Guide to the Human Genome
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Name: C17orf74 Sequence: fasta or formatted (501aa) NCBI GI: 154240732
Description:

hypothetical protein LOC201243

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         29           2
 C cysteine            2.0         10           2
 D aspartate           3.6         18           1
 E glutamate           4.8         24           3
 F phenylalanine       1.8          9           2
 G glycine             5.0         25           2
 H histidine           5.6         28           2
 I isoleucine          2.0         10           1
 K lysine              2.2         11           1
 L leucine             8.6         43           5
 M methionine          1.8          9           2
 N asparagine          4.0         20           1
 P proline            11.2         56           4
 Q glutamine           7.0         35           2
 R arginine            9.8         49           6
 S serine             11.6         58           3
 T threonine           2.8         14           2
 V valine              5.0         25           1
 W tryptophan          2.6         13           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC201243 
SPEM1                 0.031   spermatid maturation 1 
SRRM1                 0.021   serine/arginine repetitive matrix 1 
PPRC1                 0.017   peroxisome proliferator-activated receptor gamma, co...
BSN                   0.014   bassoon protein 
ABI3BP                0.013   ABI gene family, member 3 (NESH) binding protein [Ho...
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
SFRS8                 0.012   splicing factor, arginine/serine-rich 8 
FLJ37078              0.012   hypothetical protein LOC222183 
YLPM1                 0.012   YLP motif containing 1 
MLL5                  0.012   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.012   myeloid/lymphoid or mixed-lineage leukemia 5 
KDM6B                 0.012   lysine (K)-specific demethylase 6B 
ADAMTS7               0.012   ADAM metallopeptidase with thrombospondin type 1 mot...
RTN4                  0.012   reticulon 4 isoform A 
CACNA1D               0.011   calcium channel, voltage-dependent, L type, alpha 1...
LOC100293313          0.011   PREDICTED: hypothetical protein 
LOC100290927          0.011   PREDICTED: hypothetical protein XP_002346500 
LOC100289192          0.011   PREDICTED: hypothetical protein XP_002342357 
NES                   0.011   nestin 
LOC100292287          0.011   PREDICTED: hypothetical protein 
MUC12                 0.011   PREDICTED: mucin 12 
LOC100289576          0.011   PREDICTED: hypothetical protein 
LOC100289576          0.011   PREDICTED: hypothetical protein XP_002343622 
MYST4                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
ARHGEF5               0.011   rho guanine nucleotide exchange factor 5 
CACNA1D               0.010   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1D               0.010   calcium channel, voltage-dependent, L type, alpha 1D ...
IL17C                 0.010   interleukin 17C 
KIAA1522              0.010   hypothetical protein LOC57648 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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