRAADWAEALP 393
G R HSP + S R T P G S P RRR+ A
Sbjct: 517 VGRRRRHSPS--------RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPR 568
Query: 394 AWRPLTTSASLTVLDEASHQRTPAPSSVLVP----HSSQPWPKVQAADPAPPP 442
R T +R+P+P P +S P PK + A P PPP
Sbjct: 569 RRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPP 621
Score = 32.0 bits (71), Expect = 1.3
Identities = 56/256 (21%), Positives = 81/256 (31%), Gaps = 54/256 (21%)
Query: 246 RVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPPPHRLPPNPSWVPVGHSPYPSVGW 305
R +RS + RH S+SR + P P R PP
Sbjct: 287 RTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPR---------------- 330
Query: 306 MLYDSWDQRRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQSHRSPH 365
PP R +R + R + S S S RS
Sbjct: 331 ----------------RMPPPPRHRRSRSPVRRRRRSSASLSGSSS-----SSSSSRSRS 369
Query: 366 PSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPS------ 419
P +P +S PR+ RR + A P R S T + H TP S
Sbjct: 370 PPKKPPKRTSSPPRKTRRLS---PSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKS 426
Query: 420 --SVLVPHSS------QPWPKVQAADPAPPPTMFVPLSRNPGGNANYQVYDSLELKRQVQ 471
SV +S + K ++ PAP P DS++ +RQ +
Sbjct: 427 RVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYR 486
Query: 472 KSRARSSSLPPASTST 487
+ +SSS +S+S+
Sbjct: 487 RQNQQSSSDSGSSSSS 502
Score = 30.4 bits (67), Expect = 3.9
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 14/164 (8%)
Query: 327 SVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREVRRRAA 386
S SR+A P + ++ SP+ ++ + RSP P+ P + P RR
Sbjct: 524 SPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT-- 581
Query: 387 DWAEALPAWRPLTTSASLTVLDEASHQR-TPAPSSVLVPHSSQPWPKVQAADPAPPPTMF 445
P+ P S S +R +P+P S P PK + A P+PPP
Sbjct: 582 ------PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPK-RRASPSPPPKRR 634
Query: 446 VPLSRNPGGNANYQVYDSLELKRQVQKSRARSSSLPPASTSTLR 489
V S P ++ + + S+ R S P ST R
Sbjct: 635 VSHSPPPKQRSS----PVTKRRSPSLSSKHRKGSSPSRSTREAR 674
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 42.7 bits (99), Expect = 8e-04
Identities = 60/234 (25%), Positives = 89/234 (38%), Gaps = 37/234 (15%)
Query: 269 GNVEAEQWASSPPPPHRLPPNPSWVPVGHS-PYPSVGWMLYDSWDQRRRGTEGFERPPAS 327
G A W++ PPPP LPP +G + P P + RGT PP +
Sbjct: 987 GPQHAPFWSTVPPPP--LPP----ASIGRAVPQPKM----------ESRGTPA--GPPEN 1028
Query: 328 VS--RNARPEAQGCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREVRRRA 385
V A P + G H +PQ+ + SPHP + + Q P +++ A
Sbjct: 1029 VLPLSMAPPLSLGLPGHGAPQTEPTKV---EVKPVPASPHPKHK-VSALVQSP-QMKALA 1083
Query: 386 ADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHSSQPW-PKVQAADPAPPPTM 444
AE + P + + ++ P P++ VP Q PK+ A PA +
Sbjct: 1084 CVSAEGVTVEEPASERLKPETQETRPREKPPLPATKAVPTPRQSTVPKLPAVHPARLRKL 1143
Query: 445 -FVPLSRNPGGNANYQVY---------DSLELKRQVQKSRARSSSLPPASTSTL 488
F+P R G Q + D L Q +KS A+ PPA +L
Sbjct: 1144 SFLPTPRTQGSEDVVQAFISEIGIEASDLSSLLEQFEKSEAKKECPPPAPADSL 1197
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 39.7 bits (91), Expect = 0.006
Identities = 49/224 (21%), Positives = 74/224 (33%), Gaps = 35/224 (15%)
Query: 231 PPSLYLSPELRCMPKRVEARSELRLQSYGRHGSQ------SRLWGNVEAEQWASSPPPPH 284
PP L P P R + E R +GRH + R A PH
Sbjct: 3623 PPEEGLWPHDEGGPGRHASAKEHRHGDHGRHSGRHTGEEPGRRAAKPHARDLGRHEARPH 3682
Query: 285 RLPPNPSWVPVGHSP---------YPSVGWMLYDSWDQRRRGTEGFERPPASVSRNARPE 335
P + +P P PS Y ++G+ PA++ A P+
Sbjct: 3683 SQPSSAPAMPKKGQPGYPSSAEYSQPSRASSAYHHASDSKKGSRQAHSGPAALQSKAEPQ 3742
Query: 336 AQ----------GCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREVRRRA 385
AQ G ++ SP S Q G + R P + G Q P++ +A
Sbjct: 3743 AQPQLQGRQAAPGPQQSQSPSSRQ-----IPSGAASRQPQTQQQQQGLGLQPPQQALTQA 3797
Query: 386 ADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHSSQP 429
++ P TT S + + + P PS+ P + P
Sbjct: 3798 RLQQQSQP-----TTRGSAPAASQPAGKPQPGPSTATGPQPAGP 3836
>gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo
sapiens]
Length = 1075
Score = 38.5 bits (88), Expect = 0.014
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 360 SHRSPHPSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPS 419
+H P P P + P+ R + +P T+ T TPAP
Sbjct: 528 THTKPAPKQTPR--APPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAPK 585
Query: 420 SVLVPHSSQPWPKVQAADPAPPPTMFVP 447
VL+PH +P+P+V ++PAP T +P
Sbjct: 586 DVLLPH--KPYPEVSQSEPAPLETRGIP 611
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 37.4 bits (85), Expect = 0.032
Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 4/128 (3%)
Query: 323 RPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQSHRSPHPST-EPLGYSSQDPREV 381
R P++ RP ++ +P S A G HPS +P G + P +V
Sbjct: 226 RRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQV 285
Query: 382 RRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHSSQPWPKVQAADPAPP 441
D A PA PL++S T A+ Q P+ PHSS ++ P P
Sbjct: 286 TPPRKD---AAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAP 342
Query: 442 PTMFVPLS 449
P+ P S
Sbjct: 343 PSPSAPPS 350
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 37.4 bits (85), Expect = 0.032
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 99 SRPTQYSSFS-----CHHFSNHHSSSLLRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPH 153
SR +Y S S H + H S R VRR R R R RRR + ++R + R +P
Sbjct: 769 SRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREE-RSVPT 827
Query: 154 SHSVFRNPHRSQKMSQ 169
++ V R+P S+K ++
Sbjct: 828 AYRVSRSPGASRKRTR 843
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 37.4 bits (85), Expect = 0.032
Identities = 84/387 (21%), Positives = 118/387 (30%), Gaps = 82/387 (21%)
Query: 126 RRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPHR---------------SQKMSQL 170
RR+RRHR +C ++ + R PH+ S R HR S S
Sbjct: 219 RRKRRHRSRSSKCKRKEKNKEKKR--PHTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPS 276
Query: 171 HRVPFFDQEDPDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQGGILASLP 230
P E + + P P GWG + G G G + G S
Sbjct: 277 RLSPKHRDEGRKTGSQRSSGSRSPSPS-GGSGWGSPQRNGGSGQRSGAHGGRPGSAHS-- 333
Query: 231 PPSLYLSPELRCMPKRVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPPPHRLPPNP 290
PP SP R K A++P PP R +P
Sbjct: 334 PPDKPSSPSPRVRDKAA-----------------------------AAAPTPPARGKESP 364
Query: 291 SWVPVGHSPYPSVGWMLYDSWDQRRRGTEGFERPPASVS---RNARPEAQGCREHHSPQS 347
S P G +RRR R +S S R R + S +S
Sbjct: 365 S--PRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRS 422
Query: 348 HQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVL 407
++ G +P P EP R + E P RP +TS S
Sbjct: 423 LSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAK-----ERPPRARPASTSPS---- 473
Query: 408 DEASHQRTPAPSSVLVPHSSQPWPKVQAA-----------------DPAPPPTMFVPLSR 450
+H R P S P P+ ++ P+ P+ PLSR
Sbjct: 474 -PGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSR 532
Query: 451 NPGGNANYQVYDSLELKRQVQKSRARS 477
+ G + + E R ++SR+ S
Sbjct: 533 DKDGEGRAR-HSEAEATRARRRSRSYS 558
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 37.4 bits (85), Expect = 0.032
Identities = 74/341 (21%), Positives = 113/341 (33%), Gaps = 89/341 (26%)
Query: 163 RSQKMSQLHRVPFFDQEDPDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQ 222
R Q ++QL ++ Q+ L+ P P P P GG+ G W
Sbjct: 54 REQHLAQLQQLQQMHQKQMQCVLQPHHLPPPPLPPPPVMPGGGY----------GDWQ-- 101
Query: 223 GGILASLPPPSLYLSPELRCMPKRVEARSELRLQSYGRHGSQSRLWGNVEAEQWASSPPP 282
PPP P + + + + + ++ + R G + +E+ + PP
Sbjct: 102 -------PPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPESPPVPP 154
Query: 283 PHRLPPNPSWVPVGHSP---YPSVGWMLYDSWDQRRRGTEGFERPPASVSRNARPEAQ-- 337
+PP+ S++P P YP Y PPA S + P +Q
Sbjct: 155 GSYMPPSQSYMPPPQPPPSYYPPTSSQPY--------------LPPAQPSPSQSPPSQSY 200
Query: 338 ---------GCREHHSPQSHQQSLL------------GHAYGQSHRSPHPSTEPLGYSS- 375
S SH QS L GH+ Q P PS P ++
Sbjct: 201 LAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTV 260
Query: 376 -QDPRE--VRRRAADWAEALPAWRPLTTS----------------ASLTVLDEASHQR-- 414
Q+P E + ++ + +A P P T + T + H++
Sbjct: 261 QQEPLESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGP 320
Query: 415 -----TPAP--SSVLVPHSSQ-PWPKVQAADPAPPPTMFVP 447
TP P V VP +SQ P P PPP VP
Sbjct: 321 VVAKDTPEPVKEEVTVPATSQVPESPSSEEPPLPPPNEEVP 361
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 37.0 bits (84), Expect = 0.042
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 322 ERPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREV 381
E PP S + P + SP+ Q L G +R H + +G ++P+
Sbjct: 1448 ENPPKS----STPHTPVQHGYLSPKPPSQQL-----GSPYRPHHSQSPQVGTPQREPQ-- 1496
Query: 382 RRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHSSQPWPKVQAADPAPP 441
R A+ LPA TS +L Q SS +Q A P PP
Sbjct: 1497 -RNFYPAAQNLPANTQQATSGTLFT------QTPSGQSSATYSQFNQQSLNSTAPPPPPP 1549
Query: 442 PTMFVPLSRNPGGNANYQVYDSLE--LKRQVQKSRARSSSLPPASTSTLRPSLH 493
P +N +AN+Q Y+ L+ L +Q + + +LP ++ P H
Sbjct: 1550 PPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGPNQALPGTTSQQTVPGHH 1603
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 37.0 bits (84), Expect = 0.042
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 322 ERPPASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREV 381
E PP S + P + SP+ Q L G +R H + +G ++P+
Sbjct: 1448 ENPPKS----STPHTPVQHGYLSPKPPSQQL-----GSPYRPHHSQSPQVGTPQREPQ-- 1496
Query: 382 RRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHSSQPWPKVQAADPAPP 441
R A+ LPA TS +L Q SS +Q A P PP
Sbjct: 1497 -RNFYPAAQNLPANTQQATSGTLFT------QTPSGQSSATYSQFNQQSLNSTAPPPPPP 1549
Query: 442 PTMFVPLSRNPGGNANYQVYDSLE--LKRQVQKSRARSSSLPPASTSTLRPSLH 493
P +N +AN+Q Y+ L+ L +Q + + +LP ++ P H
Sbjct: 1550 PPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGPNQALPGTTSQQTVPGHH 1603
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 37.0 bits (84), Expect = 0.042
Identities = 43/172 (25%), Positives = 60/172 (34%), Gaps = 25/172 (14%)
Query: 281 PPPHRLPPNPSWVPVGHSPYPSVGWMLYD-----SWDQRRRGTEGFERPPASVSRNARPE 335
PPP L P VP G P+ G L+D DQ E F+ P ++ +
Sbjct: 644 PPPGPLSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQFEEPAE-FKILPDGLANIMKML 702
Query: 336 AQGCREHHSPQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQDPREVRRRAADWAEALPAW 395
+ R+ Q H+ + +P P + S Q P A A+
Sbjct: 703 DESIRKEEEQQQHEAGV----------APQPPLKEPFASLQSPFPTDTAPTTTAPAVAVT 752
Query: 396 RPLTTSASLTVLDEASHQRTPA----PSSVLVPHSSQPWPKVQAADPAPPPT 443
TT+ + T E + PA P P SQP P P PPP+
Sbjct: 753 TTTTTTTTTTATQEEEKKPPPALPPPPPLAKFPPPSQPQP-----PPPPPPS 799
Score = 31.2 bits (69), Expect = 2.3
Identities = 62/234 (26%), Positives = 80/234 (34%), Gaps = 44/234 (18%)
Query: 253 LRLQSYGR-----HGSQSRLWGNVEAEQWASSPPPPHRLPPNPSWVPVGHSPYPSVGWML 307
L + +GR H S+ G A S PP P PP P P P P W+
Sbjct: 430 LEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPP--CPRLLRPPPPPAWLK 487
Query: 308 YDSWDQRRR----------GTEGFER--PPASVSRN------ARPEAQGCREHHSPQSHQ 349
+ R GTEG R PP R A + G ++ H+P +
Sbjct: 488 GPACRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPP 547
Query: 350 QSLLGHAYGQSHRSPHPSTEPLGYSSQDPREVRRRAAD--WAEALPAWRPL------TTS 401
+ S+ H S+ P G S P R+ D PA P T
Sbjct: 548 TPTTSSS--NSNSGSH-SSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLTL 604
Query: 402 ASLTVLDEASHQRTPAPSSVLVPHSSQP---WPKVQAADPAPPPTMFVPLSRNP 452
A + HQ T S P S +P +PK P PPP PLS+ P
Sbjct: 605 ALPPAPPSSCHQNT--SGSFRRPESPRPRVSFPKTPEVGPGPPPG---PLSKAP 653
>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif, 7
preproprotein [Homo sapiens]
Length = 1686
Score = 37.0 bits (84), Expect = 0.042
Identities = 45/191 (23%), Positives = 63/191 (32%), Gaps = 50/191 (26%)
Query: 278 SSPPPPHRLPPNP--SWVPVGHSPY-------PSVGWMLYDSWDQRRRGTEGFERPPASV 328
S PPP + P NP +++P +P PS+ W R T+G + P
Sbjct: 1140 SPPPPSEQTPGNPLINFLPEEDTPIGAPDLGLPSLSWP--------RVSTDGLQTPATPE 1191
Query: 329 SRNARPEAQGCREHHSP-------QSHQQSLLGHAYGQSHRSPHPST-----EPLGYSSQ 376
S+N P + + P + + G H P PS+ P+G +
Sbjct: 1192 SQNDFPVGKDSQSQLPPPWRDRTNEVFKDDEEPKGRGAPHLPPRPSSTLPPLSPVGSTHS 1251
Query: 377 DPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVPHSSQPWPKVQAA 436
P A W AW P A L P S+ WP V A
Sbjct: 1252 SPSP--DVAELWTGGTVAWEP-------------------ALEGGLGPVDSELWPTVGVA 1290
Query: 437 DPAPPPTMFVP 447
PPP +P
Sbjct: 1291 SLLPPPIAPLP 1301
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 36.6 bits (83), Expect = 0.055
Identities = 33/134 (24%), Positives = 51/134 (38%), Gaps = 14/134 (10%)
Query: 362 RSPHPSTEPLGYSSQ---DPREVRRRAADWAEALPAWRPLTTSA----SLTVLDEASHQR 414
R P P+ P+ Q DP V + +PA PL+ +A L DE +
Sbjct: 91 RGPLPAAPPVAPERQPSWDPSPV-------SSTVPAPSPLSAAAVSPSKLPEDDEPPARP 143
Query: 415 TPAPSSVLVPHSSQPWPKVQAADPAPPPTMFVPLSRNPGGNANYQVYDSLELKRQVQKSR 474
P P + + P + W A APP T P R G+ + ++ V +S
Sbjct: 144 PPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLFALPAASEPVIRSS 203
Query: 475 ARSSSLPPASTSTL 488
A + L +T+
Sbjct: 204 AENMDLKEQPGNTI 217
>gi|192807298 calcium channel, voltage-dependent, L type, alpha 1D
subunit isoform c [Homo sapiens]
Length = 2137
Score = 36.2 bits (82), Expect = 0.071
Identities = 47/188 (25%), Positives = 65/188 (34%), Gaps = 33/188 (17%)
Query: 103 QYSSFSCHHFSNHHSSSLLRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNPH 162
++ S + HH S+ H R +R +R +Q P R+ P H FR+PH
Sbjct: 1763 EHVSENGHHSSHKHD--------REPQRRSSVKRSDSGDEQLPTICREDPEIHGYFRDPH 1814
Query: 163 RSQKMSQLHRVPFFDQEDPDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGHQ 222
+ + ED S N + Y +YP R R + H
Sbjct: 1815 CLGEQEYFSSEECY--EDDSSPTWSRQNYGY-YSRYPGRNIDSERPRG--------YHHP 1863
Query: 223 GGILASLPPPSLY---LSPELRCMPKRVEA--RSELRLQSYGRHGSQSRLWGNVEAEQWA 277
G L P Y SP R +P + RS + R SQ E+
Sbjct: 1864 QGFLEDDDSPVCYDSRRSPRRRLLPPTPASHRRSSFNFECLRRQSSQ---------EEVP 1914
Query: 278 SSPPPPHR 285
SSP PHR
Sbjct: 1915 SSPIFPHR 1922
>gi|239753475 PREDICTED: hypothetical protein [Homo sapiens]
Length = 721
Score = 36.2 bits (82), Expect = 0.071
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 228 SLPPPSLYLSPELRCMPKRVEARSELRLQSYGR-----HGSQSRLWGNVEAEQWASSPPP 282
+LP +L + P +P + S+L Q R GS L G+ + ++ + PP
Sbjct: 161 ALPTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPP 220
Query: 283 PHRLPPNPSWVPVG-----------HSPYPSVGWM--LYDSWDQ---RRRGTE-GFERPP 325
H PP P + H P GW+ L +W + R G G+ + P
Sbjct: 221 KHTAPPGPDLTSIRTPASEPPVTGCHPPSGGCGWISRLPRTWTRVAASRWGLHMGWGQRP 280
Query: 326 ASVSRNARPEAQGCREHHSPQSHQQSLL----------GHAYGQSHRSPHPS-TEP 370
++V + C H SP S S+L GH + Q+ R P P T+P
Sbjct: 281 STVLLPLPSSGRPCLHHLSPTS---SILPPQAPGGAPGGHTWAQA-RWPRPGHTDP 332
>gi|239748044 PREDICTED: hypothetical protein XP_002346500 [Homo
sapiens]
Length = 721
Score = 36.2 bits (82), Expect = 0.071
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 228 SLPPPSLYLSPELRCMPKRVEARSELRLQSYGR-----HGSQSRLWGNVEAEQWASSPPP 282
+LP +L + P +P + S+L Q R GS L G+ + ++ + PP
Sbjct: 161 ALPTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPP 220
Query: 283 PHRLPPNPSWVPVG-----------HSPYPSVGWM--LYDSWDQ---RRRGTE-GFERPP 325
H PP P + H P GW+ L +W + R G G+ + P
Sbjct: 221 KHTAPPGPDLTSIRTPASEPPVTGCHPPSGGCGWISRLPRTWTRVAASRWGLHMGWGQRP 280
Query: 326 ASVSRNARPEAQGCREHHSPQSHQQSLL----------GHAYGQSHRSPHPS-TEP 370
++V + C H SP S S+L GH + Q+ R P P T+P
Sbjct: 281 STVLLPLPSSGRPCLHHLSPTS---SILPPQAPGGAPGGHTWAQA-RWPRPGHTDP 332
>gi|239741935 PREDICTED: hypothetical protein XP_002342357 [Homo
sapiens]
Length = 721
Score = 36.2 bits (82), Expect = 0.071
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 228 SLPPPSLYLSPELRCMPKRVEARSELRLQSYGR-----HGSQSRLWGNVEAEQWASSPPP 282
+LP +L + P +P + S+L Q R GS L G+ + ++ + PP
Sbjct: 161 ALPTGTLVVLPHSTYLPPTLRGISDLGSQEGTRWLPPSRGSWKPLNGSNQTQKHEAQKPP 220
Query: 283 PHRLPPNPSWVPVG-----------HSPYPSVGWM--LYDSWDQ---RRRGTE-GFERPP 325
H PP P + H P GW+ L +W + R G G+ + P
Sbjct: 221 KHTAPPGPDLTSIRTPASEPPVTGCHPPSGGCGWISRLPRTWTRVAASRWGLHMGWGQRP 280
Query: 326 ASVSRNARPEAQGCREHHSPQSHQQSLL----------GHAYGQSHRSPHPS-TEP 370
++V + C H SP S S+L GH + Q+ R P P T+P
Sbjct: 281 STVLLPLPSSGRPCLHHLSPTS---SILPPQAPGGAPGGHTWAQA-RWPRPGHTDP 332
>gi|38176300 nestin [Homo sapiens]
Length = 1621
Score = 35.8 bits (81), Expect = 0.093
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 285 RLPPNPSWVPVGHSPYPSVGWMLYDSWDQRRRGTEGFERPPASVSRNARPEAQGCREHHS 344
R P +P W P G P G + WD +EG E PP+ E + R+ S
Sbjct: 1306 RSPTSPRWDPTGEQRPPPQGETGKEGWDPAVLASEGLEAPPSEKEEGEEGEEECGRD--S 1363
Query: 345 PQSHQQSLLGHAYGQSHRSPHPSTEPLGYSSQ 376
S + LG P EPLG Q
Sbjct: 1364 DLSEEFEDLGTEAPFLPGVPGEVAEPLGQVPQ 1395
>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 35.8 bits (81), Expect = 0.093
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 23/125 (18%)
Query: 248 EARSELRLQSY--GRHGSQSRLWGNVEAEQWASSPPPPHR-----LPPNPS----WVPVG 296
E +S+ Q + G GSQ+RLW A W S P P R L P W G
Sbjct: 467 ERQSQAHHQGFVDGHPGSQARLW---LALTWDSPPAPLQRSVWGQLQPQAGGGRGWEGRG 523
Query: 297 HSPYPSVGWMLYDSWDQ-RRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGH 355
+ G WD R GT+G P A P A GC P Q SLL
Sbjct: 524 AGRWARPG----PGWDGGARAGTQGLPLP----GTEAEPGALGCSLSRGPVPRQGSLLSA 575
Query: 356 AYGQS 360
G S
Sbjct: 576 RVGWS 580
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 35.8 bits (81), Expect = 0.093
Identities = 35/119 (29%), Positives = 46/119 (38%), Gaps = 21/119 (17%)
Query: 399 TTSASLTVLDEASHQRTPAPSSVLVPHSS----------QPWPKVQAADPAPPPT--MFV 446
TT++ L H T +P + L P S Q WP + PAPP T FV
Sbjct: 1101 TTASGLLEASTPVHSSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFV 1160
Query: 447 PLSRNPGGN-----ANYQVYDSLELKRQVQKSRARSSSLPPASTSTLRPSLHRSQTEKL 500
LS G+ + S R + + SS + PA+T PS RS T L
Sbjct: 1161 ELSTTSHGSPSSIPTTHFSASSTTFGRSEESTTVHSSPVAPATT----PSPARSTTSGL 1215
>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 35.8 bits (81), Expect = 0.093
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 23/125 (18%)
Query: 248 EARSELRLQSY--GRHGSQSRLWGNVEAEQWASSPPPPHR-----LPPNPS----WVPVG 296
E +S+ Q + G GSQ+RLW A W S P P R L P W G
Sbjct: 467 ERQSQAHHQGFVDGHPGSQARLW---LALTWDSPPAPLQRSVWGQLQPQAGGGRGWEGRG 523
Query: 297 HSPYPSVGWMLYDSWDQ-RRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGH 355
+ G WD R GT+G P A P A GC P Q SLL
Sbjct: 524 AGRWARPG----PGWDGGARAGTQGLPLP----GTEAEPGALGCSLSRGPVPRQGSLLSA 575
Query: 356 AYGQS 360
G S
Sbjct: 576 RVGWS 580
>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
sapiens]
Length = 791
Score = 35.8 bits (81), Expect = 0.093
Identities = 40/125 (32%), Positives = 46/125 (36%), Gaps = 23/125 (18%)
Query: 248 EARSELRLQSY--GRHGSQSRLWGNVEAEQWASSPPPPHR-----LPPNPS----WVPVG 296
E +S+ Q + G GSQ+RLW A W S P P R L P W G
Sbjct: 475 ERQSQAHHQGFVDGHPGSQARLW---LALTWDSPPAPLQRSVWGQLQPQAGGGRGWEGRG 531
Query: 297 HSPYPSVGWMLYDSWDQ-RRRGTEGFERPPASVSRNARPEAQGCREHHSPQSHQQSLLGH 355
+ G WD R GT+G P A P A GC P Q SLL
Sbjct: 532 AGRWARPG----PGWDGGARAGTQGLPLP----GTEAEPGALGCSLSRGPVPRQGSLLSA 583
Query: 356 AYGQS 360
G S
Sbjct: 584 RVGWS 588
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 35.8 bits (81), Expect = 0.093
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 397 PLTTSASLTVLDEASHQRTPAPSSVLV-----PHSSQPWPKVQAADPAP----PPTMFVP 447
P + SA++T ++ TP ++ LV PHS P+ QA P PP M +P
Sbjct: 1833 PYSHSAAVTSYANSASLSTPLSNTGLVQLSQSPHSVPGGPQAQATMTPPPNLTPPPMNLP 1892
Query: 448 ---LSRNPGGNANYQVYDSLELKRQVQKS-----RARSSSLPPASTSTLRPSLHRSQT 497
L RN +N + S L+ Q+ R +S+SL PA+ + RSQT
Sbjct: 1893 PPLLQRNMAA-SNIGISHSQRLQTQIASKGHISMRTKSASLSPAAATHQSQIYGRSQT 1949
>gi|50959191 rho guanine nucleotide exchange factor 5 [Homo sapiens]
Length = 1597
Score = 35.8 bits (81), Expect = 0.093
Identities = 39/119 (32%), Positives = 46/119 (38%), Gaps = 27/119 (22%)
Query: 323 RPPASVSRNARPEAQGCREHHSPQSHQQS----LLGHAYGQSHRS-PHPSTEPLGYSSQD 377
RPPA N+ Q R P SH+ L+G SH P +P YSS
Sbjct: 590 RPPA----NSTGTVQHLRSDSFPGSHRTEQTPDLVGMLLSYSHSELPQRPPKPAIYSSVT 645
Query: 378 PREVRRRAADWAEALPAWRPLTTSASLTVL------DEASHQRTPAPSSVLVPHSSQPW 430
PR RR D++ T SAS T L + S PSS P S QPW
Sbjct: 646 PRRDRRSGRDYS---------TVSASPTALSTLKQDSQESISNLERPSS---PPSIQPW 692
>gi|192807300 calcium channel, voltage-dependent, L type, alpha 1D
subunit isoform b [Homo sapiens]
Length = 2161
Score = 35.4 bits (80), Expect = 0.12
Identities = 48/189 (25%), Positives = 66/189 (34%), Gaps = 26/189 (13%)
Query: 103 QYSSFSCHHFSNHHSSS-LLRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNP 161
++ S + HH S+ H R +R R + R +Q P R+ P H FR+P
Sbjct: 1778 EHVSENGHHSSHKHDREPQRRSSVKRTRYYETYIRSDSGDEQLPTICREDPEIHGYFRDP 1837
Query: 162 HRSQKMSQLHRVPFFDQEDPDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGH 221
H + + ED S N + Y +YP R R + H
Sbjct: 1838 HCLGEQEYFSSEECY--EDDSSPTWSRQNYGY-YSRYPGRNIDSERPRG--------YHH 1886
Query: 222 QGGILASLPPPSLY---LSPELRCMPKRVEA--RSELRLQSYGRHGSQSRLWGNVEAEQW 276
G L P Y SP R +P + RS + R SQ E+
Sbjct: 1887 PQGFLEDDDSPVCYDSRRSPRRRLLPPTPASHRRSSFNFECLRRQSSQ---------EEV 1937
Query: 277 ASSPPPPHR 285
SSP PHR
Sbjct: 1938 PSSPIFPHR 1946
>gi|4502527 calcium channel, voltage-dependent, L type, alpha 1D
subunit isoform a [Homo sapiens]
Length = 2181
Score = 35.4 bits (80), Expect = 0.12
Identities = 48/189 (25%), Positives = 66/189 (34%), Gaps = 26/189 (13%)
Query: 103 QYSSFSCHHFSNHHSSS-LLRCVRRRRRRHRRCRRRCCNHQQRPQNYRQIPHSHSVFRNP 161
++ S + HH S+ H R +R R + R +Q P R+ P H FR+P
Sbjct: 1798 EHVSENGHHSSHKHDREPQRRSSVKRTRYYETYIRSDSGDEQLPTICREDPEIHGYFRDP 1857
Query: 162 HRSQKMSQLHRVPFFDQEDPDSYLEEEDNLPFPYPKYPRRGWGGFYQRAGLPSNVGLWGH 221
H + + ED S N + Y +YP R R + H
Sbjct: 1858 HCLGEQEYFSSEECY--EDDSSPTWSRQNYGY-YSRYPGRNIDSERPRG--------YHH 1906
Query: 222 QGGILASLPPPSLY---LSPELRCMPKRVEA--RSELRLQSYGRHGSQSRLWGNVEAEQW 276
G L P Y SP R +P + RS + R SQ E+
Sbjct: 1907 PQGFLEDDDSPVCYDSRRSPRRRLLPPTPASHRRSSFNFECLRRQSSQ---------EEV 1957
Query: 277 ASSPPPPHR 285
SSP PHR
Sbjct: 1958 PSSPIFPHR 1966
>gi|7019435 interleukin 17C [Homo sapiens]
Length = 197
Score = 35.4 bits (80), Expect = 0.12
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 21/86 (24%)
Query: 339 CREHHSPQSHQQSLLGHAYGQSHRSPHPSTE---PLGYSSQDPREVRRRAADWAEALPAW 395
C HH P SL GH + SH +PH + PLG Q P + R A W +ALP
Sbjct: 16 CLAHHDP-----SLRGHPH--SHGTPHCYSAEELPLG---QAPPHLLARGAKWGQALPV- 64
Query: 396 RPLTTSASLTVLDEASHQ-RTPAPSS 420
A ++ L+ ASH+ R PS+
Sbjct: 65 ------ALVSSLEAASHRGRHERPSA 84
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 35.4 bits (80), Expect = 0.12
Identities = 56/204 (27%), Positives = 71/204 (34%), Gaps = 57/204 (27%)
Query: 287 PPNP--SWVPVGHSP--------------YPSVGWMLYDSWDQRRRGT-----EGFERPP 325
PPNP SWVP G SP PS G+ + GT +G PP
Sbjct: 551 PPNPANSWVP-GLSPGGSRRPPRSPERTLSPSSGY-------SSQSGTPTLPPKGLAGPP 602
Query: 326 ASVSRNARPEAQGCREHHSPQSHQQSLLGHAYGQSH------RS---------------P 364
AS + P+ + SP + S L S RS P
Sbjct: 603 ASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPP 662
Query: 365 HPSTEPLGYSSQDPREVRRRAADWAEALPAWRPLTTSASLTVLDEASHQRTPAPSSVLVP 424
HP P +S + A A A PA P S + +AS Q P P + L P
Sbjct: 663 HPKV-PAPFSPPPSKPRSPNPAAPALAAPAVVPGPVSTT-----DASPQSPPTPQTTLTP 716
Query: 425 HSSQP-WPKVQAADPAPPPTMFVP 447
P K Q+ P+PPP+ P
Sbjct: 717 LQESPVISKDQSPPPSPPPSYHPP 740
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,322,931
Number of Sequences: 37866
Number of extensions: 1422993
Number of successful extensions: 8010
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 202
Number of HSP's that attempted gapping in prelim test: 7422
Number of HSP's gapped (non-prelim): 750
length of query: 501
length of database: 18,247,518
effective HSP length: 106
effective length of query: 395
effective length of database: 14,233,722
effective search space: 5622320190
effective search space used: 5622320190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.