Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KIAA1210 Sequence: fasta or formatted (1709aa) NCBI GI: 154090979
Description:

hypothetical protein LOC57481

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9        118           3
 C cysteine            1.2         20           2
 D aspartate           3.8         65           2
 E glutamate           7.8        133           3
 F phenylalanine       3.2         54           2
 G glycine             5.3         91           2
 H histidine           1.8         31           2
 I isoleucine          3.2         55           2
 K lysine              8.3        141           3
 L leucine             7.0        120           4
 M methionine          2.3         39           1
 N asparagine          3.3         57           3
 P proline             8.9        152           2
 Q glutamine           6.6        113           3
 R arginine            4.3         73           4
 S serine             13.9        238           3
 T threonine           5.1         87           3
 V valine              4.9         84           2
 W tryptophan          0.8         14           1
 Y tyrosine            1.4         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57481 
C2orf55               0.015   hypothetical protein LOC343990 
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.012   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.011   Treacher Collins-Franceschetti syndrome 1 isoform a ...
KIAA1211              0.010   hypothetical protein LOC57482 
NOLC1                 0.009   nucleolar and coiled-body phosphoprotein 1 
DMP1                  0.009   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DSPP                  0.008   dentin sialophosphoprotein preproprotein 
FSCB                  0.008   fibrous sheath CABYR binding protein 
DMP1                  0.008   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
ZC3H18                0.008   zinc finger CCCH-type containing 18 
PCLO                  0.008   piccolo isoform 2 
PCLO                  0.008   piccolo isoform 1 
MAP4                  0.007   microtubule-associated protein 4 isoform 2 
TNRC18                0.007   trinucleotide repeat containing 18 
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MAP4                  0.006   microtubule-associated protein 4 isoform 5 
SYNJ1                 0.006   synaptojanin 1 isoform d 
RP1L1                 0.006   retinitis pigmentosa 1-like 1 
SRRM2                 0.006   splicing coactivator subunit SRm300 
SRRM1                 0.006   serine/arginine repetitive matrix 1 
NEFH                  0.006   neurofilament, heavy polypeptide 200kDa 
FAM59A                0.006   hypothetical protein LOC64762 
SETD1A                0.006   SET domain containing 1A 
MUC17                 0.006   mucin 17 
SRCAP                 0.006   Snf2-related CBP activator protein 
RIF1                  0.006   RAP1 interacting factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press